RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 CMTR1Q8N1G2 835 aaKnown RBP4.37□□□□□ -1.71
PTCH1-223ENST00000551623 KLHDC7BQ96G42 594 aa4.37□□□□□ -1.71
PTCH1-223ENST00000551623 MKRN1Q9UHC7 482 aaKnown RBP4.37□□□□□ -1.71
PTCH1-223ENST00000551623 NCANO14594 1321 aa4.37□□□□□ -1.71
PTCH1-223ENST00000551623 WRNQ14191 1432 aaPredicted RBP eCLIP4.37□□□□□ -1.71
PTCH1-223ENST00000551623 PCF11O94913 1555 aaKnown RBP4.36□□□□□ -1.71
PTCH1-223ENST00000551623 CYP26A1O43174 497 aa4.36□□□□□ -1.71
PTCH1-223ENST00000551623 SMNDC1O75940 238 aaKnown RBP eCLIP4.36□□□□□ -1.71
PTCH1-223ENST00000551623 IGFBP4P22692 258 aa4.36□□□□□ -1.71
PTCH1-223ENST00000551623 RXRBP28702 533 aa4.36□□□□□ -1.71
PTCH1-223ENST00000551623 SEC13P55735 322 aa4.36□□□□□ -1.71
PTCH1-223ENST00000551623 ATP11AP98196 1134 aa4.36□□□□□ -1.71
PTCH1-223ENST00000551623 C11orf91Q3C1V1 193 aa4.36□□□□□ -1.71
PTCH1-223ENST00000551623 ADAMTSL4Q6UY14 1074 aa4.36□□□□□ -1.71
PTCH1-223ENST00000551623 KSR1Q8IVT5 923 aa4.36□□□□□ -1.71
PTCH1-223ENST00000551623 KRTAP9-3Q9BYQ3 159 aa4.36□□□□□ -1.71
PTCH1-223ENST00000551623 QTRT2Q9H974 415 aaKnown RBP4.36□□□□□ -1.71
PTCH1-223ENST00000551623 SEC31BQ9NQW1 1179 aa4.36□□□□□ -1.71
PTCH1-223ENST00000551623 KCNMB2Q9Y691 235 aa4.36□□□□□ -1.71
PTCH1-223ENST00000551623 ASXL2Q76L83 1435 aa4.36□□□□□ -1.71
PTCH1-223ENST00000551623 EPRSP07814 1512 aaKnown RBP4.36□□□□□ -1.71
PTCH1-223ENST00000551623 PRRG2O14669 202 aa4.35□□□□□ -1.71
PTCH1-223ENST00000551623 EPHA1P21709 976 aa4.35□□□□□ -1.71
PTCH1-223ENST00000551623 TMEM132AQ24JP5 1023 aa4.35□□□□□ -1.71
PTCH1-223ENST00000551623 LILRA6Q6PI73 481 aa4.35□□□□□ -1.71
PTCH1-223ENST00000551623 SHISA5Q8N114 240 aa4.35□□□□□ -1.71
PTCH1-223ENST00000551623 RUSC1Q9BVN2 902 aa4.35□□□□□ -1.71
PTCH1-223ENST00000551623 DISP3Q9P2K9 1392 aa4.35□□□□□ -1.71
PTCH1-223ENST00000551623 PTPRMP28827 1452 aa4.35□□□□□ -1.71
PTCH1-223ENST00000551623 KDM5BQ9UGL1 1544 aa4.35□□□□□ -1.71
PTCH1-223ENST00000551623 ATP9BO43861 1147 aa4.34□□□□□ -1.71
PTCH1-223ENST00000551623 COL13A1Q5TAT6 717 aaPredicted RBP4.34□□□□□ -1.71
PTCH1-223ENST00000551623 NLRP13Q86W25 1043 aa4.34□□□□□ -1.71
PTCH1-223ENST00000551623 MYO19Q96H55 970 aa4.34□□□□□ -1.71
PTCH1-223ENST00000551623 SPACA7Q96KW9 195 aa4.34□□□□□ -1.71
PTCH1-223ENST00000551623 SLC38A3Q99624 504 aa4.34□□□□□ -1.71
PTCH1-223ENST00000551623 HINFPQ9BQA5 517 aa4.34□□□□□ -1.71
PTCH1-223ENST00000551623 MAGI3Q5TCQ9 1506 aa4.34□□□□□ -1.71
PTCH1-223ENST00000551623 SPATA31D1Q6ZQQ2 1576 aa4.34□□□□□ -1.71
PTCH1-223ENST00000551623 ADAMTSL3P82987 1691 aa4.34□□□□□ -1.71
PTCH1-223ENST00000551623 B8ZZF3 427 aa4.33□□□□□ -1.72
PTCH1-223ENST00000551623 LGR5O75473 907 aa4.33□□□□□ -1.72
PTCH1-223ENST00000551623 NLRP12P59046 1061 aa4.33□□□□□ -1.72
PTCH1-223ENST00000551623 NFKBIBQ15653 356 aa4.33□□□□□ -1.72
PTCH1-223ENST00000551623 PAOXQ6QHF9 649 aa4.33□□□□□ -1.72
PTCH1-223ENST00000551623 TREML1Q86YW5 311 aa4.33□□□□□ -1.72
PTCH1-223ENST00000551623 OR13H1Q8NG92 308 aa4.33□□□□□ -1.72
PTCH1-223ENST00000551623 WNT8BQ93098 351 aa4.33□□□□□ -1.72
PTCH1-223ENST00000551623 RASSF4Q9H2L5 321 aa4.33□□□□□ -1.72
PTCH1-223ENST00000551623 SH2B1Q9NRF2 756 aaPredicted RBP4.33□□□□□ -1.72
PTCH1-223ENST00000551623 TSPOAP1O95153 1857 aa4.32□□□□□ -1.72
PTCH1-223ENST00000551623 ARAP3Q8WWN8 1544 aa4.32□□□□□ -1.72
PTCH1-223ENST00000551623 FAM95CA0A1B0GW59 222 aa4.32□□□□□ -1.72
PTCH1-223ENST00000551623 MEGF11A6BM72 1044 aa4.32□□□□□ -1.72
PTCH1-223ENST00000551623 H3BRJ5 948 aa4.32□□□□□ -1.72
PTCH1-223ENST00000551623 PTPRAP18433 802 aa4.32□□□□□ -1.72
PTCH1-223ENST00000551623 ADMP35318 185 aa4.32□□□□□ -1.72
PTCH1-223ENST00000551623 PIP4K2BP78356 416 aa4.32□□□□□ -1.72
PTCH1-223ENST00000551623 HYAL2Q12891 473 aa4.32□□□□□ -1.72
PTCH1-223ENST00000551623 PLCL1Q15111 1095 aa4.32□□□□□ -1.72
PTCH1-223ENST00000551623 TRIP4Q15650 581 aaPredicted RBP4.32□□□□□ -1.72
PTCH1-223ENST00000551623 ZNF792Q3KQV3 632 aa4.32□□□□□ -1.72
PTCH1-223ENST00000551623 TPRNQ4KMQ1 711 aa4.32□□□□□ -1.72
PTCH1-223ENST00000551623 ATG4DQ86TL0 474 aaPredicted RBP4.32□□□□□ -1.72
PTCH1-223ENST00000551623 FAM168AQ92567 244 aa4.32□□□□□ -1.72
PTCH1-223ENST00000551623 TBC1D32Q96NH3 1257 aa4.32□□□□□ -1.72
PTCH1-223ENST00000551623 UCN2Q96RP3 112 aa4.32□□□□□ -1.72
PTCH1-223ENST00000551623 COG6Q9Y2V7 657 aa4.32□□□□□ -1.72
PTCH1-223ENST00000551623 BIVM-ERCC5R4GMW8 1640 aa4.32□□□□□ -1.72
PTCH1-223ENST00000551623 PTPRGP23470 1445 aa4.31□□□□□ -1.72
PTCH1-223ENST00000551623 FAM177BA6PVY3 158 aa4.31□□□□□ -1.72
PTCH1-223ENST00000551623 BUD31P41223 144 aaPredicted RBP4.31□□□□□ -1.72
PTCH1-223ENST00000551623 ZAR1Q86SH2 424 aa4.31□□□□□ -1.72
PTCH1-223ENST00000551623 CILP2Q8IUL8 1156 aa4.31□□□□□ -1.72
PTCH1-223ENST00000551623 TMEM40Q8WWA1 233 aa4.31□□□□□ -1.72
PTCH1-223ENST00000551623 ADAM19Q9H013 955 aa4.31□□□□□ -1.72
PTCH1-223ENST00000551623 ZMYND15Q9H091 742 aa4.31□□□□□ -1.72
PTCH1-223ENST00000551623 OSGEPQ9NPF4 335 aa4.31□□□□□ -1.72
PTCH1-223ENST00000551623 ZC3H7BQ9UGR2 993 aaKnown RBP4.31□□□□□ -1.72
PTCH1-223ENST00000551623 IQSEC2Q5JU85 1478 aa4.3□□□□□ -1.72
PTCH1-223ENST00000551623 TNIKQ9UKE5 1360 aa4.3□□□□□ -1.72
PTCH1-223ENST00000551623 FOXO3O43524 673 aa4.3□□□□□ -1.72
PTCH1-223ENST00000551623 CABP4P57796 275 aa4.3□□□□□ -1.72
PTCH1-223ENST00000551623 MCM6Q14566 821 aa4.3□□□□□ -1.72
PTCH1-223ENST00000551623 ZNF574Q6ZN55 896 aaPredicted RBP4.3□□□□□ -1.72
PTCH1-223ENST00000551623 WFDC3Q8IUB2 231 aa4.3□□□□□ -1.72
PTCH1-223ENST00000551623 C12orf50Q8NA57 414 aaPredicted RBP4.3□□□□□ -1.72
PTCH1-223ENST00000551623 BHLHE22Q8NFJ8 381 aaPredicted RBP4.3□□□□□ -1.72
PTCH1-223ENST00000551623 ADAMTS19Q8TE59 1207 aa4.3□□□□□ -1.72
PTCH1-223ENST00000551623 BCL7CQ8WUZ0 217 aaPredicted RBP4.3□□□□□ -1.72
PTCH1-223ENST00000551623 VTI1AQ96AJ9 217 aa4.3□□□□□ -1.72
PTCH1-223ENST00000551623 FAM84AQ96KN4 292 aa4.3□□□□□ -1.72
PTCH1-223ENST00000551623 TOX2Q96NM4 488 aa4.3□□□□□ -1.72
PTCH1-223ENST00000551623 PBX4Q9BYU1 374 aa4.3□□□□□ -1.72
PTCH1-223ENST00000551623 PRKAG2Q9UGJ0 569 aa4.3□□□□□ -1.72
PTCH1-223ENST00000551623 LRFN2Q9ULH4 789 aa4.3□□□□□ -1.72
PTCH1-223ENST00000551623 SLC5A6Q9Y289 635 aa4.3□□□□□ -1.72
PTCH1-223ENST00000551623 WDR7Q9Y4E6 1490 aa4.3□□□□□ -1.72
PTCH1-223ENST00000551623 UACAQ9BZF9 1416 aa4.29□□□□□ -1.72
PTCH1-223ENST00000551623 PHLDB1Q86UU1 1377 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms