RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 F8W031 263 aaPredicted RBP11.63□□□□□ -0.55
SYNE2-209ENST00000553308 TAF5LO75529 589 aa11.63□□□□□ -0.55
SYNE2-209ENST00000553308 CSF1RP07333 972 aa11.63□□□□□ -0.55
SYNE2-209ENST00000553308 ZBTB48P10074 688 aaPredicted RBP11.63□□□□□ -0.55
SYNE2-209ENST00000553308 HELBQ8NG08 1087 aaPredicted RBP11.63□□□□□ -0.55
SYNE2-209ENST00000553308 RBBP6Q7Z6E9 1792 aaKnown RBP11.62□□□□□ -0.55
SYNE2-209ENST00000553308 OTOFQ9HC10 1997 aa11.62□□□□□ -0.55
SYNE2-209ENST00000553308 SLC4A2P04920 1241 aa11.62□□□□□ -0.55
SYNE2-209ENST00000553308 GJA5P36382 358 aa11.62□□□□□ -0.55
SYNE2-209ENST00000553308 INHBEP58166 350 aa11.62□□□□□ -0.55
SYNE2-209ENST00000553308 TWISTNBQ3B726 338 aaPredicted RBP11.62□□□□□ -0.55
SYNE2-209ENST00000553308 CFAP100Q494V2 611 aa11.62□□□□□ -0.55
SYNE2-209ENST00000553308 NBPF12Q5TAG4 269 aaPredicted RBP11.62□□□□□ -0.55
SYNE2-209ENST00000553308 MTMR14Q8NCE2 650 aa11.62□□□□□ -0.55
SYNE2-209ENST00000553308 CD99L2Q8TCZ2 262 aa11.62□□□□□ -0.55
SYNE2-209ENST00000553308 VEZTQ9HBM0 779 aa11.62□□□□□ -0.55
SYNE2-209ENST00000553308 JAG2Q9Y219 1238 aa11.62□□□□□ -0.55
SYNE2-209ENST00000553308 PPP2R3BQ9Y5P8 575 aa11.62□□□□□ -0.55
SYNE2-209ENST00000553308 ANKRD18BA2A2Z9 1011 aa11.61□□□□□ -0.55
SYNE2-209ENST00000553308 SPDYE2BA6NHP3 402 aa11.61□□□□□ -0.55
SYNE2-209ENST00000553308 PPP1R12BO60237 982 aaPredicted RBP11.61□□□□□ -0.55
SYNE2-209ENST00000553308 SPDYE6P0CI01 402 aa11.61□□□□□ -0.55
SYNE2-209ENST00000553308 CAP1Q01518 475 aa11.61□□□□□ -0.55
SYNE2-209ENST00000553308 FLIIQ13045 1269 aa11.61□□□□□ -0.55
SYNE2-209ENST00000553308 CRHR2Q13324 411 aa11.61□□□□□ -0.55
SYNE2-209ENST00000553308 C15orf52Q6ZUT6 534 aaKnown RBP11.61□□□□□ -0.55
SYNE2-209ENST00000553308 DNAAF4Q8WXU2 420 aa11.61□□□□□ -0.55
SYNE2-209ENST00000553308 GCC1Q96CN9 775 aa11.61□□□□□ -0.55
SYNE2-209ENST00000553308 PRMT6Q96LA8 375 aaPredicted RBP11.61□□□□□ -0.55
SYNE2-209ENST00000553308 MYH16Q9H6N6 1097 aa11.61□□□□□ -0.55
SYNE2-209ENST00000553308 MYO1BO43795 1136 aa11.6□□□□□ -0.55
SYNE2-209ENST00000553308 IL1R1P14778 569 aa11.6□□□□□ -0.55
SYNE2-209ENST00000553308 FKBP5Q13451 457 aaPredicted RBP11.6□□□□□ -0.55
SYNE2-209ENST00000553308 HABP4Q5JVS0 413 aaKnown RBP11.6□□□□□ -0.55
SYNE2-209ENST00000553308 INTS3Q68E01 1043 aaKnown RBP11.6□□□□□ -0.55
SYNE2-209ENST00000553308 ZNF804AQ7Z570 1209 aa11.6□□□□□ -0.55
SYNE2-209ENST00000553308 LINS1Q8NG48 757 aa11.6□□□□□ -0.55
SYNE2-209ENST00000553308 ERO1AQ96HE7 468 aa11.6□□□□□ -0.55
SYNE2-209ENST00000553308 PTPN18Q99952 460 aa11.6□□□□□ -0.55
SYNE2-209ENST00000553308 PTPN22Q9Y2R2 807 aa11.6□□□□□ -0.55
SYNE2-209ENST00000553308 USP2O75604 605 aaPredicted RBP11.59□□□□□ -0.55
SYNE2-209ENST00000553308 IREB2P48200 963 aaKnown RBP11.59□□□□□ -0.55
SYNE2-209ENST00000553308 RBM5P52756 815 aaKnown RBP eCLIP11.59□□□□□ -0.55
SYNE2-209ENST00000553308 FOXO4P98177 505 aa11.59□□□□□ -0.55
SYNE2-209ENST00000553308 IFIT5Q13325 482 aaKnown RBP11.59□□□□□ -0.55
SYNE2-209ENST00000553308 RASA3Q14644 834 aa11.59□□□□□ -0.55
SYNE2-209ENST00000553308 SUPT20HL1Q3ZLR7 823 aa11.59□□□□□ -0.55
SYNE2-209ENST00000553308 CHMP3Q9Y3E7 222 aa11.59□□□□□ -0.55
SYNE2-209ENST00000553308 UNCXA6NJT0 531 aa11.58□□□□□ -0.56
SYNE2-209ENST00000553308 EN2P19622 333 aaPredicted RBP11.58□□□□□ -0.56
SYNE2-209ENST00000553308 FKBP1AP62942 108 aaKnown RBP11.58□□□□□ -0.56
SYNE2-209ENST00000553308 OTUD7BQ6GQQ9 843 aa11.58□□□□□ -0.56
SYNE2-209ENST00000553308 CDAN1Q8IWY9 1227 aa11.58□□□□□ -0.56
SYNE2-209ENST00000553308 WWC1Q8IX03 1113 aa11.58□□□□□ -0.56
SYNE2-209ENST00000553308 ANKRD13AQ8IZ07 590 aa11.58□□□□□ -0.56
SYNE2-209ENST00000553308 ARMC5Q96C12 935 aa11.58□□□□□ -0.56
SYNE2-209ENST00000553308 OPTNQ96CV9 577 aa11.58□□□□□ -0.56
SYNE2-209ENST00000553308 ZNF594Q96JF6 807 aaPredicted RBP11.58□□□□□ -0.56
SYNE2-209ENST00000553308 ELP3Q9H9T3 547 aa11.58□□□□□ -0.56
SYNE2-209ENST00000553308 EFCC1Q9HA90 598 aa11.58□□□□□ -0.56
SYNE2-209ENST00000553308 HTTP42858 3142 aa11.58□□□□□ -0.56
SYNE2-209ENST00000553308 ARAP2Q8WZ64 1704 aa11.57□□□□□ -0.56
SYNE2-209ENST00000553308 TESPA1A2RU30 521 aaPredicted RBP11.57□□□□□ -0.56
SYNE2-209ENST00000553308 F6X3S4 739 aa11.57□□□□□ -0.56
SYNE2-209ENST00000553308 PLIN1O60240 522 aa11.57□□□□□ -0.56
SYNE2-209ENST00000553308 SP3Q02447 781 aa11.57□□□□□ -0.56
SYNE2-209ENST00000553308 CCDC27Q2M243 656 aa11.57□□□□□ -0.56
SYNE2-209ENST00000553308 CCDC184Q52MB2 194 aa11.57□□□□□ -0.56
SYNE2-209ENST00000553308 EPHA10Q5JZY3 1008 aa11.57□□□□□ -0.56
SYNE2-209ENST00000553308 CNKSR2Q8WXI2 1034 aa11.57□□□□□ -0.56
SYNE2-209ENST00000553308 FANCIQ9NVI1 1328 aa11.57□□□□□ -0.56
SYNE2-209ENST00000553308 SPDYE2Q495Y8 402 aa11.56□□□□□ -0.56
SYNE2-209ENST00000553308 MFSD14BQ5SR56 506 aa11.56□□□□□ -0.56
SYNE2-209ENST00000553308 LMBR1LQ6UX01 489 aa11.56□□□□□ -0.56
SYNE2-209ENST00000553308 MS4A4AQ96JQ5 239 aa11.56□□□□□ -0.56
SYNE2-209ENST00000553308 TDRD3Q9H7E2 651 aaKnown RBP11.56□□□□□ -0.56
SYNE2-209ENST00000553308 ZNF70Q9UC06 446 aaPredicted RBP11.56□□□□□ -0.56
SYNE2-209ENST00000553308 FAM205AQ6ZU69 1335 aa11.56□□□□□ -0.56
SYNE2-209ENST00000553308 TNFAIP1Q13829 316 aa11.55□□□□□ -0.56
SYNE2-209ENST00000553308 TAF7LQ5H9L4 462 aa11.55□□□□□ -0.56
SYNE2-209ENST00000553308 BEND3Q5T5X7 828 aa11.55□□□□□ -0.56
SYNE2-209ENST00000553308 LDHAL6AQ6ZMR3 332 aa11.55□□□□□ -0.56
SYNE2-209ENST00000553308 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.55□□□□□ -0.56
SYNE2-209ENST00000553308 BRI3BPQ8WY22 251 aa11.55□□□□□ -0.56
SYNE2-209ENST00000553308 ZNF333Q96JL9 665 aa11.55□□□□□ -0.56
SYNE2-209ENST00000553308 TEPSINQ96N21 525 aa11.55□□□□□ -0.56
SYNE2-209ENST00000553308 CNNM1Q9NRU3 951 aa11.55□□□□□ -0.56
SYNE2-209ENST00000553308 TTF2Q9UNY4 1162 aaKnown RBP11.55□□□□□ -0.56
SYNE2-209ENST00000553308 PTCH2Q9Y6C5 1203 aa11.55□□□□□ -0.56
SYNE2-209ENST00000553308 ZSWIM8A7E2V4 1837 aa11.55□□□□□ -0.56
SYNE2-209ENST00000553308 IL16Q14005 1332 aa11.55□□□□□ -0.56
SYNE2-209ENST00000553308 CACNA1FO60840 1977 aa11.54□□□□□ -0.56
SYNE2-209ENST00000553308 CCL15-CCL14A0A0B4J2E2 113 aa11.54□□□□□ -0.56
SYNE2-209ENST00000553308 TCP10L2B9ZVM9 353 aa11.54□□□□□ -0.56
SYNE2-209ENST00000553308 VAMP4O75379 141 aa11.54□□□□□ -0.56
SYNE2-209ENST00000553308 GYG1P46976 350 aa11.54□□□□□ -0.56
SYNE2-209ENST00000553308 VGLL4Q14135 290 aa11.54□□□□□ -0.56
SYNE2-209ENST00000553308 TAF1CQ15572 869 aaPredicted RBP11.54□□□□□ -0.56
SYNE2-209ENST00000553308 CCL15Q16663 113 aa11.54□□□□□ -0.56
SYNE2-209ENST00000553308 CCDC57Q2TAC2 916 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms