RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 MXD3Q9BW11 206 aa8.16□□□□□ -1.1
FOXN3-205ENST00000553904 USP44Q9H0E7 712 aa8.16□□□□□ -1.1
FOXN3-205ENST00000553904 BICC1Q9H694 974 aaKnown RBP8.16□□□□□ -1.1
FOXN3-205ENST00000553904 SAGE1Q9NXZ1 904 aa8.16□□□□□ -1.1
FOXN3-205ENST00000553904 FBXO3Q9UK99 471 aa8.16□□□□□ -1.1
FOXN3-205ENST00000553904 FAM205AQ6ZU69 1335 aa8.15□□□□□ -1.1
FOXN3-205ENST00000553904 FAM155AB1AL88 458 aaPredicted RBP8.15□□□□□ -1.1
FOXN3-205ENST00000553904 UBTFL1P0CB47 393 aaPredicted RBP8.15□□□□□ -1.1
FOXN3-205ENST00000553904 DLK2Q6UY11 383 aa8.15□□□□□ -1.1
FOXN3-205ENST00000553904 ARHGAP45Q92619 1136 aa8.15□□□□□ -1.1
FOXN3-205ENST00000553904 CDCA7LQ96GN5 454 aa8.15□□□□□ -1.1
FOXN3-205ENST00000553904 FAM84BQ96KN1 310 aaPredicted RBP8.15□□□□□ -1.1
FOXN3-205ENST00000553904 DEFB129Q9H1M3 183 aa8.15□□□□□ -1.1
FOXN3-205ENST00000553904 SERPINA10Q9UK55 444 aa8.15□□□□□ -1.1
FOXN3-205ENST00000553904 TAF1P21675 1872 aa8.15□□□□□ -1.11
FOXN3-205ENST00000553904 ASTN2O75129 1339 aaPredicted RBP8.14□□□□□ -1.11
FOXN3-205ENST00000553904 F8W031 263 aaPredicted RBP8.14□□□□□ -1.11
FOXN3-205ENST00000553904 UBE2Q2LH0YL09 131 aa8.14□□□□□ -1.11
FOXN3-205ENST00000553904 SNAP23O00161 211 aa8.14□□□□□ -1.11
FOXN3-205ENST00000553904 SLC10A3P09131 477 aa8.14□□□□□ -1.11
FOXN3-205ENST00000553904 KLRK1P26718 216 aa8.14□□□□□ -1.11
FOXN3-205ENST00000553904 TNNI2P48788 182 aa8.14□□□□□ -1.11
FOXN3-205ENST00000553904 HDLBPQ00341 1268 aaKnown RBP8.14□□□□□ -1.11
FOXN3-205ENST00000553904 SREBF2Q12772 1141 aa8.14□□□□□ -1.11
FOXN3-205ENST00000553904 CFAP100Q494V2 611 aa8.14□□□□□ -1.11
FOXN3-205ENST00000553904 MFSD14BQ5SR56 506 aa8.14□□□□□ -1.11
FOXN3-205ENST00000553904 FBXO33Q7Z6M2 555 aa8.14□□□□□ -1.11
FOXN3-205ENST00000553904 SLC10A4Q96EP9 437 aa8.14□□□□□ -1.11
FOXN3-205ENST00000553904 KAZALD1Q96I82 304 aa8.14□□□□□ -1.11
FOXN3-205ENST00000553904 ZBED3Q96IU2 234 aaPredicted RBP8.14□□□□□ -1.11
FOXN3-205ENST00000553904 CSRNP1Q96S65 589 aa8.14□□□□□ -1.11
FOXN3-205ENST00000553904 MRIQ9BWK5 157 aa8.14□□□□□ -1.11
FOXN3-205ENST00000553904 GNL3LQ9NVN8 582 aaKnown RBP8.14□□□□□ -1.11
FOXN3-205ENST00000553904 NOB1Q9ULX3 412 aaKnown RBP8.14□□□□□ -1.11
FOXN3-205ENST00000553904 SUGT1Q9Y2Z0 365 aa8.14□□□□□ -1.11
FOXN3-205ENST00000553904 CACNA1FO60840 1977 aa8.13□□□□□ -1.11
FOXN3-205ENST00000553904 KIF16BQ96L93 1317 aa8.13□□□□□ -1.11
FOXN3-205ENST00000553904 SPDYE2BA6NHP3 402 aa8.13□□□□□ -1.11
FOXN3-205ENST00000553904 EYA2O00167 538 aa8.13□□□□□ -1.11
FOXN3-205ENST00000553904 TRPA1O75762 1119 aa8.13□□□□□ -1.11
FOXN3-205ENST00000553904 ALDH1A1P00352 501 aa8.13□□□□□ -1.11
FOXN3-205ENST00000553904 GNAI3P08754 354 aa8.13□□□□□ -1.11
FOXN3-205ENST00000553904 SPDYE6P0CI01 402 aa8.13□□□□□ -1.11
FOXN3-205ENST00000553904 SLC5A1P13866 664 aa8.13□□□□□ -1.11
FOXN3-205ENST00000553904 GYG1P46976 350 aa8.13□□□□□ -1.11
FOXN3-205ENST00000553904 IREB2P48200 963 aaKnown RBP8.13□□□□□ -1.11
FOXN3-205ENST00000553904 PUM3Q15397 648 aaKnown RBP8.13□□□□□ -1.11
FOXN3-205ENST00000553904 PRAMEF18Q5VWM3 479 aa8.13□□□□□ -1.11
FOXN3-205ENST00000553904 WDR66Q8TBY9 1149 aa8.13□□□□□ -1.11
FOXN3-205ENST00000553904 LPIN2Q92539 896 aa8.13□□□□□ -1.11
FOXN3-205ENST00000553904 HOOK2Q96ED9 719 aa8.13□□□□□ -1.11
FOXN3-205ENST00000553904 PRMT6Q96LA8 375 aaPredicted RBP8.13□□□□□ -1.11
FOXN3-205ENST00000553904 PUS3Q9BZE2 481 aaKnown RBP8.13□□□□□ -1.11
FOXN3-205ENST00000553904 RNF186Q9NXI6 227 aa8.13□□□□□ -1.11
FOXN3-205ENST00000553904 CEP126Q9P2H0 1117 aa8.13□□□□□ -1.11
FOXN3-205ENST00000553904 TTF2Q9UNY4 1162 aaKnown RBP8.13□□□□□ -1.11
FOXN3-205ENST00000553904 COL4A1P02462 1669 aa8.12□□□□□ -1.11
FOXN3-205ENST00000553904 MAST3O60307 1309 aa8.12□□□□□ -1.11
FOXN3-205ENST00000553904 IRS2Q9Y4H2 1338 aa8.12□□□□□ -1.11
FOXN3-205ENST00000553904 CIAO1O76071 339 aa8.12□□□□□ -1.11
FOXN3-205ENST00000553904 TM4SF4P48230 202 aa8.12□□□□□ -1.11
FOXN3-205ENST00000553904 RARSP54136 660 aaKnown RBP8.12□□□□□ -1.11
FOXN3-205ENST00000553904 LRRC24Q50LG9 513 aa8.12□□□□□ -1.11
FOXN3-205ENST00000553904 OTUD7BQ6GQQ9 843 aa8.12□□□□□ -1.11
FOXN3-205ENST00000553904 RASAL3Q86YV0 1011 aa8.12□□□□□ -1.11
FOXN3-205ENST00000553904 CERS5Q8N5B7 392 aa8.12□□□□□ -1.11
FOXN3-205ENST00000553904 ANKRD44Q8N8A2 993 aa8.12□□□□□ -1.11
FOXN3-205ENST00000553904 ABHD8Q96I13 439 aa8.12□□□□□ -1.11
FOXN3-205ENST00000553904 VEZTQ9HBM0 779 aa8.12□□□□□ -1.11
FOXN3-205ENST00000553904 TMOD2Q9NZR1 351 aa8.12□□□□□ -1.11
FOXN3-205ENST00000553904 TSKSQ9UJT2 592 aa8.12□□□□□ -1.11
FOXN3-205ENST00000553904 ANGEL1Q9UNK9 670 aaKnown RBP8.12□□□□□ -1.11
FOXN3-205ENST00000553904 AKAP2Q9Y2D5 859 aa8.12□□□□□ -1.11
FOXN3-205ENST00000553904 TRPM7Q96QT4 1865 aa8.11□□□□□ -1.11
FOXN3-205ENST00000553904 CLRN2A0PK11 232 aa8.11□□□□□ -1.11
FOXN3-205ENST00000553904 MANSC4A6NHS7 340 aaPredicted RBP8.11□□□□□ -1.11
FOXN3-205ENST00000553904 CCDC85CA6NKD9 419 aa8.11□□□□□ -1.11
FOXN3-205ENST00000553904 IL15P40933 162 aaPredicted RBP8.11□□□□□ -1.11
FOXN3-205ENST00000553904 CRKP46108 304 aa8.11□□□□□ -1.11
FOXN3-205ENST00000553904 PTPN12Q05209 780 aaKnown RBP8.11□□□□□ -1.11
FOXN3-205ENST00000553904 DGKZQ13574 1117 aa8.11□□□□□ -1.11
FOXN3-205ENST00000553904 PRKG1Q13976 671 aa8.11□□□□□ -1.11
FOXN3-205ENST00000553904 RASA3Q14644 834 aa8.11□□□□□ -1.11
FOXN3-205ENST00000553904 PKN2Q16513 984 aaKnown RBP8.11□□□□□ -1.11
FOXN3-205ENST00000553904 MAP3K11Q16584 847 aa8.11□□□□□ -1.11
FOXN3-205ENST00000553904 LDLRAD1Q5T700 205 aa8.11□□□□□ -1.11
FOXN3-205ENST00000553904 INTS3Q68E01 1043 aaKnown RBP8.11□□□□□ -1.11
FOXN3-205ENST00000553904 DZIP1LQ8IYY4 767 aaKnown RBP8.11□□□□□ -1.11
FOXN3-205ENST00000553904 ANKRD13AQ8IZ07 590 aa8.11□□□□□ -1.11
FOXN3-205ENST00000553904 TEKT1Q969V4 418 aa8.11□□□□□ -1.11
FOXN3-205ENST00000553904 ZIC5Q96T25 663 aa8.11□□□□□ -1.11
FOXN3-205ENST00000553904 ZNF70Q9UC06 446 aaPredicted RBP8.11□□□□□ -1.11
FOXN3-205ENST00000553904 COL1A1P02452 1464 aaPredicted RBP8.11□□□□□ -1.11
FOXN3-205ENST00000553904 SEMA3EO15041 775 aa8.1□□□□□ -1.11
FOXN3-205ENST00000553904 WDHD1O75717 1129 aaPredicted RBP8.1□□□□□ -1.11
FOXN3-205ENST00000553904 ZBTB48P10074 688 aaPredicted RBP8.1□□□□□ -1.11
FOXN3-205ENST00000553904 BCAMP50895 628 aa8.1□□□□□ -1.11
FOXN3-205ENST00000553904 CHAF1AQ13111 956 aaPredicted RBP8.1□□□□□ -1.11
FOXN3-205ENST00000553904 SPDYE2Q495Y8 402 aa8.1□□□□□ -1.11
FOXN3-205ENST00000553904 NOM1Q5C9Z4 860 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms