RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 CAPN15O75808 1086 aa14.69□□□□□ -0.06
TMEM253-202ENST00000553744 ZNF280AP59817 542 aaPredicted RBP14.69□□□□□ -0.06
TMEM253-202ENST00000553744 FKBP1AP62942 108 aaKnown RBP14.69□□□□□ -0.06
TMEM253-202ENST00000553744 OS9Q13438 667 aaPredicted RBP14.69□□□□□ -0.06
TMEM253-202ENST00000553744 CLEC11AQ9Y240 323 aa14.69□□□□□ -0.06
TMEM253-202ENST00000553744 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.69□□□□□ -0.06
TMEM253-202ENST00000553744 A0A1B0GUL7 405 aa14.68□□□□□ -0.06
TMEM253-202ENST00000553744 HMMRO75330 724 aa14.68□□□□□ -0.06
TMEM253-202ENST00000553744 USP17L8P0C7I0 530 aa14.68□□□□□ -0.06
TMEM253-202ENST00000553744 SAMD7Q7Z3H4 446 aa14.68□□□□□ -0.06
TMEM253-202ENST00000553744 SIRT2Q8IXJ6 389 aa14.68□□□□□ -0.06
TMEM253-202ENST00000553744 TNS4Q8IZW8 715 aa14.68□□□□□ -0.06
TMEM253-202ENST00000553744 CERS5Q8N5B7 392 aa14.68□□□□□ -0.06
TMEM253-202ENST00000553744 IQSEC3Q9UPP2 1182 aaPredicted RBP14.68□□□□□ -0.06
TMEM253-202ENST00000553744 JAG2Q9Y219 1238 aa14.68□□□□□ -0.06
TMEM253-202ENST00000553744 FRAT2O75474 233 aaPredicted RBP14.67□□□□□ -0.06
TMEM253-202ENST00000553744 EGFRP00533 1210 aa14.67□□□□□ -0.06
TMEM253-202ENST00000553744 ADORA1P30542 326 aa14.67□□□□□ -0.06
TMEM253-202ENST00000553744 HIRAP54198 1017 aaPredicted RBP14.67□□□□□ -0.06
TMEM253-202ENST00000553744 KIF4BQ2VIQ3 1234 aa14.67□□□□□ -0.06
TMEM253-202ENST00000553744 TBC1D10BQ4KMP7 808 aaPredicted RBP14.67□□□□□ -0.06
TMEM253-202ENST00000553744 COL1A1P02452 1464 aaPredicted RBP14.66□□□□□ -0.06
TMEM253-202ENST00000553744 PHKA1P46020 1223 aa14.66□□□□□ -0.06
TMEM253-202ENST00000553744 MMP14P50281 582 aa14.66□□□□□ -0.06
TMEM253-202ENST00000553744 TIMM10P62072 90 aa14.66□□□□□ -0.06
TMEM253-202ENST00000553744 MFSD14BQ5SR56 506 aa14.66□□□□□ -0.06
TMEM253-202ENST00000553744 KIAA0825Q8IV33 1275 aa14.66□□□□□ -0.06
TMEM253-202ENST00000553744 OGFOD1Q8N543 542 aa14.66□□□□□ -0.06
TMEM253-202ENST00000553744 ZC3H15Q8WU90 426 aaKnown RBP14.66□□□□□ -0.06
TMEM253-202ENST00000553744 XAGE2Q96GT9 111 aa14.66□□□□□ -0.06
TMEM253-202ENST00000553744 CRBNQ96SW2 442 aa14.66□□□□□ -0.06
TMEM253-202ENST00000553744 MYOZ2Q9NPC6 264 aa14.66□□□□□ -0.06
TMEM253-202ENST00000553744 GPR108Q9NPR9 543 aa14.66□□□□□ -0.06
TMEM253-202ENST00000553744 EXOC6BQ9Y2D4 811 aa14.66□□□□□ -0.06
TMEM253-202ENST00000553744 ZBTB22O15209 634 aa14.65□□□□□ -0.06
TMEM253-202ENST00000553744 CHAF1AQ13111 956 aaPredicted RBP14.65□□□□□ -0.06
TMEM253-202ENST00000553744 HSP90AB4PQ58FF6 505 aa14.65□□□□□ -0.06
TMEM253-202ENST00000553744 TNNI3KQ59H18 835 aa14.65□□□□□ -0.06
TMEM253-202ENST00000553744 RBM26Q5T8P6 1007 aaKnown RBP14.65□□□□□ -0.06
TMEM253-202ENST00000553744 MAP1SQ66K74 1059 aaPredicted RBP14.65□□□□□ -0.06
TMEM253-202ENST00000553744 CCDC102BQ68D86 513 aa14.65□□□□□ -0.06
TMEM253-202ENST00000553744 ERC1Q8IUD2 1116 aa14.65□□□□□ -0.06
TMEM253-202ENST00000553744 TBC1D22AQ8WUA7 517 aa14.65□□□□□ -0.06
TMEM253-202ENST00000553744 NEUROD6Q96NK8 337 aa14.65□□□□□ -0.06
TMEM253-202ENST00000553744 GNL3LQ9NVN8 582 aaKnown RBP14.65□□□□□ -0.06
TMEM253-202ENST00000553744 PGAP2Q9UHJ9 254 aa14.65□□□□□ -0.06
TMEM253-202ENST00000553744 HDAC9Q9UKV0 1011 aa14.65□□□□□ -0.06
TMEM253-202ENST00000553744 FPGT-TNNI3KV9GXZ4 949 aa14.65□□□□□ -0.06
TMEM253-202ENST00000553744 CNTROBQ8N137 903 aa14.64□□□□□ -0.07
TMEM253-202ENST00000553744 MYH13Q9UKX3 1938 aa14.64□□□□□ -0.07
TMEM253-202ENST00000553744 F8W031 263 aaPredicted RBP14.63□□□□□ -0.07
TMEM253-202ENST00000553744 SEMA3EO15041 775 aa14.63□□□□□ -0.07
TMEM253-202ENST00000553744 ITGBL1O95965 494 aaPredicted RBP14.63□□□□□ -0.07
TMEM253-202ENST00000553744 DENND2AQ9ULE3 1009 aa14.63□□□□□ -0.07
TMEM253-202ENST00000553744 SUPT16HQ9Y5B9 1047 aaKnown RBP14.63□□□□□ -0.07
TMEM253-202ENST00000553744 PASKQ96RG2 1323 aa14.63□□□□□ -0.07
TMEM253-202ENST00000553744 GORABQ5T7V8 394 aa14.62□□□□□ -0.07
TMEM253-202ENST00000553744 WDR66Q8TBY9 1149 aa14.62□□□□□ -0.07
TMEM253-202ENST00000553744 RHPN1Q8TCX5 695 aa14.62□□□□□ -0.07
TMEM253-202ENST00000553744 GGA3Q9NZ52 723 aa14.62□□□□□ -0.07
TMEM253-202ENST00000553744 PDS5AQ29RF7 1337 aaKnown RBP14.62□□□□□ -0.07
TMEM253-202ENST00000553744 WNT10BO00744 389 aa14.61□□□□□ -0.07
TMEM253-202ENST00000553744 RAB11FIP3O75154 756 aa14.61□□□□□ -0.07
TMEM253-202ENST00000553744 RASGRF1Q13972 1273 aa14.61□□□□□ -0.07
TMEM253-202ENST00000553744 SCARF1Q14162 830 aa14.61□□□□□ -0.07
TMEM253-202ENST00000553744 GRIK5Q16478 980 aa14.61□□□□□ -0.07
TMEM253-202ENST00000553744 MTMR14Q8NCE2 650 aa14.61□□□□□ -0.07
TMEM253-202ENST00000553744 KIF1BPQ96EK5 621 aa14.61□□□□□ -0.07
TMEM253-202ENST00000553744 ZBED3Q96IU2 234 aaPredicted RBP14.61□□□□□ -0.07
TMEM253-202ENST00000553744 DBNDD2Q9BQY9 259 aa14.61□□□□□ -0.07
TMEM253-202ENST00000553744 TTF2Q9UNY4 1162 aaKnown RBP14.61□□□□□ -0.07
TMEM253-202ENST00000553744 SUGT1Q9Y2Z0 365 aa14.61□□□□□ -0.07
TMEM253-202ENST00000553744 PCDHB15Q9Y5E8 787 aa14.61□□□□□ -0.07
TMEM253-202ENST00000553744 ASTN2O75129 1339 aaPredicted RBP14.61□□□□□ -0.07
TMEM253-202ENST00000553744 SALL1Q9NSC2 1324 aa14.61□□□□□ -0.07
TMEM253-202ENST00000553744 ARID4AP29374 1257 aaPredicted RBP14.6□□□□□ -0.07
TMEM253-202ENST00000553744 NBPF9Q3BBW0 867 aa14.6□□□□□ -0.07
TMEM253-202ENST00000553744 CFAP100Q494V2 611 aa14.6□□□□□ -0.07
TMEM253-202ENST00000553744 DCPSQ96C86 337 aaKnown RBP14.6□□□□□ -0.07
TMEM253-202ENST00000553744 EAF2Q96CJ1 260 aaPredicted RBP14.6□□□□□ -0.07
TMEM253-202ENST00000553744 GLIS2Q9BZE0 524 aaPredicted RBP14.6□□□□□ -0.07
TMEM253-202ENST00000553744 DBNLQ9UJU6 430 aaKnown RBP14.6□□□□□ -0.07
TMEM253-202ENST00000553744 PITPNM2Q9BZ72 1349 aa14.6□□□□□ -0.07
TMEM253-202ENST00000553744 APBB1O00213 710 aa14.59□□□□□ -0.07
TMEM253-202ENST00000553744 UQCRFS1P1P0C7P4 283 aa14.59□□□□□ -0.07
TMEM253-202ENST00000553744 AAMPQ13685 434 aa14.59□□□□□ -0.07
TMEM253-202ENST00000553744 DLGAP5Q15398 846 aa14.59□□□□□ -0.07
TMEM253-202ENST00000553744 ANGEL2Q5VTE6 544 aaKnown RBP14.59□□□□□ -0.07
TMEM253-202ENST00000553744 CDC37L1Q7L3B6 337 aa14.59□□□□□ -0.07
TMEM253-202ENST00000553744 KRT26Q7Z3Y9 468 aa14.59□□□□□ -0.07
TMEM253-202ENST00000553744 CCDC8Q9H0W5 538 aaPredicted RBP14.59□□□□□ -0.07
TMEM253-202ENST00000553744 IL1RAPL2Q9NP60 686 aa14.59□□□□□ -0.07
TMEM253-202ENST00000553744 TLR7Q9NYK1 1049 aaKnown RBP14.59□□□□□ -0.07
TMEM253-202ENST00000553744 SERPINA10Q9UK55 444 aa14.59□□□□□ -0.07
TMEM253-202ENST00000553744 MAST3O60307 1309 aa14.59□□□□□ -0.07
TMEM253-202ENST00000553744 SPDYE2BA6NHP3 402 aa14.58□□□□□ -0.08
TMEM253-202ENST00000553744 TRAF5O00463 557 aa14.58□□□□□ -0.08
TMEM253-202ENST00000553744 SPDYE6P0CI01 402 aa14.58□□□□□ -0.08
TMEM253-202ENST00000553744 PRDX5P30044 214 aa14.58□□□□□ -0.08
TMEM253-202ENST00000553744 MCAMP43121 646 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms