RNA–Protein interactions for RNA: ENST00000553438.1

IFT43-205, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 472 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-205ENST00000553438 PCDHAC2Q9Y5I4 1007 aa13.06□□□□□ -0.32
IFT43-205ENST00000553438 PPP2R3BQ9Y5P8 575 aa13.06□□□□□ -0.32
IFT43-205ENST00000553438 CLRN2A0PK11 232 aa13.05□□□□□ -0.32
IFT43-205ENST00000553438 UNCXA6NJT0 531 aa13.05□□□□□ -0.32
IFT43-205ENST00000553438 F8W031 263 aaPredicted RBP13.05□□□□□ -0.32
IFT43-205ENST00000553438 SNAP23O00161 211 aa13.05□□□□□ -0.32
IFT43-205ENST00000553438 CASP7P55210 303 aa13.05□□□□□ -0.32
IFT43-205ENST00000553438 SUPT20HL1Q3ZLR7 823 aa13.05□□□□□ -0.32
IFT43-205ENST00000553438 ERO1AQ96HE7 468 aa13.05□□□□□ -0.32
IFT43-205ENST00000553438 PRKRIP1Q9H875 184 aaPredicted RBP13.05□□□□□ -0.32
IFT43-205ENST00000553438 IRS2Q9Y4H2 1338 aa13.05□□□□□ -0.32
IFT43-205ENST00000553438 SPDYE2BA6NHP3 402 aa13.04□□□□□ -0.32
IFT43-205ENST00000553438 MYO1BO43795 1136 aa13.04□□□□□ -0.32
IFT43-205ENST00000553438 SLC4A2P04920 1241 aa13.04□□□□□ -0.32
IFT43-205ENST00000553438 SPDYE6P0CI01 402 aa13.04□□□□□ -0.32
IFT43-205ENST00000553438 CRHR2Q13324 411 aa13.04□□□□□ -0.32
IFT43-205ENST00000553438 CFAP100Q494V2 611 aa13.04□□□□□ -0.32
IFT43-205ENST00000553438 HABP4Q5JVS0 413 aaKnown RBP13.04□□□□□ -0.32
IFT43-205ENST00000553438 NBPF12Q5TAG4 269 aaPredicted RBP13.04□□□□□ -0.32
IFT43-205ENST00000553438 C15orf52Q6ZUT6 534 aaKnown RBP13.04□□□□□ -0.32
IFT43-205ENST00000553438 CD99L2Q8TCZ2 262 aa13.04□□□□□ -0.32
IFT43-205ENST00000553438 PRMT6Q96LA8 375 aaPredicted RBP13.04□□□□□ -0.32
IFT43-205ENST00000553438 MYH16Q9H6N6 1097 aa13.04□□□□□ -0.32
IFT43-205ENST00000553438 VEZTQ9HBM0 779 aa13.04□□□□□ -0.32
IFT43-205ENST00000553438 PTPN22Q9Y2R2 807 aa13.04□□□□□ -0.32
IFT43-205ENST00000553438 CENPFP49454 3210 aa13.04□□□□□ -0.32
IFT43-205ENST00000553438 ANKRD18BA2A2Z9 1011 aa13.03□□□□□ -0.32
IFT43-205ENST00000553438 TAF5LO75529 589 aa13.03□□□□□ -0.32
IFT43-205ENST00000553438 USP2O75604 605 aaPredicted RBP13.03□□□□□ -0.32
IFT43-205ENST00000553438 GJA5P36382 358 aa13.03□□□□□ -0.32
IFT43-205ENST00000553438 IREB2P48200 963 aaKnown RBP13.03□□□□□ -0.32
IFT43-205ENST00000553438 TWISTNBQ3B726 338 aaPredicted RBP13.03□□□□□ -0.32
IFT43-205ENST00000553438 OTUD7BQ6GQQ9 843 aa13.03□□□□□ -0.32
IFT43-205ENST00000553438 HELBQ8NG08 1087 aaPredicted RBP13.03□□□□□ -0.32
IFT43-205ENST00000553438 DNAAF4Q8WXU2 420 aa13.03□□□□□ -0.32
IFT43-205ENST00000553438 ARMC5Q96C12 935 aa13.03□□□□□ -0.32
IFT43-205ENST00000553438 EFCC1Q9HA90 598 aa13.03□□□□□ -0.32
IFT43-205ENST00000553438 AOX1Q06278 1338 aa13.03□□□□□ -0.32
IFT43-205ENST00000553438 IL1R1P14778 569 aa13.02□□□□□ -0.33
IFT43-205ENST00000553438 FKBP1AP62942 108 aaKnown RBP13.02□□□□□ -0.33
IFT43-205ENST00000553438 FLIIQ13045 1269 aa13.02□□□□□ -0.33
IFT43-205ENST00000553438 RASA3Q14644 834 aa13.02□□□□□ -0.33
IFT43-205ENST00000553438 ZNF804AQ7Z570 1209 aa13.02□□□□□ -0.33
IFT43-205ENST00000553438 ANKRD13AQ8IZ07 590 aa13.02□□□□□ -0.33
IFT43-205ENST00000553438 LINS1Q8NG48 757 aa13.02□□□□□ -0.33
IFT43-205ENST00000553438 JAG2Q9Y219 1238 aa13.02□□□□□ -0.33
IFT43-205ENST00000553438 TESPA1A2RU30 521 aaPredicted RBP13.01□□□□□ -0.33
IFT43-205ENST00000553438 RBM5P52756 815 aaKnown RBP eCLIP13.01□□□□□ -0.33
IFT43-205ENST00000553438 SP3Q02447 781 aa13.01□□□□□ -0.33
IFT43-205ENST00000553438 IFIT5Q13325 482 aaKnown RBP13.01□□□□□ -0.33
IFT43-205ENST00000553438 FKBP5Q13451 457 aaPredicted RBP13.01□□□□□ -0.33
IFT43-205ENST00000553438 PTPN18Q99952 460 aa13.01□□□□□ -0.33
IFT43-205ENST00000553438 ECM29Q5VYK3 1845 aa13□□□□□ -0.33
IFT43-205ENST00000553438 EN2P19622 333 aaPredicted RBP13□□□□□ -0.33
IFT43-205ENST00000553438 CAP1Q01518 475 aa13□□□□□ -0.33
IFT43-205ENST00000553438 OPTNQ96CV9 577 aa13□□□□□ -0.33
IFT43-205ENST00000553438 CHMP3Q9Y3E7 222 aa13□□□□□ -0.33
IFT43-205ENST00000553438 BRCA2P51587 3418 aa13□□□□□ -0.33
IFT43-205ENST00000553438 LAMB1P07942 1786 aa12.99□□□□□ -0.33
IFT43-205ENST00000553438 FOXO4P98177 505 aa12.99□□□□□ -0.33
IFT43-205ENST00000553438 TNFAIP1Q13829 316 aa12.99□□□□□ -0.33
IFT43-205ENST00000553438 CCDC27Q2M243 656 aa12.99□□□□□ -0.33
IFT43-205ENST00000553438 SPDYE2Q495Y8 402 aa12.99□□□□□ -0.33
IFT43-205ENST00000553438 WWC1Q8IX03 1113 aa12.99□□□□□ -0.33
IFT43-205ENST00000553438 ELP3Q9H9T3 547 aa12.99□□□□□ -0.33
IFT43-205ENST00000553438 RBBP6Q7Z6E9 1792 aaKnown RBP12.99□□□□□ -0.33
IFT43-205ENST00000553438 FAM205AQ6ZU69 1335 aa12.98□□□□□ -0.33
IFT43-205ENST00000553438 ZNF333Q96JL9 665 aa12.98□□□□□ -0.33
IFT43-205ENST00000553438 MS4A4AQ96JQ5 239 aa12.98□□□□□ -0.33
IFT43-205ENST00000553438 TMEM106CQ9BVX2 250 aa12.98□□□□□ -0.33
IFT43-205ENST00000553438 ZNF70Q9UC06 446 aaPredicted RBP12.98□□□□□ -0.33
IFT43-205ENST00000553438 PLIN1O60240 522 aa12.97□□□□□ -0.33
IFT43-205ENST00000553438 ARHGEF6Q15052 776 aa12.97□□□□□ -0.33
IFT43-205ENST00000553438 TAF1CQ15572 869 aaPredicted RBP12.97□□□□□ -0.33
IFT43-205ENST00000553438 MFSD14BQ5SR56 506 aa12.97□□□□□ -0.33
IFT43-205ENST00000553438 LMBR1LQ6UX01 489 aa12.97□□□□□ -0.33
IFT43-205ENST00000553438 CDAN1Q8IWY9 1227 aa12.97□□□□□ -0.33
IFT43-205ENST00000553438 CNKSR2Q8WXI2 1034 aa12.97□□□□□ -0.33
IFT43-205ENST00000553438 BRI3BPQ8WY22 251 aa12.97□□□□□ -0.33
IFT43-205ENST00000553438 ZNF594Q96JF6 807 aaPredicted RBP12.97□□□□□ -0.33
IFT43-205ENST00000553438 TDRD3Q9H7E2 651 aaKnown RBP12.97□□□□□ -0.33
IFT43-205ENST00000553438 CNNM1Q9NRU3 951 aa12.97□□□□□ -0.33
IFT43-205ENST00000553438 TTF2Q9UNY4 1162 aaKnown RBP12.97□□□□□ -0.33
IFT43-205ENST00000553438 A0A1B0GUL6 1792 aa12.97□□□□□ -0.33
IFT43-205ENST00000553438 IL16Q14005 1332 aa12.96□□□□□ -0.33
IFT43-205ENST00000553438 CCL15-CCL14A0A0B4J2E2 113 aa12.96□□□□□ -0.33
IFT43-205ENST00000553438 FXR1P51114 621 aaKnown RBP eCLIP12.96□□□□□ -0.33
IFT43-205ENST00000553438 MAP3K9P80192 1104 aa12.96□□□□□ -0.33
IFT43-205ENST00000553438 CCL15Q16663 113 aa12.96□□□□□ -0.33
IFT43-205ENST00000553438 CCDC57Q2TAC2 916 aa12.96□□□□□ -0.33
IFT43-205ENST00000553438 TAF7LQ5H9L4 462 aa12.96□□□□□ -0.33
IFT43-205ENST00000553438 EPHA10Q5JZY3 1008 aa12.96□□□□□ -0.33
IFT43-205ENST00000553438 BEND3Q5T5X7 828 aa12.96□□□□□ -0.33
IFT43-205ENST00000553438 LDHAL6AQ6ZMR3 332 aa12.96□□□□□ -0.33
IFT43-205ENST00000553438 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.96□□□□□ -0.33
IFT43-205ENST00000553438 DZIP1LQ8IYY4 767 aaKnown RBP12.96□□□□□ -0.33
IFT43-205ENST00000553438 TEPSINQ96N21 525 aa12.96□□□□□ -0.33
IFT43-205ENST00000553438 ZFYVE28Q9HCC9 887 aa12.96□□□□□ -0.33
IFT43-205ENST00000553438 SERPINA10Q9UK55 444 aa12.96□□□□□ -0.33
IFT43-205ENST00000553438 PTCH2Q9Y6C5 1203 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms