RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 NHSQ6T4R5 1651 aa16.58■□□□□ 0.24
RAB3IP-216ENST00000552199 SCN7AQ01118 1682 aa16.57■□□□□ 0.24
RAB3IP-216ENST00000552199 TCRBV5S4A2TA0A5A2 114 aa16.57■□□□□ 0.24
RAB3IP-216ENST00000552199 JAK2O60674 1132 aa16.57■□□□□ 0.24
RAB3IP-216ENST00000552199 PDE6AP16499 860 aa16.57■□□□□ 0.24
RAB3IP-216ENST00000552199 CSPP1Q1MSJ5 1256 aa16.57■□□□□ 0.24
RAB3IP-216ENST00000552199 LRSAM1Q6UWE0 723 aa16.57■□□□□ 0.24
RAB3IP-216ENST00000552199 CDC5LQ99459 802 aaKnown RBP16.57■□□□□ 0.24
RAB3IP-216ENST00000552199 ZNF532Q9HCE3 1301 aa16.57■□□□□ 0.24
RAB3IP-216ENST00000552199 DOCK2Q92608 1830 aa16.57■□□□□ 0.24
RAB3IP-216ENST00000552199 RPS6KA4O75676 772 aa16.57■□□□□ 0.24
RAB3IP-216ENST00000552199 HAND2P61296 217 aa16.57■□□□□ 0.24
RAB3IP-216ENST00000552199 UBE2HP62256 183 aa16.57■□□□□ 0.24
RAB3IP-216ENST00000552199 CHRNDQ07001 517 aa16.57■□□□□ 0.24
RAB3IP-216ENST00000552199 RASGRF1Q13972 1273 aa16.57■□□□□ 0.24
RAB3IP-216ENST00000552199 SF3B3Q15393 1217 aaKnown RBP16.57■□□□□ 0.24
RAB3IP-216ENST00000552199 SMARCC2Q8TAQ2 1214 aa16.57■□□□□ 0.24
RAB3IP-216ENST00000552199 BCL2L12Q9HB09 334 aa16.57■□□□□ 0.24
RAB3IP-216ENST00000552199 WWC3Q9ULE0 1092 aa16.57■□□□□ 0.24
RAB3IP-216ENST00000552199 SYCE3A1L190 88 aa16.56■□□□□ 0.24
RAB3IP-216ENST00000552199 ZNF213O14771 459 aa16.56■□□□□ 0.24
RAB3IP-216ENST00000552199 FIBPO43427 364 aa16.56■□□□□ 0.24
RAB3IP-216ENST00000552199 ZNF274Q96GC6 653 aaPredicted RBP16.56■□□□□ 0.24
RAB3IP-216ENST00000552199 NARFQ9UHQ1 456 aa16.56■□□□□ 0.24
RAB3IP-216ENST00000552199 CASZ1Q86V15 1759 aa16.56■□□□□ 0.24
RAB3IP-216ENST00000552199 COL4A1P02462 1669 aa16.55■□□□□ 0.24
RAB3IP-216ENST00000552199 NASPP49321 788 aaPredicted RBP16.55■□□□□ 0.24
RAB3IP-216ENST00000552199 SLC10A5Q5PT55 438 aa16.55■□□□□ 0.24
RAB3IP-216ENST00000552199 TBC1D9BQ66K14 1250 aa16.55■□□□□ 0.24
RAB3IP-216ENST00000552199 CHST3Q7LGC8 479 aa16.55■□□□□ 0.24
RAB3IP-216ENST00000552199 BCAMP50895 628 aa16.55■□□□□ 0.24
RAB3IP-216ENST00000552199 EVCP57679 992 aa16.55■□□□□ 0.24
RAB3IP-216ENST00000552199 C3orf67Q6ZVT6 689 aa16.55■□□□□ 0.24
RAB3IP-216ENST00000552199 SMIM5Q71RC9 77 aa16.55■□□□□ 0.24
RAB3IP-216ENST00000552199 ANKRD18AQ8IVF6 992 aa16.55■□□□□ 0.24
RAB3IP-216ENST00000552199 PDIA3P30101 505 aaKnown RBP16.54■□□□□ 0.24
RAB3IP-216ENST00000552199 MAP3K12Q12852 859 aa16.54■□□□□ 0.24
RAB3IP-216ENST00000552199 BICDL1Q6ZP65 573 aa16.54■□□□□ 0.24
RAB3IP-216ENST00000552199 FERMT3Q86UX7 667 aa16.54■□□□□ 0.24
RAB3IP-216ENST00000552199 MB21D2Q8IYB1 491 aaPredicted RBP16.54■□□□□ 0.24
RAB3IP-216ENST00000552199 NSUN7Q8NE18 718 aaKnown RBP16.54■□□□□ 0.24
RAB3IP-216ENST00000552199 NCOA7Q8NI08 942 aa16.54■□□□□ 0.24
RAB3IP-216ENST00000552199 CHMP4CQ96CF2 233 aa16.54■□□□□ 0.24
RAB3IP-216ENST00000552199 RBSNQ9H1K0 784 aa16.54■□□□□ 0.24
RAB3IP-216ENST00000552199 CTDNEP1O95476 244 aa16.53■□□□□ 0.24
RAB3IP-216ENST00000552199 MCM5P33992 734 aa16.53■□□□□ 0.24
RAB3IP-216ENST00000552199 KRT85P78386 507 aa16.53■□□□□ 0.24
RAB3IP-216ENST00000552199 STRBPQ96SI9 672 aaKnown RBP16.53■□□□□ 0.24
RAB3IP-216ENST00000552199 CCNL1Q9UK58 526 aaPredicted RBP16.53■□□□□ 0.24
RAB3IP-216ENST00000552199 A0A1B0GUL6 1792 aa16.53■□□□□ 0.24
RAB3IP-216ENST00000552199 PRC1O43663 620 aa16.53■□□□□ 0.24
RAB3IP-216ENST00000552199 PHF14O94880 888 aa16.53■□□□□ 0.24
RAB3IP-216ENST00000552199 CCT2P78371 535 aaKnown RBP16.53■□□□□ 0.24
RAB3IP-216ENST00000552199 HMGN5P82970 282 aaKnown RBP16.53■□□□□ 0.24
RAB3IP-216ENST00000552199 FAM182BQ5T319 152 aa16.53■□□□□ 0.24
RAB3IP-216ENST00000552199 FAM184AQ8NB25 1140 aa16.53■□□□□ 0.24
RAB3IP-216ENST00000552199 CERKQ8TCT0 537 aa16.53■□□□□ 0.24
RAB3IP-216ENST00000552199 AIDAQ96BJ3 306 aa16.53■□□□□ 0.24
RAB3IP-216ENST00000552199 DDX11Q96FC9 970 aa16.53■□□□□ 0.24
RAB3IP-216ENST00000552199 NYXQ9GZU5 481 aa16.53■□□□□ 0.24
RAB3IP-216ENST00000552199 BSDC1Q9NW68 430 aaPredicted RBP16.53■□□□□ 0.24
RAB3IP-216ENST00000552199 SRP68Q9UHB9 627 aaKnown RBP16.53■□□□□ 0.24
RAB3IP-216ENST00000552199 TAF1P21675 1872 aa16.52■□□□□ 0.24
RAB3IP-216ENST00000552199 WDR19Q8NEZ3 1342 aa16.52■□□□□ 0.24
RAB3IP-216ENST00000552199 GNPATO15228 680 aa16.52■□□□□ 0.23
RAB3IP-216ENST00000552199 GTF2E1P29083 439 aaPredicted RBP16.52■□□□□ 0.23
RAB3IP-216ENST00000552199 ALX1Q15699 326 aa16.52■□□□□ 0.23
RAB3IP-216ENST00000552199 RALYLQ86SE5 291 aaKnown RBP16.52■□□□□ 0.23
RAB3IP-216ENST00000552199 MAGEB6Q8N7X4 407 aa16.52■□□□□ 0.23
RAB3IP-216ENST00000552199 GJD4Q96KN9 370 aaPredicted RBP16.52■□□□□ 0.23
RAB3IP-216ENST00000552199 NBPF3Q9H094 633 aa16.52■□□□□ 0.23
RAB3IP-216ENST00000552199 LY75O60449 1722 aa16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 COL24A1Q17RW2 1714 aa16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 PTPDC1A2A3K4 754 aa16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 ZPR1O75312 459 aa16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 APPP05067 770 aa16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 ANTXR2P58335 489 aa16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 CCDC183Q5T5S1 534 aa16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 SETDB2Q96T68 719 aa16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 GPHNQ9NQX3 736 aaPredicted RBP16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 NAP1L2Q9ULW6 460 aaPredicted RBP16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 TAF1LQ8IZX4 1826 aa16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 SBF2Q86WG5 1849 aa16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 PATL2C9JE40 543 aaKnown RBP16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 H3BQV1 296 aa16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 RESTQ13127 1097 aa16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 UBE4AQ14139 1066 aa16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 IFFO2Q5TF58 517 aa16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 MEX3CQ5U5Q3 659 aaKnown RBP16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 FAM173BQ6P4H8 233 aa16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 NCOA5Q9HCD5 579 aaKnown RBP16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 RTCBQ9Y3I0 505 aaKnown RBP16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 KIF3AQ9Y496 699 aa16.51■□□□□ 0.23
RAB3IP-216ENST00000552199 ELP1O95163 1332 aa16.5■□□□□ 0.23
RAB3IP-216ENST00000552199 ZMYM6O95789 1325 aa16.5■□□□□ 0.23
RAB3IP-216ENST00000552199 SALL1Q9NSC2 1324 aa16.5■□□□□ 0.23
RAB3IP-216ENST00000552199 TTC6Q86TZ1 520 aa16.5■□□□□ 0.23
RAB3IP-216ENST00000552199 ZSCAN16Q9H4T2 348 aaPredicted RBP16.5■□□□□ 0.23
RAB3IP-216ENST00000552199 MINPP1Q9UNW1 487 aa16.5■□□□□ 0.23
RAB3IP-216ENST00000552199 ZNF804BA4D1E1 1349 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms