RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 PAG1Q9NWQ8 432 aa11.84□□□□□ -0.51
TMEM116-216ENST00000552800 PDS5AQ29RF7 1337 aaKnown RBP11.84□□□□□ -0.51
TMEM116-216ENST00000552800 CARMIL3Q8ND23 1372 aa11.83□□□□□ -0.52
TMEM116-216ENST00000552800 CASZ1Q86V15 1759 aa11.83□□□□□ -0.52
TMEM116-216ENST00000552800 GYS1P13807 737 aa11.83□□□□□ -0.52
TMEM116-216ENST00000552800 IGHMBP2P38935 993 aaKnown RBP11.83□□□□□ -0.52
TMEM116-216ENST00000552800 TTF1Q15361 905 aaPredicted RBP11.83□□□□□ -0.52
TMEM116-216ENST00000552800 CRY2Q49AN0 593 aa11.83□□□□□ -0.52
TMEM116-216ENST00000552800 CWC27Q6UX04 472 aaKnown RBP11.83□□□□□ -0.52
TMEM116-216ENST00000552800 HSCBQ8IWL3 235 aa11.83□□□□□ -0.52
TMEM116-216ENST00000552800 NEUROD6Q96NK8 337 aa11.83□□□□□ -0.52
TMEM116-216ENST00000552800 DSCC1Q9BVC3 393 aa11.83□□□□□ -0.52
TMEM116-216ENST00000552800 ANO2Q9NQ90 1003 aa11.83□□□□□ -0.52
TMEM116-216ENST00000552800 GPHNQ9NQX3 736 aaPredicted RBP11.83□□□□□ -0.52
TMEM116-216ENST00000552800 HMG20BQ9P0W2 317 aa11.83□□□□□ -0.52
TMEM116-216ENST00000552800 ZNF804BA4D1E1 1349 aa11.83□□□□□ -0.52
TMEM116-216ENST00000552800 CCDC171Q6TFL3 1326 aa11.83□□□□□ -0.52
TMEM116-216ENST00000552800 C2orf72A6NCS6 295 aa11.82□□□□□ -0.52
TMEM116-216ENST00000552800 TRIM37O94972 964 aa11.82□□□□□ -0.52
TMEM116-216ENST00000552800 MAP4K4O95819 1239 aaPredicted RBP11.82□□□□□ -0.52
TMEM116-216ENST00000552800 HOXA10P31260 410 aaPredicted RBP11.82□□□□□ -0.52
TMEM116-216ENST00000552800 KCNQ4P56696 695 aa11.82□□□□□ -0.52
TMEM116-216ENST00000552800 RPS8P62241 208 aaKnown RBP11.82□□□□□ -0.52
TMEM116-216ENST00000552800 NMIQ13287 307 aaPredicted RBP11.82□□□□□ -0.52
TMEM116-216ENST00000552800 CUL4AQ13619 759 aa11.82□□□□□ -0.52
TMEM116-216ENST00000552800 NFIXQ14938 502 aa11.82□□□□□ -0.52
TMEM116-216ENST00000552800 CLEC17AQ6ZS10 378 aa11.82□□□□□ -0.52
TMEM116-216ENST00000552800 C15orf52Q6ZUT6 534 aaKnown RBP11.82□□□□□ -0.52
TMEM116-216ENST00000552800 FBXL16Q8N461 479 aa11.82□□□□□ -0.52
TMEM116-216ENST00000552800 INTS4Q96HW7 963 aaKnown RBP11.82□□□□□ -0.52
TMEM116-216ENST00000552800 TTC14Q96N46 770 aa11.82□□□□□ -0.52
TMEM116-216ENST00000552800 MPHOSPH8Q99549 860 aa11.82□□□□□ -0.52
TMEM116-216ENST00000552800 CWC22Q9HCG8 908 aaKnown RBP11.82□□□□□ -0.52
TMEM116-216ENST00000552800 ZSWIM6Q9HCJ5 1215 aa11.82□□□□□ -0.52
TMEM116-216ENST00000552800 SEC31BQ9NQW1 1179 aa11.82□□□□□ -0.52
TMEM116-216ENST00000552800 NRXN2Q9P2S2 1712 aa11.81□□□□□ -0.52
TMEM116-216ENST00000552800 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.81□□□□□ -0.52
TMEM116-216ENST00000552800 RNF113AO15541 343 aaKnown RBP11.81□□□□□ -0.52
TMEM116-216ENST00000552800 CD2BP2O95400 341 aaKnown RBP11.81□□□□□ -0.52
TMEM116-216ENST00000552800 PTH1RQ03431 593 aa11.81□□□□□ -0.52
TMEM116-216ENST00000552800 UBE3CQ15386 1083 aa11.81□□□□□ -0.52
TMEM116-216ENST00000552800 CCDC102BQ68D86 513 aa11.81□□□□□ -0.52
TMEM116-216ENST00000552800 NBPF5PQ86XG9 351 aaPredicted RBP11.81□□□□□ -0.52
TMEM116-216ENST00000552800 ANKRD18AQ8IVF6 992 aa11.81□□□□□ -0.52
TMEM116-216ENST00000552800 FAM227BQ96M60 508 aa11.81□□□□□ -0.52
TMEM116-216ENST00000552800 ANP32EQ9BTT0 268 aa11.81□□□□□ -0.52
TMEM116-216ENST00000552800 FSD1Q9BTV5 496 aa11.81□□□□□ -0.52
TMEM116-216ENST00000552800 SRP68Q9UHB9 627 aaKnown RBP11.81□□□□□ -0.52
TMEM116-216ENST00000552800 PALD1Q9ULE6 856 aa11.81□□□□□ -0.52
TMEM116-216ENST00000552800 MINPP1Q9UNW1 487 aa11.81□□□□□ -0.52
TMEM116-216ENST00000552800 SNX14Q9Y5W7 946 aa11.81□□□□□ -0.52
TMEM116-216ENST00000552800 A0A1B0GUL6 1792 aa11.81□□□□□ -0.52
TMEM116-216ENST00000552800 A0A0D9SFI3 127 aa11.8□□□□□ -0.52
TMEM116-216ENST00000552800 KIF3CO14782 793 aa11.8□□□□□ -0.52
TMEM116-216ENST00000552800 SEMA3EO15041 775 aa11.8□□□□□ -0.52
TMEM116-216ENST00000552800 SLC5A1P13866 664 aa11.8□□□□□ -0.52
TMEM116-216ENST00000552800 ADORA1P30542 326 aa11.8□□□□□ -0.52
TMEM116-216ENST00000552800 SLC4A3P48751 1232 aa11.8□□□□□ -0.52
TMEM116-216ENST00000552800 CHRNDQ07001 517 aa11.8□□□□□ -0.52
TMEM116-216ENST00000552800 ZSCAN25Q6NSZ9 544 aa11.8□□□□□ -0.52
TMEM116-216ENST00000552800 FBXO33Q7Z6M2 555 aa11.8□□□□□ -0.52
TMEM116-216ENST00000552800 NLGN1Q8N2Q7 840 aa11.8□□□□□ -0.52
TMEM116-216ENST00000552800 ANKRD2Q9GZV1 360 aa11.8□□□□□ -0.52
TMEM116-216ENST00000552800 CHMP5Q9NZZ3 219 aa11.8□□□□□ -0.52
TMEM116-216ENST00000552800 IRS2Q9Y4H2 1338 aa11.8□□□□□ -0.52
TMEM116-216ENST00000552800 MYH7P12883 1935 aa11.8□□□□□ -0.52
TMEM116-216ENST00000552800 DOCK2Q92608 1830 aa11.79□□□□□ -0.52
TMEM116-216ENST00000552800 MCAMP43121 646 aa11.79□□□□□ -0.52
TMEM116-216ENST00000552800 TTC39AQ5SRH9 613 aa11.79□□□□□ -0.52
TMEM116-216ENST00000552800 VPS53Q5VIR6 699 aa11.79□□□□□ -0.52
TMEM116-216ENST00000552800 RNF20Q5VTR2 975 aa11.79□□□□□ -0.52
TMEM116-216ENST00000552800 DDX27Q96GQ7 796 aaKnown RBP11.79□□□□□ -0.52
TMEM116-216ENST00000552800 WDR70Q9NW82 654 aa11.79□□□□□ -0.52
TMEM116-216ENST00000552800 QSER1Q2KHR3 1735 aa11.79□□□□□ -0.52
TMEM116-216ENST00000552800 RPAP1Q9BWH6 1393 aaPredicted RBP11.79□□□□□ -0.52
TMEM116-216ENST00000552800 TNS1Q9HBL0 1735 aaKnown RBP11.78□□□□□ -0.52
TMEM116-216ENST00000552800 GOLIM4O00461 696 aa11.78□□□□□ -0.52
TMEM116-216ENST00000552800 CYP2E1P05181 493 aaPredicted RBP11.78□□□□□ -0.52
TMEM116-216ENST00000552800 PSMA5P28066 241 aa11.78□□□□□ -0.52
TMEM116-216ENST00000552800 ADD2P35612 726 aa11.78□□□□□ -0.52
TMEM116-216ENST00000552800 SCARF1Q14162 830 aa11.78□□□□□ -0.52
TMEM116-216ENST00000552800 KRT32Q14532 448 aa11.78□□□□□ -0.52
TMEM116-216ENST00000552800 ALX1Q15699 326 aa11.78□□□□□ -0.52
TMEM116-216ENST00000552800 CREB3L3Q68CJ9 461 aa11.78□□□□□ -0.52
TMEM116-216ENST00000552800 TMC4Q7Z404 712 aa11.78□□□□□ -0.52
TMEM116-216ENST00000552800 APPBP2Q92624 585 aa11.78□□□□□ -0.52
TMEM116-216ENST00000552800 EDC3Q96F86 508 aaKnown RBP11.78□□□□□ -0.52
TMEM116-216ENST00000552800 CRAMP1Q96RY5 1269 aa11.78□□□□□ -0.52
TMEM116-216ENST00000552800 RBM8AQ9Y5S9 174 aaKnown RBP11.78□□□□□ -0.52
TMEM116-216ENST00000552800 ZMYM6O95789 1325 aa11.78□□□□□ -0.52
TMEM116-216ENST00000552800 TCRBV5S4A2TA0A5A2 114 aa11.77□□□□□ -0.53
TMEM116-216ENST00000552800 POLRMTO00411 1230 aaKnown RBP11.77□□□□□ -0.53
TMEM116-216ENST00000552800 SLC27A2O14975 620 aa11.77□□□□□ -0.53
TMEM116-216ENST00000552800 BBOX1O75936 387 aa11.77□□□□□ -0.53
TMEM116-216ENST00000552800 SERPINB2P05120 415 aa11.77□□□□□ -0.53
TMEM116-216ENST00000552800 PDIA4P13667 645 aaKnown RBP11.77□□□□□ -0.53
TMEM116-216ENST00000552800 ZKSCAN1P17029 563 aaPredicted RBP11.77□□□□□ -0.53
TMEM116-216ENST00000552800 ZAP70P43403 619 aa11.77□□□□□ -0.53
TMEM116-216ENST00000552800 NEK4P51957 841 aa11.77□□□□□ -0.53
TMEM116-216ENST00000552800 DSG2Q14126 1118 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms