RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 SURF6O75683 361 aaKnown RBP28.8■■■□□ 2.2
NEK9-203ENST00000553945 APLP1P51693 650 aa28.8■■■□□ 2.2
NEK9-203ENST00000553945 RRP1P56182 461 aaKnown RBP28.8■■■□□ 2.2
NEK9-203ENST00000553945 OS9Q13438 667 aaPredicted RBP28.8■■■□□ 2.2
NEK9-203ENST00000553945 OGFOD1Q8N543 542 aa28.8■■■□□ 2.2
NEK9-203ENST00000553945 MYOZ2Q9NPC6 264 aa28.8■■■□□ 2.2
NEK9-203ENST00000553945 ITGBL1O95965 494 aaPredicted RBP28.79■■■□□ 2.2
NEK9-203ENST00000553945 CERS5Q8N5B7 392 aa28.79■■■□□ 2.2
NEK9-203ENST00000553945 ZC3H15Q8WU90 426 aaKnown RBP28.79■■■□□ 2.2
NEK9-203ENST00000553945 PGAP2Q9UHJ9 254 aa28.79■■■□□ 2.2
NEK9-203ENST00000553945 AKAP2Q9Y2D5 859 aa28.79■■■□□ 2.2
NEK9-203ENST00000553945 CEP350Q5VT06 3117 aa28.78■■■□□ 2.2
NEK9-203ENST00000553945 TIMM10P62072 90 aa28.78■■■□□ 2.2
NEK9-203ENST00000553945 CHAF1AQ13111 956 aaPredicted RBP28.78■■■□□ 2.2
NEK9-203ENST00000553945 ARAP2Q8WZ64 1704 aa28.77■■■□□ 2.2
NEK9-203ENST00000553945 FKBP1AP62942 108 aaKnown RBP28.77■■■□□ 2.2
NEK9-203ENST00000553945 HDAC9Q9UKV0 1011 aa28.77■■■□□ 2.2
NEK9-203ENST00000553945 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.77■■■□□ 2.2
NEK9-203ENST00000553945 PASKQ96RG2 1323 aa28.76■■■□□ 2.19
NEK9-203ENST00000553945 A0A1B0GUL7 405 aa28.76■■■□□ 2.19
NEK9-203ENST00000553945 F8W031 263 aaPredicted RBP28.76■■■□□ 2.19
NEK9-203ENST00000553945 ADORA1P30542 326 aa28.76■■■□□ 2.19
NEK9-203ENST00000553945 MMP14P50281 582 aa28.75■■■□□ 2.19
NEK9-203ENST00000553945 MFSD14BQ5SR56 506 aa28.75■■■□□ 2.19
NEK9-203ENST00000553945 RPAP2Q8IXW5 612 aaPredicted RBP28.75■■■□□ 2.19
NEK9-203ENST00000553945 NOP58Q9Y2X3 529 aaKnown RBP28.75■■■□□ 2.19
NEK9-203ENST00000553945 HTRA3P83110 453 aa28.74■■■□□ 2.19
NEK9-203ENST00000553945 SCARF1Q14162 830 aa28.74■■■□□ 2.19
NEK9-203ENST00000553945 NEUROD6Q96NK8 337 aa28.74■■■□□ 2.19
NEK9-203ENST00000553945 GLIS2Q9BZE0 524 aaPredicted RBP28.74■■■□□ 2.19
NEK9-203ENST00000553945 GNL3LQ9NVN8 582 aaKnown RBP28.74■■■□□ 2.19
NEK9-203ENST00000553945 MYH13Q9UKX3 1938 aa28.74■■■□□ 2.19
NEK9-203ENST00000553945 ASTN2O75129 1339 aaPredicted RBP28.73■■■□□ 2.19
NEK9-203ENST00000553945 PHKA1P46020 1223 aa28.73■■■□□ 2.19
NEK9-203ENST00000553945 TRAF5O00463 557 aa28.72■■■□□ 2.19
NEK9-203ENST00000553945 DCPSQ96C86 337 aaKnown RBP28.72■■■□□ 2.19
NEK9-203ENST00000553945 XAGE2Q96GT9 111 aa28.72■■■□□ 2.19
NEK9-203ENST00000553945 GGA3Q9NZ52 723 aa28.72■■■□□ 2.19
NEK9-203ENST00000553945 HMMRO75330 724 aa28.71■■■□□ 2.19
NEK9-203ENST00000553945 FMR1Q06787 632 aaKnown RBP eCLIP28.71■■■□□ 2.19
NEK9-203ENST00000553945 CDC37L1Q7L3B6 337 aa28.71■■■□□ 2.19
NEK9-203ENST00000553945 TBC1D22AQ8WUA7 517 aa28.71■■■□□ 2.19
NEK9-203ENST00000553945 NBPF9Q3BBW0 867 aa28.7■■■□□ 2.18
NEK9-203ENST00000553945 CCDC102BQ68D86 513 aa28.7■■■□□ 2.18
NEK9-203ENST00000553945 USP48Q86UV5 1035 aa28.7■■■□□ 2.18
NEK9-203ENST00000553945 SIRT2Q8IXJ6 389 aa28.7■■■□□ 2.18
NEK9-203ENST00000553945 EXOC6BQ9Y2D4 811 aa28.7■■■□□ 2.18
NEK9-203ENST00000553945 GORABQ5T7V8 394 aa28.69■■■□□ 2.18
NEK9-203ENST00000553945 ANGEL2Q5VTE6 544 aaKnown RBP28.69■■■□□ 2.18
NEK9-203ENST00000553945 TTF2Q9UNY4 1162 aaKnown RBP28.69■■■□□ 2.18
NEK9-203ENST00000553945 POLR2AP24928 1970 aaKnown RBP28.68■■■□□ 2.18
NEK9-203ENST00000553945 DLGAP5Q15398 846 aa28.68■■■□□ 2.18
NEK9-203ENST00000553945 KRT26Q7Z3Y9 468 aa28.68■■■□□ 2.18
NEK9-203ENST00000553945 GPR108Q9NPR9 543 aa28.68■■■□□ 2.18
NEK9-203ENST00000553945 COL1A1P02452 1464 aaPredicted RBP28.67■■■□□ 2.18
NEK9-203ENST00000553945 WNT10BO00744 389 aa28.67■■■□□ 2.18
NEK9-203ENST00000553945 GRIK5Q16478 980 aa28.67■■■□□ 2.18
NEK9-203ENST00000553945 TNNI3KQ59H18 835 aa28.67■■■□□ 2.18
NEK9-203ENST00000553945 DENND2AQ9ULE3 1009 aa28.67■■■□□ 2.18
NEK9-203ENST00000553945 FPGT-TNNI3KV9GXZ4 949 aa28.67■■■□□ 2.18
NEK9-203ENST00000553945 TMEM88BA6NKF7 163 aa28.66■■■□□ 2.18
NEK9-203ENST00000553945 ADM5C9JUS6 153 aa28.66■■■□□ 2.18
NEK9-203ENST00000553945 SEMA3EO15041 775 aa28.66■■■□□ 2.18
NEK9-203ENST00000553945 CFAP100Q494V2 611 aa28.66■■■□□ 2.18
NEK9-203ENST00000553945 HSP90AB4PQ58FF6 505 aa28.66■■■□□ 2.18
NEK9-203ENST00000553945 ERC1Q8IUD2 1116 aa28.66■■■□□ 2.18
NEK9-203ENST00000553945 SULF1Q8IWU6 871 aa28.66■■■□□ 2.18
NEK9-203ENST00000553945 WDR66Q8TBY9 1149 aa28.66■■■□□ 2.18
NEK9-203ENST00000553945 CREBZFQ9NS37 354 aa28.66■■■□□ 2.18
NEK9-203ENST00000553945 TRPM7Q96QT4 1865 aa28.66■■■□□ 2.18
NEK9-203ENST00000553945 RBM5P52756 815 aaKnown RBP eCLIP28.65■■■□□ 2.18
NEK9-203ENST00000553945 PCDHAC2Q9Y5I4 1007 aa28.65■■■□□ 2.18
NEK9-203ENST00000553945 DLK2Q6UY11 383 aa28.64■■■□□ 2.18
NEK9-203ENST00000553945 MTMR14Q8NCE2 650 aa28.64■■■□□ 2.18
NEK9-203ENST00000553945 ZBED3Q96IU2 234 aaPredicted RBP28.64■■■□□ 2.18
NEK9-203ENST00000553945 CRBNQ96SW2 442 aa28.64■■■□□ 2.18
NEK9-203ENST00000553945 PITPNM2Q9BZ72 1349 aa28.64■■■□□ 2.17
NEK9-203ENST00000553945 ZNF408Q9H9D4 720 aa28.63■■■□□ 2.17
NEK9-203ENST00000553945 APBB1O00213 710 aa28.62■■■□□ 2.17
NEK9-203ENST00000553945 RASGRF1Q13972 1273 aa28.62■■■□□ 2.17
NEK9-203ENST00000553945 DBNDD2Q9BQY9 259 aa28.62■■■□□ 2.17
NEK9-203ENST00000553945 SERPINA10Q9UK55 444 aa28.62■■■□□ 2.17
NEK9-203ENST00000553945 SCAF8Q9UPN6 1271 aaKnown RBP28.62■■■□□ 2.17
NEK9-203ENST00000553945 SPDYE2BA6NHP3 402 aa28.61■■■□□ 2.17
NEK9-203ENST00000553945 CELF2O95319 508 aaKnown RBP28.61■■■□□ 2.17
NEK9-203ENST00000553945 SPDYE6P0CI01 402 aa28.61■■■□□ 2.17
NEK9-203ENST00000553945 CST9Q5W186 159 aa28.61■■■□□ 2.17
NEK9-203ENST00000553945 PRMT6Q96LA8 375 aaPredicted RBP28.61■■■□□ 2.17
NEK9-203ENST00000553945 SUGT1Q9Y2Z0 365 aa28.61■■■□□ 2.17
NEK9-203ENST00000553945 ZBTB22O15209 634 aa28.6■■■□□ 2.17
NEK9-203ENST00000553945 CRKP46108 304 aa28.6■■■□□ 2.17
NEK9-203ENST00000553945 DNAJC5GQ8N7S2 189 aa28.6■■■□□ 2.17
NEK9-203ENST00000553945 CCDC8Q9H0W5 538 aaPredicted RBP28.6■■■□□ 2.17
NEK9-203ENST00000553945 ECM29Q5VYK3 1845 aa28.59■■■□□ 2.17
NEK9-203ENST00000553945 MYO1BO43795 1136 aa28.59■■■□□ 2.17
NEK9-203ENST00000553945 RHPN1Q8TCX5 695 aa28.59■■■□□ 2.17
NEK9-203ENST00000553945 EAF2Q96CJ1 260 aaPredicted RBP28.59■■■□□ 2.17
NEK9-203ENST00000553945 IL1RAPL2Q9NP60 686 aa28.59■■■□□ 2.17
NEK9-203ENST00000553945 MAST3O60307 1309 aa28.59■■■□□ 2.17
NEK9-203ENST00000553945 UQCRFS1P1P0C7P4 283 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms