RNA–Protein interactions for RNA: ENST00000551692.5

PACS2-211, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 2

Gene PACS2, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-211ENST00000551692 C10orf71Q711Q0 1435 aa16.29■□□□□ 0.2
PACS2-211ENST00000551692 GABPB1Q06547 395 aaPredicted RBP16.29■□□□□ 0.2
PACS2-211ENST00000551692 TRAPPC3LQ5T215 181 aa16.29■□□□□ 0.2
PACS2-211ENST00000551692 RASSF4Q9H2L5 321 aa16.29■□□□□ 0.2
PACS2-211ENST00000551692 CTNNA3Q9UI47 895 aa16.29■□□□□ 0.2
PACS2-211ENST00000551692 SH3TC1Q8TE82 1336 aa16.29■□□□□ 0.2
PACS2-211ENST00000551692 SASH1O94885 1247 aa16.28■□□□□ 0.2
PACS2-211ENST00000551692 TBC1D9BQ66K14 1250 aa16.28■□□□□ 0.2
PACS2-211ENST00000551692 KIF1BPQ96EK5 621 aa16.28■□□□□ 0.2
PACS2-211ENST00000551692 TTC41PQ6P2S7 1318 aa16.28■□□□□ 0.2
PACS2-211ENST00000551692 LAMA4Q16363 1823 aa16.28■□□□□ 0.2
PACS2-211ENST00000551692 CAMK4Q16566 473 aa16.28■□□□□ 0.2
PACS2-211ENST00000551692 SNRKQ9NRH2 765 aa16.28■□□□□ 0.2
PACS2-211ENST00000551692 GNPATO15228 680 aa16.27■□□□□ 0.2
PACS2-211ENST00000551692 NEK4P51957 841 aa16.27■□□□□ 0.2
PACS2-211ENST00000551692 SYT10Q6XYQ8 523 aa16.27■□□□□ 0.2
PACS2-211ENST00000551692 UBE3BQ7Z3V4 1068 aa16.27■□□□□ 0.2
PACS2-211ENST00000551692 ATP5J2-PTCD1G3V325 749 aa16.27■□□□□ 0.19
PACS2-211ENST00000551692 CCDC186Q7Z3E2 898 aa16.27■□□□□ 0.19
PACS2-211ENST00000551692 CCAR2Q8N163 923 aaKnown RBP16.27■□□□□ 0.19
PACS2-211ENST00000551692 RIPOR2Q9Y4F9 1068 aa16.27■□□□□ 0.19
PACS2-211ENST00000551692 LRRCC1Q9C099 1032 aa16.27■□□□□ 0.19
PACS2-211ENST00000551692 ZCCHC17Q9NP64 241 aaKnown RBP16.27■□□□□ 0.19
PACS2-211ENST00000551692 POLRMTO00411 1230 aaKnown RBP16.26■□□□□ 0.19
PACS2-211ENST00000551692 SRGAP3O43295 1099 aa16.26■□□□□ 0.19
PACS2-211ENST00000551692 TBC1D2BQ9UPU7 963 aa16.26■□□□□ 0.19
PACS2-211ENST00000551692 FOCADQ5VW36 1801 aa16.26■□□□□ 0.19
PACS2-211ENST00000551692 RHPN1Q8TCX5 695 aa16.26■□□□□ 0.19
PACS2-211ENST00000551692 APBA3O96018 575 aa16.25■□□□□ 0.19
PACS2-211ENST00000551692 HOXA10P31260 410 aaPredicted RBP16.25■□□□□ 0.19
PACS2-211ENST00000551692 TMED8Q6PL24 325 aaPredicted RBP16.25■□□□□ 0.19
PACS2-211ENST00000551692 EPB41L2O43491 1005 aaKnown RBP16.25■□□□□ 0.19
PACS2-211ENST00000551692 USPL1Q5W0Q7 1092 aa16.25■□□□□ 0.19
PACS2-211ENST00000551692 TRIM5Q9C035 493 aa16.25■□□□□ 0.19
PACS2-211ENST00000551692 ST18O60284 1047 aa16.25■□□□□ 0.19
PACS2-211ENST00000551692 PI4K2BQ8TCG2 481 aa16.25■□□□□ 0.19
PACS2-211ENST00000551692 TAOK2Q9UL54 1235 aa16.25■□□□□ 0.19
PACS2-211ENST00000551692 ZNF215Q9UL58 517 aaPredicted RBP16.25■□□□□ 0.19
PACS2-211ENST00000551692 FGFR2P21802 821 aa16.24■□□□□ 0.19
PACS2-211ENST00000551692 KIF18AQ8NI77 898 aa16.24■□□□□ 0.19
PACS2-211ENST00000551692 GNL2Q13823 731 aaKnown RBP16.24■□□□□ 0.19
PACS2-211ENST00000551692 SAMD1Q6SPF0 538 aaPredicted RBP16.24■□□□□ 0.19
PACS2-211ENST00000551692 SNX21Q969T3 373 aa16.24■□□□□ 0.19
PACS2-211ENST00000551692 CCDC34Q96HJ3 373 aa16.24■□□□□ 0.19
PACS2-211ENST00000551692 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.24■□□□□ 0.19
PACS2-211ENST00000551692 IRS4O14654 1257 aaPredicted RBP16.24■□□□□ 0.19
PACS2-211ENST00000551692 C15orf52Q6ZUT6 534 aaKnown RBP16.24■□□□□ 0.19
PACS2-211ENST00000551692 NRBP1Q9UHY1 535 aa16.24■□□□□ 0.19
PACS2-211ENST00000551692 DDX41Q9UJV9 622 aaKnown RBP16.24■□□□□ 0.19
PACS2-211ENST00000551692 IL15P40933 162 aaPredicted RBP16.23■□□□□ 0.19
PACS2-211ENST00000551692 SLC15A2Q16348 729 aa16.23■□□□□ 0.19
PACS2-211ENST00000551692 PDS5AQ29RF7 1337 aaKnown RBP16.23■□□□□ 0.19
PACS2-211ENST00000551692 CACNA1SQ13698 1873 aa16.23■□□□□ 0.19
PACS2-211ENST00000551692 TTC22Q5TAA0 569 aa16.23■□□□□ 0.19
PACS2-211ENST00000551692 FILIP1Q7Z7B0 1213 aa16.23■□□□□ 0.19
PACS2-211ENST00000551692 COL23A1Q86Y22 540 aaPredicted RBP16.23■□□□□ 0.19
PACS2-211ENST00000551692 FER1L6Q2WGJ9 1857 aa16.23■□□□□ 0.19
PACS2-211ENST00000551692 EYA2O00167 538 aa16.22■□□□□ 0.19
PACS2-211ENST00000551692 PDE6BP35913 854 aa16.22■□□□□ 0.19
PACS2-211ENST00000551692 NFIXQ14938 502 aa16.22■□□□□ 0.19
PACS2-211ENST00000551692 UPF3BQ9BZI7 483 aaKnown RBP16.22■□□□□ 0.19
PACS2-211ENST00000551692 LCMT1Q9UIC8 334 aa16.22■□□□□ 0.19
PACS2-211ENST00000551692 DNAJC21Q5F1R6 531 aaKnown RBP16.22■□□□□ 0.19
PACS2-211ENST00000551692 LMBR1LQ6UX01 489 aa16.22■□□□□ 0.19
PACS2-211ENST00000551692 FAM177A1Q8N128 213 aaPredicted RBP16.22■□□□□ 0.19
PACS2-211ENST00000551692 LMAN1P49257 510 aa16.22■□□□□ 0.19
PACS2-211ENST00000551692 KMT5BQ4FZB7 885 aa16.22■□□□□ 0.19
PACS2-211ENST00000551692 DDX60LQ5H9U9 1706 aaKnown RBP16.22■□□□□ 0.19
PACS2-211ENST00000551692 SLC16A10Q8TF71 515 aa16.22■□□□□ 0.19
PACS2-211ENST00000551692 NIP7Q9Y221 180 aaKnown RBP eCLIP16.22■□□□□ 0.19
PACS2-211ENST00000551692 A0A0G2JS52 829 aa16.21■□□□□ 0.19
PACS2-211ENST00000551692 MBD3O95983 291 aa16.21■□□□□ 0.19
PACS2-211ENST00000551692 MROH5Q6ZUA9 1318 aa16.21■□□□□ 0.19
PACS2-211ENST00000551692 SRP68Q9UHB9 627 aaKnown RBP16.21■□□□□ 0.19
PACS2-211ENST00000551692 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.21■□□□□ 0.19
PACS2-211ENST00000551692 MYO5AQ9Y4I1 1855 aaKnown RBP16.21■□□□□ 0.19
PACS2-211ENST00000551692 DHX16O60231 1041 aaKnown RBP16.21■□□□□ 0.18
PACS2-211ENST00000551692 GSPT1P15170 499 aaKnown RBP16.21■□□□□ 0.18
PACS2-211ENST00000551692 PDE1AP54750 535 aa16.21■□□□□ 0.18
PACS2-211ENST00000551692 RNF216Q9NWF9 866 aaPredicted RBP16.21■□□□□ 0.18
PACS2-211ENST00000551692 CLGNO14967 610 aa16.2■□□□□ 0.18
PACS2-211ENST00000551692 ZPR1O75312 459 aa16.2■□□□□ 0.18
PACS2-211ENST00000551692 PHF14O94880 888 aa16.2■□□□□ 0.18
PACS2-211ENST00000551692 DDR1Q08345 913 aa16.2■□□□□ 0.18
PACS2-211ENST00000551692 TEX35Q5T0J7 233 aa16.2■□□□□ 0.18
PACS2-211ENST00000551692 CKAP2LQ8IYA6 745 aa16.2■□□□□ 0.18
PACS2-211ENST00000551692 CCDC88AQ3V6T2 1871 aa16.2■□□□□ 0.18
PACS2-211ENST00000551692 FBXO38Q6PIJ6 1188 aa16.2■□□□□ 0.18
PACS2-211ENST00000551692 NLGN1Q8N2Q7 840 aa16.2■□□□□ 0.18
PACS2-211ENST00000551692 FAM89AQ96GI7 184 aa16.2■□□□□ 0.18
PACS2-211ENST00000551692 KIF2CQ99661 725 aa16.2■□□□□ 0.18
PACS2-211ENST00000551692 DDIT3P35638 169 aa16.2■□□□□ 0.18
PACS2-211ENST00000551692 TRMT112Q9UI30 125 aaKnown RBP16.2■□□□□ 0.18
PACS2-211ENST00000551692 RFC4P35249 363 aa16.19■□□□□ 0.18
PACS2-211ENST00000551692 USP48Q86UV5 1035 aa16.19■□□□□ 0.18
PACS2-211ENST00000551692 KCNQ4P56696 695 aa16.19■□□□□ 0.18
PACS2-211ENST00000551692 EZH2Q15910 746 aaKnown RBP16.19■□□□□ 0.18
PACS2-211ENST00000551692 ERFEQ4G0M1 354 aa16.19■□□□□ 0.18
PACS2-211ENST00000551692 PLEKHA4Q9H4M7 779 aa16.18■□□□□ 0.18
PACS2-211ENST00000551692 PRR5LQ6MZQ0 368 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms