RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 NBPF12Q5TAG4 269 aaPredicted RBP16.37■□□□□ 0.21
SNRPF-204ENST00000552085 KIAA0825Q8IV33 1275 aa16.37■□□□□ 0.21
SNRPF-204ENST00000552085 U2AF1L4Q8WU68 220 aaKnown RBP16.37■□□□□ 0.21
SNRPF-204ENST00000552085 ISCA1Q9BUE6 129 aa16.37■□□□□ 0.21
SNRPF-204ENST00000552085 RIPOR2Q9Y4F9 1068 aa16.37■□□□□ 0.21
SNRPF-204ENST00000552085 RPTORQ8N122 1335 aa16.37■□□□□ 0.21
SNRPF-204ENST00000552085 CLSPNQ9HAW4 1339 aa16.37■□□□□ 0.21
SNRPF-204ENST00000552085 SPEF2Q9C093 1822 aa16.36■□□□□ 0.21
SNRPF-204ENST00000552085 GTF2A2P52657 109 aa16.36■□□□□ 0.21
SNRPF-204ENST00000552085 RAET1EQ8TD07 263 aa16.36■□□□□ 0.21
SNRPF-204ENST00000552085 TRIM47Q96LD4 638 aa16.36■□□□□ 0.21
SNRPF-204ENST00000552085 SRRDQ9UH36 339 aa16.36■□□□□ 0.21
SNRPF-204ENST00000552085 ZNF804BA4D1E1 1349 aa16.36■□□□□ 0.21
SNRPF-204ENST00000552085 UBXN2AP68543 259 aa16.35■□□□□ 0.21
SNRPF-204ENST00000552085 CNGB1Q14028 1251 aaPredicted RBP16.35■□□□□ 0.21
SNRPF-204ENST00000552085 DLGAP5Q15398 846 aa16.35■□□□□ 0.21
SNRPF-204ENST00000552085 MGAMO43451 1857 aa16.34■□□□□ 0.21
SNRPF-204ENST00000552085 ATP5J2-PTCD1G3V325 749 aa16.34■□□□□ 0.21
SNRPF-204ENST00000552085 SGPL1O95470 568 aa16.34■□□□□ 0.21
SNRPF-204ENST00000552085 HOXD10P28358 340 aa16.34■□□□□ 0.21
SNRPF-204ENST00000552085 COA1Q9GZY4 146 aa16.34■□□□□ 0.21
SNRPF-204ENST00000552085 BIN2Q9UBW5 565 aaPredicted RBP16.34■□□□□ 0.21
SNRPF-204ENST00000552085 ECM2O94769 699 aaPredicted RBP16.33■□□□□ 0.2
SNRPF-204ENST00000552085 TTLL5Q6EMB2 1281 aa16.33■□□□□ 0.2
SNRPF-204ENST00000552085 TDHQ8IZJ6 230 aa16.33■□□□□ 0.2
SNRPF-204ENST00000552085 PLBD2Q8NHP8 589 aa16.33■□□□□ 0.2
SNRPF-204ENST00000552085 CNKSR2Q8WXI2 1034 aa16.33■□□□□ 0.2
SNRPF-204ENST00000552085 ZCCHC17Q9NP64 241 aaKnown RBP16.33■□□□□ 0.2
SNRPF-204ENST00000552085 OSBPP22059 807 aa16.32■□□□□ 0.2
SNRPF-204ENST00000552085 CTGFP29279 349 aa16.32■□□□□ 0.2
SNRPF-204ENST00000552085 PSMC4P43686 418 aa16.32■□□□□ 0.2
SNRPF-204ENST00000552085 CCDC152Q4G0S7 254 aa16.32■□□□□ 0.2
SNRPF-204ENST00000552085 ANKRD18AQ8IVF6 992 aa16.32■□□□□ 0.2
SNRPF-204ENST00000552085 MTMR14Q8NCE2 650 aa16.32■□□□□ 0.2
SNRPF-204ENST00000552085 HELBQ8NG08 1087 aaPredicted RBP16.32■□□□□ 0.2
SNRPF-204ENST00000552085 UNC93B1Q9H1C4 597 aa16.32■□□□□ 0.2
SNRPF-204ENST00000552085 TSPYL4Q9UJ04 414 aa16.32■□□□□ 0.2
SNRPF-204ENST00000552085 MYPNQ86TC9 1320 aa16.31■□□□□ 0.2
SNRPF-204ENST00000552085 CAPN2P17655 700 aa16.31■□□□□ 0.2
SNRPF-204ENST00000552085 GUCD1Q96NT3 240 aa16.31■□□□□ 0.2
SNRPF-204ENST00000552085 VCANP13611 3396 aa16.3■□□□□ 0.2
SNRPF-204ENST00000552085 CLRN2A0PK11 232 aa16.3■□□□□ 0.2
SNRPF-204ENST00000552085 MYO1BO43795 1136 aa16.3■□□□□ 0.2
SNRPF-204ENST00000552085 HSP90B1P14625 803 aaKnown RBP16.3■□□□□ 0.2
SNRPF-204ENST00000552085 PLA2G5P39877 138 aa16.3■□□□□ 0.2
SNRPF-204ENST00000552085 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.3■□□□□ 0.2
SNRPF-204ENST00000552085 C7orf61Q8IZ16 206 aa16.3■□□□□ 0.2
SNRPF-204ENST00000552085 VEZTQ9HBM0 779 aa16.3■□□□□ 0.2
SNRPF-204ENST00000552085 ZMYND8Q9ULU4 1186 aaPredicted RBP16.3■□□□□ 0.2
SNRPF-204ENST00000552085 FMNL1O95466 1100 aaPredicted RBP16.29■□□□□ 0.2
SNRPF-204ENST00000552085 TFRCP02786 760 aaKnown RBP16.29■□□□□ 0.2
SNRPF-204ENST00000552085 NEFMP07197 916 aa16.29■□□□□ 0.2
SNRPF-204ENST00000552085 TRIM26Q12899 539 aaPredicted RBP16.29■□□□□ 0.2
SNRPF-204ENST00000552085 TRIM28Q13263 835 aaKnown RBP16.29■□□□□ 0.2
SNRPF-204ENST00000552085 RASA3Q14644 834 aa16.29■□□□□ 0.2
SNRPF-204ENST00000552085 C17orf99Q6UX52 265 aa16.29■□□□□ 0.2
SNRPF-204ENST00000552085 PCDHAC2Q9Y5I4 1007 aa16.29■□□□□ 0.2
SNRPF-204ENST00000552085 IRS2Q9Y4H2 1338 aa16.28■□□□□ 0.2
SNRPF-204ENST00000552085 BTBD19C9JJ37 291 aa16.28■□□□□ 0.2
SNRPF-204ENST00000552085 CETPP11597 493 aa16.28■□□□□ 0.2
SNRPF-204ENST00000552085 MAGEA10P43363 369 aaPredicted RBP16.28■□□□□ 0.2
SNRPF-204ENST00000552085 GTF2IP78347 998 aa16.28■□□□□ 0.2
SNRPF-204ENST00000552085 VGLL4Q14135 290 aa16.28■□□□□ 0.2
SNRPF-204ENST00000552085 FAM109BQ6ICB4 259 aaPredicted RBP16.28■□□□□ 0.2
SNRPF-204ENST00000552085 TXNRD3Q86VQ6 643 aa16.28■□□□□ 0.2
SNRPF-204ENST00000552085 ZBTB38Q8NAP3 1195 aaPredicted RBP16.28■□□□□ 0.2
SNRPF-204ENST00000552085 SLAIN1Q8ND83 568 aa16.28■□□□□ 0.2
SNRPF-204ENST00000552085 CCDC85AQ96PX6 553 aaPredicted RBP16.28■□□□□ 0.2
SNRPF-204ENST00000552085 RAPGEFL1Q9UHV5 662 aa16.28■□□□□ 0.2
SNRPF-204ENST00000552085 SPTBN5Q9NRC6 3674 aaKnown RBP16.27■□□□□ 0.2
SNRPF-204ENST00000552085 CCT4P50991 539 aaKnown RBP16.27■□□□□ 0.2
SNRPF-204ENST00000552085 SYMPKQ92797 1274 aaKnown RBP16.27■□□□□ 0.2
SNRPF-204ENST00000552085 PAWRQ96IZ0 340 aaKnown RBP16.27■□□□□ 0.2
SNRPF-204ENST00000552085 UBE2OQ9C0C9 1292 aaKnown RBP16.27■□□□□ 0.2
SNRPF-204ENST00000552085 CPA4Q9UI42 421 aa16.27■□□□□ 0.2
SNRPF-204ENST00000552085 CSADQ9Y600 493 aa16.27■□□□□ 0.2
SNRPF-204ENST00000552085 ARAP2Q8WZ64 1704 aa16.27■□□□□ 0.19
SNRPF-204ENST00000552085 MYH3P11055 1940 aa16.26■□□□□ 0.19
SNRPF-204ENST00000552085 SPDYE2BA6NHP3 402 aa16.26■□□□□ 0.19
SNRPF-204ENST00000552085 POTEB2H3BUK9 544 aa16.26■□□□□ 0.19
SNRPF-204ENST00000552085 PDE8AO60658 829 aa16.26■□□□□ 0.19
SNRPF-204ENST00000552085 SPDYE6P0CI01 402 aa16.26■□□□□ 0.19
SNRPF-204ENST00000552085 MAP3K9P80192 1104 aa16.26■□□□□ 0.19
SNRPF-204ENST00000552085 CFAP100Q494V2 611 aa16.26■□□□□ 0.19
SNRPF-204ENST00000552085 NECAB2Q7Z6G3 386 aa16.26■□□□□ 0.19
SNRPF-204ENST00000552085 FAM122AQ96E09 287 aa16.26■□□□□ 0.19
SNRPF-204ENST00000552085 PRMT6Q96LA8 375 aaPredicted RBP16.26■□□□□ 0.19
SNRPF-204ENST00000552085 MINPP1Q9UNW1 487 aa16.26■□□□□ 0.19
SNRPF-204ENST00000552085 SYN1P17600 705 aa16.25■□□□□ 0.19
SNRPF-204ENST00000552085 PRKCZQ05513 592 aa16.25■□□□□ 0.19
SNRPF-204ENST00000552085 NFE2L2Q16236 605 aa16.25■□□□□ 0.19
SNRPF-204ENST00000552085 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.25■□□□□ 0.191e-16■■■□□ 15.2
SNRPF-204ENST00000552085 DEFB118Q96PH6 123 aa16.25■□□□□ 0.19
SNRPF-204ENST00000552085 CHPF2Q9P2E5 772 aa16.25■□□□□ 0.19
SNRPF-204ENST00000552085 AOX1Q06278 1338 aa16.24■□□□□ 0.19
SNRPF-204ENST00000552085 SPDYE5A6NIY4 337 aa16.24■□□□□ 0.19
SNRPF-204ENST00000552085 CERS5Q8N5B7 392 aa16.24■□□□□ 0.19
SNRPF-204ENST00000552085 DIS3LQ8TF46 1054 aaKnown RBP16.24■□□□□ 0.19
SNRPF-204ENST00000552085 FAM161BQ96MY7 647 aa16.24■□□□□ 0.19
SNRPF-204ENST00000552085 CDC5LQ99459 802 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms