RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 IL1R1P14778 569 aa12.73□□□□□ -0.37
LINC00517-201ENST00000553396 HIBADHP31937 336 aaKnown RBP12.73□□□□□ -0.37
LINC00517-201ENST00000553396 SCARF1Q14162 830 aa12.73□□□□□ -0.37
LINC00517-201ENST00000553396 CDC37L1Q7L3B6 337 aa12.73□□□□□ -0.37
LINC00517-201ENST00000553396 KRT26Q7Z3Y9 468 aa12.73□□□□□ -0.37
LINC00517-201ENST00000553396 OGFOD1Q8N543 542 aa12.73□□□□□ -0.37
LINC00517-201ENST00000553396 DCPSQ96C86 337 aaKnown RBP12.73□□□□□ -0.37
LINC00517-201ENST00000553396 FAM84BQ96KN1 310 aaPredicted RBP12.73□□□□□ -0.37
LINC00517-201ENST00000553396 IQSEC3Q9UPP2 1182 aaPredicted RBP12.73□□□□□ -0.37
LINC00517-201ENST00000553396 CNTNAP1P78357 1384 aa12.72□□□□□ -0.37
LINC00517-201ENST00000553396 SRGAP3O43295 1099 aa12.72□□□□□ -0.37
LINC00517-201ENST00000553396 SASH1O94885 1247 aa12.72□□□□□ -0.37
LINC00517-201ENST00000553396 PUM3Q15397 648 aaKnown RBP12.72□□□□□ -0.37
LINC00517-201ENST00000553396 ANGEL2Q5VTE6 544 aaKnown RBP12.72□□□□□ -0.37
LINC00517-201ENST00000553396 CST9Q5W186 159 aa12.72□□□□□ -0.37
LINC00517-201ENST00000553396 ATG9AQ7Z3C6 839 aa12.72□□□□□ -0.37
LINC00517-201ENST00000553396 VPS37DQ86XT2 251 aa12.72□□□□□ -0.37
LINC00517-201ENST00000553396 ITPRIPQ8IWB1 547 aa12.72□□□□□ -0.37
LINC00517-201ENST00000553396 DZIP1LQ8IYY4 767 aaKnown RBP12.72□□□□□ -0.37
LINC00517-201ENST00000553396 CERS5Q8N5B7 392 aa12.72□□□□□ -0.37
LINC00517-201ENST00000553396 SCAF8Q9UPN6 1271 aaKnown RBP12.72□□□□□ -0.37
LINC00517-201ENST00000553396 GNAI2P04899 355 aa12.71□□□□□ -0.37
LINC00517-201ENST00000553396 NBPF9Q3BBW0 867 aa12.71□□□□□ -0.37
LINC00517-201ENST00000553396 PAXIP1Q6ZW49 1069 aaPredicted RBP12.71□□□□□ -0.37
LINC00517-201ENST00000553396 SULF1Q8IWU6 871 aa12.71□□□□□ -0.37
LINC00517-201ENST00000553396 JMYQ8N9B5 988 aa12.71□□□□□ -0.37
LINC00517-201ENST00000553396 C1orf115Q9H7X2 142 aa12.71□□□□□ -0.37
LINC00517-201ENST00000553396 HDAC9Q9UKV0 1011 aa12.71□□□□□ -0.37
LINC00517-201ENST00000553396 ECM29Q5VYK3 1845 aa12.71□□□□□ -0.38
LINC00517-201ENST00000553396 PCNTO95613 3336 aa12.71□□□□□ -0.38
LINC00517-201ENST00000553396 CIAO1O76071 339 aa12.7□□□□□ -0.38
LINC00517-201ENST00000553396 IFIT1P09914 478 aaKnown RBP12.7□□□□□ -0.38
LINC00517-201ENST00000553396 SLC5A1P13866 664 aa12.7□□□□□ -0.38
LINC00517-201ENST00000553396 FGFR2P21802 821 aa12.7□□□□□ -0.38
LINC00517-201ENST00000553396 BCAMP50895 628 aa12.7□□□□□ -0.38
LINC00517-201ENST00000553396 CHAF1AQ13111 956 aaPredicted RBP12.7□□□□□ -0.38
LINC00517-201ENST00000553396 GRM1Q13255 1194 aa12.7□□□□□ -0.38
LINC00517-201ENST00000553396 CAVIN4Q5BKX8 364 aa12.7□□□□□ -0.38
LINC00517-201ENST00000553396 TDRD7Q8NHU6 1098 aaKnown RBP12.7□□□□□ -0.38
LINC00517-201ENST00000553396 PANK1Q8TE04 598 aa12.7□□□□□ -0.38
LINC00517-201ENST00000553396 COPRSQ9NQ92 184 aa12.7□□□□□ -0.38
LINC00517-201ENST00000553396 RASSF10A6NK89 507 aa12.69□□□□□ -0.38
LINC00517-201ENST00000553396 WNT10BO00744 389 aa12.69□□□□□ -0.38
LINC00517-201ENST00000553396 FRAT2O75474 233 aaPredicted RBP12.69□□□□□ -0.38
LINC00517-201ENST00000553396 IL15P40933 162 aaPredicted RBP12.69□□□□□ -0.38
LINC00517-201ENST00000553396 VEGFBP49765 207 aa12.69□□□□□ -0.38
LINC00517-201ENST00000553396 MTX1Q13505 466 aa12.69□□□□□ -0.38
LINC00517-201ENST00000553396 MFSD14BQ5SR56 506 aa12.69□□□□□ -0.38
LINC00517-201ENST00000553396 FBXO33Q7Z6M2 555 aa12.69□□□□□ -0.38
LINC00517-201ENST00000553396 LPIN2Q92539 896 aa12.69□□□□□ -0.38
LINC00517-201ENST00000553396 CEP126Q9P2H0 1117 aa12.69□□□□□ -0.38
LINC00517-201ENST00000553396 FBXO3Q9UK99 471 aa12.69□□□□□ -0.38
LINC00517-201ENST00000553396 PCDHAC2Q9Y5I4 1007 aa12.69□□□□□ -0.38
LINC00517-201ENST00000553396 FAM205AQ6ZU69 1335 aa12.68□□□□□ -0.38
LINC00517-201ENST00000553396 PNMA6EA0A0J9YXQ4 647 aa12.68□□□□□ -0.38
LINC00517-201ENST00000553396 ATP2B3Q16720 1220 aa12.68□□□□□ -0.38
LINC00517-201ENST00000553396 DEFB115Q30KQ5 88 aa12.68□□□□□ -0.38
LINC00517-201ENST00000553396 CDCA5Q96FF9 252 aa12.68□□□□□ -0.38
LINC00517-201ENST00000553396 RCAN3Q9UKA8 241 aa12.68□□□□□ -0.38
LINC00517-201ENST00000553396 TLL2Q9Y6L7 1015 aa12.68□□□□□ -0.38
LINC00517-201ENST00000553396 RBM5P52756 815 aaKnown RBP eCLIP12.67□□□□□ -0.38
LINC00517-201ENST00000553396 FKBP1AP62942 108 aaKnown RBP12.67□□□□□ -0.38
LINC00517-201ENST00000553396 DLGAP5Q15398 846 aa12.67□□□□□ -0.38
LINC00517-201ENST00000553396 CFAP100Q494V2 611 aa12.67□□□□□ -0.38
LINC00517-201ENST00000553396 SAPCD2Q86UD0 394 aa12.67□□□□□ -0.38
LINC00517-201ENST00000553396 TTF2Q9UNY4 1162 aaKnown RBP12.67□□□□□ -0.38
LINC00517-201ENST00000553396 COL1A1P02452 1464 aaPredicted RBP12.66□□□□□ -0.38
LINC00517-201ENST00000553396 PITPNM2Q9BZ72 1349 aa12.66□□□□□ -0.38
LINC00517-201ENST00000553396 ZBTB7BO15156 539 aaPredicted RBP12.66□□□□□ -0.38
LINC00517-201ENST00000553396 ADORA1P30542 326 aa12.66□□□□□ -0.38
LINC00517-201ENST00000553396 MMP14P50281 582 aa12.66□□□□□ -0.38
LINC00517-201ENST00000553396 TFCP2Q12800 502 aa12.66□□□□□ -0.38
LINC00517-201ENST00000553396 GRIK5Q16478 980 aa12.66□□□□□ -0.38
LINC00517-201ENST00000553396 PRAMEF18Q5VWM3 479 aa12.66□□□□□ -0.38
LINC00517-201ENST00000553396 CYP4F22Q6NT55 531 aa12.66□□□□□ -0.38
LINC00517-201ENST00000553396 ZBED3Q96IU2 234 aaPredicted RBP12.66□□□□□ -0.38
LINC00517-201ENST00000553396 CAPNS2Q96L46 248 aa12.66□□□□□ -0.38
LINC00517-201ENST00000553396 YTHDC1Q96MU7 727 aaKnown RBP12.66□□□□□ -0.38
LINC00517-201ENST00000553396 GBA2Q9HCG7 927 aaPredicted RBP12.66□□□□□ -0.38
LINC00517-201ENST00000553396 AOX1Q06278 1338 aa12.65□□□□□ -0.38
LINC00517-201ENST00000553396 WDR33Q9C0J8 1336 aaKnown RBP12.65□□□□□ -0.38
LINC00517-201ENST00000553396 CLRN2A0PK11 232 aa12.65□□□□□ -0.38
LINC00517-201ENST00000553396 SPDYE2BA6NHP3 402 aa12.65□□□□□ -0.38
LINC00517-201ENST00000553396 SPDYE6P0CI01 402 aa12.65□□□□□ -0.38
LINC00517-201ENST00000553396 HSPA1AP0DMV8 641 aaKnown RBP12.65□□□□□ -0.38
LINC00517-201ENST00000553396 HSPA1BP0DMV9 641 aaKnown RBP12.65□□□□□ -0.38
LINC00517-201ENST00000553396 HUNKP57058 714 aa12.65□□□□□ -0.38
LINC00517-201ENST00000553396 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.65□□□□□ -0.38
LINC00517-201ENST00000553396 THSD7BQ9C0I4 1608 aa12.65□□□□□ -0.38
LINC00517-201ENST00000553396 PAPPA2Q9BXP8 1791 aa12.64□□□□□ -0.39
LINC00517-201ENST00000553396 A0A1B0GUL7 405 aa12.64□□□□□ -0.39
LINC00517-201ENST00000553396 PHKA1P46020 1223 aa12.64□□□□□ -0.39
LINC00517-201ENST00000553396 ATP8B2P98198 1209 aa12.64□□□□□ -0.39
LINC00517-201ENST00000553396 G3BP1Q13283 466 aaKnown RBP eCLIP12.64□□□□□ -0.39
LINC00517-201ENST00000553396 APOBEC3FQ8IUX4 373 aaKnown RBP12.64□□□□□ -0.39
LINC00517-201ENST00000553396 C2orf69Q8N8R5 385 aa12.64□□□□□ -0.39
LINC00517-201ENST00000553396 MTMR14Q8NCE2 650 aa12.64□□□□□ -0.39
LINC00517-201ENST00000553396 TBC1D22AQ8WUA7 517 aa12.64□□□□□ -0.39
LINC00517-201ENST00000553396 PRMT6Q96LA8 375 aaPredicted RBP12.64□□□□□ -0.39
LINC00517-201ENST00000553396 VEZTQ9HBM0 779 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms