RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 HIBADHP31937 336 aaKnown RBP16.95■□□□□ 0.3
ABCD4-219ENST00000553745 CWC27Q6UX04 472 aaKnown RBP16.95■□□□□ 0.3
ABCD4-219ENST00000553745 DPP8Q6V1X1 898 aaPredicted RBP16.95■□□□□ 0.3
ABCD4-219ENST00000553745 C15orf52Q6ZUT6 534 aaKnown RBP16.95■□□□□ 0.3
ABCD4-219ENST00000553745 KLHL34Q8N239 644 aa16.95■□□□□ 0.3
ABCD4-219ENST00000553745 MPNDQ8N594 471 aa16.95■□□□□ 0.3
ABCD4-219ENST00000553745 GNL3LQ9NVN8 582 aaKnown RBP16.95■□□□□ 0.3
ABCD4-219ENST00000553745 PPP1R1BQ9UD71 204 aaPredicted RBP16.95■□□□□ 0.3
ABCD4-219ENST00000553745 CIZ1Q9ULV3 898 aaPredicted RBP16.95■□□□□ 0.3
ABCD4-219ENST00000553745 C6orf229H3BNL8 230 aa16.94■□□□□ 0.3
ABCD4-219ENST00000553745 REC8O95072 547 aa16.94■□□□□ 0.3
ABCD4-219ENST00000553745 TGFB2P61812 414 aa16.94■□□□□ 0.3
ABCD4-219ENST00000553745 TTLL6Q8N841 843 aa16.94■□□□□ 0.3
ABCD4-219ENST00000553745 FAM227BQ96M60 508 aa16.94■□□□□ 0.3
ABCD4-219ENST00000553745 TMX4Q9H1E5 349 aaPredicted RBP16.94■□□□□ 0.3
ABCD4-219ENST00000553745 PIH1D3Q9NQM4 214 aaKnown RBP16.94■□□□□ 0.3
ABCD4-219ENST00000553745 MAST2Q6P0Q8 1798 aa16.94■□□□□ 0.3
ABCD4-219ENST00000553745 HIP1O00291 1037 aa16.94■□□□□ 0.3
ABCD4-219ENST00000553745 MCM4P33991 863 aa16.94■□□□□ 0.3
ABCD4-219ENST00000553745 NMIQ13287 307 aaPredicted RBP16.94■□□□□ 0.3
ABCD4-219ENST00000553745 C7orf43Q8WVR3 580 aa16.94■□□□□ 0.3
ABCD4-219ENST00000553745 CHD4Q14839 1912 aa16.94■□□□□ 0.3
ABCD4-219ENST00000553745 A0A0D9SFI3 127 aa16.93■□□□□ 0.3
ABCD4-219ENST00000553745 ZNF804AQ7Z570 1209 aa16.93■□□□□ 0.3
ABCD4-219ENST00000553745 SGSM2O43147 1006 aa16.92■□□□□ 0.3
ABCD4-219ENST00000553745 C21orf2O43822 256 aa16.92■□□□□ 0.3
ABCD4-219ENST00000553745 TTF1Q15361 905 aaPredicted RBP16.92■□□□□ 0.3
ABCD4-219ENST00000553745 SLFNL1Q499Z3 407 aa16.92■□□□□ 0.3
ABCD4-219ENST00000553745 SPON1Q9HCB6 807 aa16.92■□□□□ 0.3
ABCD4-219ENST00000553745 DENND2AQ9ULE3 1009 aa16.92■□□□□ 0.3
ABCD4-219ENST00000553745 CCDC88AQ3V6T2 1871 aa16.92■□□□□ 0.3
ABCD4-219ENST00000553745 SEMA3EO15041 775 aa16.92■□□□□ 0.3
ABCD4-219ENST00000553745 WWC3Q9ULE0 1092 aa16.92■□□□□ 0.3
ABCD4-219ENST00000553745 CD2APQ9Y5K6 639 aa16.92■□□□□ 0.3
ABCD4-219ENST00000553745 RAD50Q92878 1312 aa16.91■□□□□ 0.3
ABCD4-219ENST00000553745 RUFY2Q8WXA3 655 aa16.91■□□□□ 0.3
ABCD4-219ENST00000553745 PDS5AQ29RF7 1337 aaKnown RBP16.91■□□□□ 0.3
ABCD4-219ENST00000553745 RIMBP2O15034 1052 aa16.9■□□□□ 0.3
ABCD4-219ENST00000553745 IDH1O75874 414 aaKnown RBP16.9■□□□□ 0.3
ABCD4-219ENST00000553745 TDRD7Q8NHU6 1098 aaKnown RBP16.9■□□□□ 0.3
ABCD4-219ENST00000553745 PIM2Q9P1W9 311 aa16.9■□□□□ 0.3
ABCD4-219ENST00000553745 ZNF646O15015 1829 aaPredicted RBP16.9■□□□□ 0.3
ABCD4-219ENST00000553745 ARFGEF1Q9Y6D6 1849 aa16.9■□□□□ 0.3
ABCD4-219ENST00000553745 FER1L6Q2WGJ9 1857 aa16.9■□□□□ 0.3
ABCD4-219ENST00000553745 RNF113AO15541 343 aaKnown RBP16.89■□□□□ 0.3
ABCD4-219ENST00000553745 CHAF1AQ13111 956 aaPredicted RBP16.89■□□□□ 0.3
ABCD4-219ENST00000553745 SEC62Q99442 399 aaKnown RBP16.89■□□□□ 0.3
ABCD4-219ENST00000553745 CD209Q9NNX6 404 aa16.89■□□□□ 0.3
ABCD4-219ENST00000553745 ANO2Q9NQ90 1003 aa16.89■□□□□ 0.3
ABCD4-219ENST00000553745 JAG2Q9Y219 1238 aa16.89■□□□□ 0.3
ABCD4-219ENST00000553745 SOCS7O14512 581 aa16.89■□□□□ 0.29
ABCD4-219ENST00000553745 ZBTB22O15209 634 aa16.89■□□□□ 0.29
ABCD4-219ENST00000553745 RAB3GAP1Q15042 981 aa16.89■□□□□ 0.29
ABCD4-219ENST00000553745 CCDC93Q567U6 631 aa16.89■□□□□ 0.29
ABCD4-219ENST00000553745 ZMYM1Q5SVZ6 1142 aa16.89■□□□□ 0.29
ABCD4-219ENST00000553745 CC2D2BQ6DHV5 1058 aa16.89■□□□□ 0.29
ABCD4-219ENST00000553745 ZNF589Q86UQ0 364 aaPredicted RBP16.89■□□□□ 0.29
ABCD4-219ENST00000553745 TICAM2Q86XR7 235 aa16.89■□□□□ 0.29
ABCD4-219ENST00000553745 RTFDC1Q9BY42 306 aaPredicted RBP16.89■□□□□ 0.29
ABCD4-219ENST00000553745 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.89■□□□□ 0.299e-7■■■□□ 18.5
ABCD4-219ENST00000553745 IL1R1P14778 569 aa16.88■□□□□ 0.29
ABCD4-219ENST00000553745 ADD2P35612 726 aa16.88■□□□□ 0.29
ABCD4-219ENST00000553745 WASHC4Q2M389 1173 aa16.88■□□□□ 0.29
ABCD4-219ENST00000553745 LRRFIP1Q32MZ4 808 aaKnown RBP16.88■□□□□ 0.29
ABCD4-219ENST00000553745 NLGN2Q8NFZ4 835 aa16.88■□□□□ 0.29
ABCD4-219ENST00000553745 IL17RAQ96F46 866 aa16.88■□□□□ 0.29
ABCD4-219ENST00000553745 EYA3Q99504 573 aa16.88■□□□□ 0.29
ABCD4-219ENST00000553745 ZC3H12CQ9C0D7 883 aaKnown RBP16.88■□□□□ 0.29
ABCD4-219ENST00000553745 ABCF2Q9UG63 623 aa16.88■□□□□ 0.29
ABCD4-219ENST00000553745 MAST3O60307 1309 aa16.88■□□□□ 0.29
ABCD4-219ENST00000553745 SCN9AQ15858 1988 aa16.87■□□□□ 0.29
ABCD4-219ENST00000553745 ZFYP08048 801 aaPredicted RBP16.87■□□□□ 0.29
ABCD4-219ENST00000553745 CCDC129Q6ZRS4 1044 aa16.87■□□□□ 0.29
ABCD4-219ENST00000553745 PDE6AP16499 860 aa16.87■□□□□ 0.29
ABCD4-219ENST00000553745 MCMDC2Q4G0Z9 681 aa16.87■□□□□ 0.29
ABCD4-219ENST00000553745 DALRD3Q5D0E6 543 aaKnown RBP16.87■□□□□ 0.29
ABCD4-219ENST00000553745 SLC9C2Q5TAH2 1124 aa16.87■□□□□ 0.29
ABCD4-219ENST00000553745 ZSCAN25Q6NSZ9 544 aa16.87■□□□□ 0.29
ABCD4-219ENST00000553745 LSG1Q9H089 658 aaKnown RBP16.87■□□□□ 0.29
ABCD4-219ENST00000553745 LRP2BPQ9P2M1 347 aa16.87■□□□□ 0.29
ABCD4-219ENST00000553745 M0R2C6 588 aa16.86■□□□□ 0.29
ABCD4-219ENST00000553745 EPB41L2O43491 1005 aaKnown RBP16.86■□□□□ 0.29
ABCD4-219ENST00000553745 MAP3K12Q12852 859 aa16.86■□□□□ 0.29
ABCD4-219ENST00000553745 APPBP2Q92624 585 aa16.86■□□□□ 0.29
ABCD4-219ENST00000553745 TNPO1Q92973 898 aaKnown RBP16.86■□□□□ 0.29
ABCD4-219ENST00000553745 OSBP2Q969R2 916 aa16.86■□□□□ 0.29
ABCD4-219ENST00000553745 COA1Q9GZY4 146 aa16.86■□□□□ 0.29
ABCD4-219ENST00000553745 HELLSQ9NRZ9 838 aa16.86■□□□□ 0.29
ABCD4-219ENST00000553745 ZNF532Q9HCE3 1301 aa16.86■□□□□ 0.29
ABCD4-219ENST00000553745 PSME4Q14997 1843 aa16.86■□□□□ 0.29
ABCD4-219ENST00000553745 TCRBV5S4A2TA0A5A2 114 aa16.85■□□□□ 0.29
ABCD4-219ENST00000553745 DOK7Q18PE1 504 aa16.85■□□□□ 0.29
ABCD4-219ENST00000553745 CCDC171Q6TFL3 1326 aa16.85■□□□□ 0.29
ABCD4-219ENST00000553745 MAGEB6Q8N7X4 407 aa16.85■□□□□ 0.29
ABCD4-219ENST00000553745 SALL1Q9NSC2 1324 aa16.84■□□□□ 0.29
ABCD4-219ENST00000553745 PRDX5P30044 214 aa16.84■□□□□ 0.29
ABCD4-219ENST00000553745 PTH1RQ03431 593 aa16.84■□□□□ 0.29
ABCD4-219ENST00000553745 UBE3CQ15386 1083 aa16.84■□□□□ 0.29
ABCD4-219ENST00000553745 AOC3Q16853 763 aa16.84■□□□□ 0.29
ABCD4-219ENST00000553745 GRIPAP1Q4V328 841 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms