RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 URI1O94763 535 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-212ENST00000554584 DENND2CQ68D51 928 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 FEZ2Q9UHY8 353 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-212ENST00000554584 MAP3K2Q9Y2U5 619 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 FAM169AQ9Y6X4 670 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 KRT5P13647 590 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 ST13P5Q8NFI4 369 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-212ENST00000554584 KCNG4Q8TDN1 519 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 KIFC2Q96AC6 838 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 STX8Q9UNK0 236 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 PDE6BP35913 854 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 PHF8Q9UPP1 1060 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 ANKRD30AQ9BXX3 1397 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 A0A1W2PRG0 241 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 TRIM14Q14142 442 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 ZNF710Q8N1W2 664 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 ATRIPQ8WXE1 791 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 RPS6KC1Q96S38 1066 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 NUP88Q99567 741 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-212ENST00000554584 A0A087WZG4 1122 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 CCDC169A6NNP5 214 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 CDC45O75419 566 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 RRAGBQ5VZM2 374 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 SSFA2P28290 1259 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 LIG3P49916 1009 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 C20orf194Q5TEA3 1177 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 MPP4Q96JB8 637 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 TRIM31Q9BZY9 425 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 KIF4AO95239 1232 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 DZIP3Q86Y13 1208 aaKnown RBP3.74□□□□□ -1.81
SYNE2-212ENST00000554584 NUDT16Q96DE0 195 aaKnown RBP3.74□□□□□ -1.81
SYNE2-212ENST00000554584 FAM167BQ9BTA0 163 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 NIP7Q9Y221 180 aaKnown RBP eCLIP3.74□□□□□ -1.81
SYNE2-212ENST00000554584 TMCO3Q6UWJ1 677 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 MGARPQ8TDB4 240 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 ERC2O15083 957 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 CALML3P27482 149 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 SCYL1Q96KG9 808 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 OATP04181 439 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 CACUL1Q86Y37 369 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 KIAA0825Q8IV33 1275 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 MRPL46Q9H2W6 279 aaKnown RBP3.74□□□□□ -1.81
SYNE2-212ENST00000554584 HYPKQ9NX55 129 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 SMTNL1A8MU46 457 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 TRIM32Q13049 653 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 MARCKSP29966 332 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-212ENST00000554584 SMYD2Q9NRG4 433 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 TTC22Q5TAA0 569 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 ZNF318Q5VUA4 2279 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 CDR2Q01850 454 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 ADCY1Q08828 1119 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 SPA17Q15506 151 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 KRT27Q7Z3Y8 459 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 NBPF11Q86T75 865 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 CHAMP1Q96JM3 812 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 ANAPC4Q9UJX5 808 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 CD19P15391 556 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 OSTNP61366 133 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 LZTFL1Q9NQ48 299 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 SLC4A4Q9Y6R1 1079 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 MCM7P33993 719 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 LARGE2Q8N3Y3 721 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 PRPF31Q8WWY3 499 aaKnown RBP3.74□□□□□ -1.81
SYNE2-212ENST00000554584 FAM193BQ96PV7 902 aaPredicted RBP3.74□□□□□ -1.81
SYNE2-212ENST00000554584 ARMT1Q9H993 441 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 BTG4Q9NY30 223 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 HACD3Q9P035 362 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 MAPK8IP1Q9UQF2 711 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 PRR23AA6NEV1 266 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 NLRP13Q86W25 1043 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 CCDC114Q96M63 670 aa3.74□□□□□ -1.81
SYNE2-212ENST00000554584 KIF5BP33176 963 aa3.73□□□□□ -1.81
SYNE2-212ENST00000554584 SNX16P57768 344 aa3.73□□□□□ -1.81
SYNE2-212ENST00000554584 CTDSPL2Q05D32 466 aa3.73□□□□□ -1.81
SYNE2-212ENST00000554584 RDH13Q8NBN7 331 aa3.73□□□□□ -1.81
SYNE2-212ENST00000554584 CASC4Q6P4E1 433 aa3.73□□□□□ -1.81
SYNE2-212ENST00000554584 ADAT2Q7Z6V5 191 aaKnown RBP3.73□□□□□ -1.81
SYNE2-212ENST00000554584 DDX27Q96GQ7 796 aaKnown RBP3.73□□□□□ -1.81
SYNE2-212ENST00000554584 NDE1Q9NXR1 346 aa3.73□□□□□ -1.81
SYNE2-212ENST00000554584 NFKBIL1Q9UBC1 381 aaPredicted RBP3.73□□□□□ -1.81
SYNE2-212ENST00000554584 ACTN2P35609 894 aa3.73□□□□□ -1.81
SYNE2-212ENST00000554584 CCDC84Q86UT8 332 aaPredicted RBP3.73□□□□□ -1.81
SYNE2-212ENST00000554584 TMEM57Q8N5G2 664 aa3.73□□□□□ -1.81
SYNE2-212ENST00000554584 N6AMT1Q9Y5N5 214 aa3.73□□□□□ -1.81
SYNE2-212ENST00000554584 CASTP20810 708 aaKnown RBP3.73□□□□□ -1.81
SYNE2-212ENST00000554584 GTF2A1P52655 376 aaPredicted RBP3.73□□□□□ -1.81
SYNE2-212ENST00000554584 FAM47AQ5JRC9 791 aa3.73□□□□□ -1.81
SYNE2-212ENST00000554584 EVI5LQ96CN4 794 aa3.73□□□□□ -1.81
SYNE2-212ENST00000554584 CCDC194A0A1B0GVG4 234 aa3.73□□□□□ -1.81
SYNE2-212ENST00000554584 FAM196BA6NMK8 535 aa3.73□□□□□ -1.81
SYNE2-212ENST00000554584 UPP2O95045 317 aa3.73□□□□□ -1.81
SYNE2-212ENST00000554584 MYL3P08590 195 aa3.73□□□□□ -1.81
SYNE2-212ENST00000554584 CACNB1Q02641 598 aaPredicted RBP3.73□□□□□ -1.81
SYNE2-212ENST00000554584 SRCIN1Q9C0H9 1055 aa3.73□□□□□ -1.81
SYNE2-212ENST00000554584 EXOC1Q9NV70 894 aa3.73□□□□□ -1.81
SYNE2-212ENST00000554584 KNTC1P50748 2209 aa3.73□□□□□ -1.81
SYNE2-212ENST00000554584 DYNC1I1O14576 645 aa3.73□□□□□ -1.81
SYNE2-212ENST00000554584 GOLGA8HP0CJ92 632 aa3.73□□□□□ -1.81
SYNE2-212ENST00000554584 XPAP23025 273 aaPredicted RBP3.73□□□□□ -1.81
SYNE2-212ENST00000554584 CENPAP49450 140 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms