RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 FARP2O94887 1054 aaPredicted RBP13.49□□□□□ -0.25
SLC48A1-209ENST00000552003 BMP8BP34820 402 aa13.49□□□□□ -0.25
SLC48A1-209ENST00000552003 STRIP1Q5VSL9 837 aa13.49□□□□□ -0.25
SLC48A1-209ENST00000552003 CDAN1Q8IWY9 1227 aa13.49□□□□□ -0.25
SLC48A1-209ENST00000552003 GUCD1Q96NT3 240 aa13.49□□□□□ -0.25
SLC48A1-209ENST00000552003 XDHP47989 1333 aa13.48□□□□□ -0.25
SLC48A1-209ENST00000552003 CCL15-CCL14A0A0B4J2E2 113 aa13.48□□□□□ -0.25
SLC48A1-209ENST00000552003 EVI5O60447 810 aa13.48□□□□□ -0.25
SLC48A1-209ENST00000552003 COL9A1P20849 921 aa13.48□□□□□ -0.25
SLC48A1-209ENST00000552003 ATP2B4P23634 1241 aa13.48□□□□□ -0.25
SLC48A1-209ENST00000552003 ARHGEF6Q15052 776 aa13.48□□□□□ -0.25
SLC48A1-209ENST00000552003 CCL15Q16663 113 aa13.48□□□□□ -0.25
SLC48A1-209ENST00000552003 LRIT3Q3SXY7 679 aa13.48□□□□□ -0.25
SLC48A1-209ENST00000552003 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.48□□□□□ -0.25
SLC48A1-209ENST00000552003 ANKRD13DQ6ZTN6 518 aa13.48□□□□□ -0.25
SLC48A1-209ENST00000552003 ANKRD13AQ8IZ07 590 aa13.48□□□□□ -0.25
SLC48A1-209ENST00000552003 U2AF1L4Q8WU68 220 aaKnown RBP13.48□□□□□ -0.25
SLC48A1-209ENST00000552003 FBXW7Q969H0 707 aa13.48□□□□□ -0.25
SLC48A1-209ENST00000552003 TRIM47Q96LD4 638 aa13.48□□□□□ -0.25
SLC48A1-209ENST00000552003 CCDC85AQ96PX6 553 aaPredicted RBP13.48□□□□□ -0.25
SLC48A1-209ENST00000552003 TLR2O60603 784 aa13.47□□□□□ -0.25
SLC48A1-209ENST00000552003 KLRK1P26718 216 aa13.47□□□□□ -0.25
SLC48A1-209ENST00000552003 CERS5Q8N5B7 392 aa13.47□□□□□ -0.25
SLC48A1-209ENST00000552003 NKX2-3Q8TAU0 364 aa13.47□□□□□ -0.25
SLC48A1-209ENST00000552003 RNF208Q9H0X6 261 aa13.47□□□□□ -0.25
SLC48A1-209ENST00000552003 UNC93B1Q9H1C4 597 aa13.47□□□□□ -0.25
SLC48A1-209ENST00000552003 SRRDQ9UH36 339 aa13.47□□□□□ -0.25
SLC48A1-209ENST00000552003 MED23Q9ULK4 1368 aa13.46□□□□□ -0.25
SLC48A1-209ENST00000552003 ZNF804BA4D1E1 1349 aa13.46□□□□□ -0.25
SLC48A1-209ENST00000552003 MYO3BQ8WXR4 1341 aa13.46□□□□□ -0.25
SLC48A1-209ENST00000552003 CLRN2A0PK11 232 aa13.46□□□□□ -0.25
SLC48A1-209ENST00000552003 OSBPP22059 807 aa13.46□□□□□ -0.25
SLC48A1-209ENST00000552003 GRK4P32298 578 aa13.46□□□□□ -0.25
SLC48A1-209ENST00000552003 KRT24Q2M2I5 525 aa13.46□□□□□ -0.25
SLC48A1-209ENST00000552003 JARID2Q92833 1246 aaPredicted RBP13.46□□□□□ -0.25
SLC48A1-209ENST00000552003 RIPOR2Q9Y4F9 1068 aa13.46□□□□□ -0.25
SLC48A1-209ENST00000552003 SGPL1O95470 568 aa13.45□□□□□ -0.26
SLC48A1-209ENST00000552003 IREB2P48200 963 aaKnown RBP13.45□□□□□ -0.26
SLC48A1-209ENST00000552003 PLBD2Q8NHP8 589 aa13.45□□□□□ -0.26
SLC48A1-209ENST00000552003 PRMT6Q96LA8 375 aaPredicted RBP13.45□□□□□ -0.26
SLC48A1-209ENST00000552003 ZMYND8Q9ULU4 1186 aaPredicted RBP13.45□□□□□ -0.26
SLC48A1-209ENST00000552003 RPTORQ8N122 1335 aa13.44□□□□□ -0.26
SLC48A1-209ENST00000552003 SPEF2Q9C093 1822 aa13.44□□□□□ -0.26
SLC48A1-209ENST00000552003 BTBD19C9JJ37 291 aa13.44□□□□□ -0.26
SLC48A1-209ENST00000552003 GNRH1P01148 92 aa13.44□□□□□ -0.26
SLC48A1-209ENST00000552003 PRMT2P55345 433 aa13.44□□□□□ -0.26
SLC48A1-209ENST00000552003 SUPT20HL1Q3ZLR7 823 aa13.44□□□□□ -0.26
SLC48A1-209ENST00000552003 TTLL5Q6EMB2 1281 aa13.44□□□□□ -0.26
SLC48A1-209ENST00000552003 C17orf99Q6UX52 265 aa13.44□□□□□ -0.26
SLC48A1-209ENST00000552003 MTMR14Q8NCE2 650 aa13.44□□□□□ -0.26
SLC48A1-209ENST00000552003 DIS3LQ8TF46 1054 aaKnown RBP13.44□□□□□ -0.26
SLC48A1-209ENST00000552003 PLEKHF1Q96S99 279 aa13.44□□□□□ -0.26
SLC48A1-209ENST00000552003 TSPYL4Q9UJ04 414 aa13.44□□□□□ -0.26
SLC48A1-209ENST00000552003 PPP2R3BQ9Y5P8 575 aa13.44□□□□□ -0.26
SLC48A1-209ENST00000552003 CLSPNQ9HAW4 1339 aa13.43□□□□□ -0.26
SLC48A1-209ENST00000552003 PSMC4P43686 418 aa13.43□□□□□ -0.26
SLC48A1-209ENST00000552003 GTF2IP78347 998 aa13.43□□□□□ -0.26
SLC48A1-209ENST00000552003 VGLL4Q14135 290 aa13.43□□□□□ -0.26
SLC48A1-209ENST00000552003 RASA3Q14644 834 aa13.43□□□□□ -0.26
SLC48A1-209ENST00000552003 DLGAP5Q15398 846 aa13.43□□□□□ -0.26
SLC48A1-209ENST00000552003 CCER1Q8TC90 406 aaPredicted RBP13.43□□□□□ -0.26
SLC48A1-209ENST00000552003 COA1Q9GZY4 146 aa13.43□□□□□ -0.26
SLC48A1-209ENST00000552003 CHPF2Q9P2E5 772 aa13.43□□□□□ -0.26
SLC48A1-209ENST00000552003 CPA4Q9UI42 421 aa13.43□□□□□ -0.26
SLC48A1-209ENST00000552003 MINPP1Q9UNW1 487 aa13.43□□□□□ -0.26
SLC48A1-209ENST00000552003 NUDCQ9Y266 331 aa13.43□□□□□ -0.26
SLC48A1-209ENST00000552003 POTEB2H3BUK9 544 aa13.42□□□□□ -0.26
SLC48A1-209ENST00000552003 MMP14P50281 582 aa13.42□□□□□ -0.26
SLC48A1-209ENST00000552003 GTF2A2P52657 109 aa13.42□□□□□ -0.26
SLC48A1-209ENST00000552003 TRIM28Q13263 835 aaKnown RBP13.42□□□□□ -0.26
SLC48A1-209ENST00000552003 PAWRQ96IZ0 340 aaKnown RBP13.42□□□□□ -0.26
SLC48A1-209ENST00000552003 TEPSINQ96N21 525 aa13.42□□□□□ -0.26
SLC48A1-209ENST00000552003 TIMELESSQ9UNS1 1208 aa13.42□□□□□ -0.26
SLC48A1-209ENST00000552003 ADGRA2Q96PE1 1338 aa13.41□□□□□ -0.26
SLC48A1-209ENST00000552003 SPDYE2BA6NHP3 402 aa13.41□□□□□ -0.26
SLC48A1-209ENST00000552003 SPDYE6P0CI01 402 aa13.41□□□□□ -0.26
SLC48A1-209ENST00000552003 SYN1P17600 705 aa13.41□□□□□ -0.26
SLC48A1-209ENST00000552003 MAGEA10P43363 369 aaPredicted RBP13.41□□□□□ -0.26
SLC48A1-209ENST00000552003 CCT4P50991 539 aaKnown RBP13.41□□□□□ -0.26
SLC48A1-209ENST00000552003 KIF22Q14807 665 aa13.41□□□□□ -0.26
SLC48A1-209ENST00000552003 NFE2L2Q16236 605 aa13.41□□□□□ -0.26
SLC48A1-209ENST00000552003 CFAP100Q494V2 611 aa13.41□□□□□ -0.26
SLC48A1-209ENST00000552003 TDHQ8IZJ6 230 aa13.41□□□□□ -0.26
SLC48A1-209ENST00000552003 ZBTB38Q8NAP3 1195 aaPredicted RBP13.41□□□□□ -0.26
SLC48A1-209ENST00000552003 RAET1EQ8TD07 263 aa13.41□□□□□ -0.26
SLC48A1-209ENST00000552003 CFAP53Q96M91 514 aa13.41□□□□□ -0.26
SLC48A1-209ENST00000552003 GABRQQ9UN88 632 aa13.41□□□□□ -0.26
SLC48A1-209ENST00000552003 MYPNQ86TC9 1320 aa13.4□□□□□ -0.26
SLC48A1-209ENST00000552003 PRKCZQ05513 592 aa13.4□□□□□ -0.26
SLC48A1-209ENST00000552003 ANKRD18AQ8IVF6 992 aa13.4□□□□□ -0.26
SLC48A1-209ENST00000552003 C7orf61Q8IZ16 206 aa13.4□□□□□ -0.26
SLC48A1-209ENST00000552003 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.4□□□□□ -0.26
SLC48A1-209ENST00000552003 FAM161BQ96MY7 647 aa13.4□□□□□ -0.26
SLC48A1-209ENST00000552003 VEZTQ9HBM0 779 aa13.4□□□□□ -0.26
SLC48A1-209ENST00000552003 MGAMO43451 1857 aa13.4□□□□□ -0.26
SLC48A1-209ENST00000552003 PPP2R1AP30153 589 aa13.39□□□□□ -0.27
SLC48A1-209ENST00000552003 CCDC152Q4G0S7 254 aa13.39□□□□□ -0.27
SLC48A1-209ENST00000552003 CRISPLD2Q9H0B8 497 aa13.39□□□□□ -0.27
SLC48A1-209ENST00000552003 DOCK3Q8IZD9 2030 aa13.39□□□□□ -0.27
SLC48A1-209ENST00000552003 IRS2Q9Y4H2 1338 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms