RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 KLRK1P26718 216 aa12.57□□□□□ -0.4
NEK3-203ENST00000551355 KIAA2012Q0VF49 1180 aa12.57□□□□□ -0.4
NEK3-203ENST00000551355 SCARF1Q14162 830 aa12.57□□□□□ -0.4
NEK3-203ENST00000551355 TXNRD3Q86VQ6 643 aa12.57□□□□□ -0.4
NEK3-203ENST00000551355 TBC1D22AQ8WUA7 517 aa12.57□□□□□ -0.4
NEK3-203ENST00000551355 SNRKQ9NRH2 765 aa12.57□□□□□ -0.4
NEK3-203ENST00000551355 SPEF2Q9C093 1822 aa12.57□□□□□ -0.4
NEK3-203ENST00000551355 RAD50Q92878 1312 aa12.57□□□□□ -0.4
NEK3-203ENST00000551355 SALL1Q9NSC2 1324 aa12.57□□□□□ -0.4
NEK3-203ENST00000551355 SNED1Q8TER0 1413 aa12.56□□□□□ -0.4
NEK3-203ENST00000551355 RNF113AO15541 343 aaKnown RBP12.56□□□□□ -0.4
NEK3-203ENST00000551355 MFAP1P55081 439 aaKnown RBP12.56□□□□□ -0.4
NEK3-203ENST00000551355 OLFM4Q6UX06 510 aa12.56□□□□□ -0.4
NEK3-203ENST00000551355 FHDC1Q9C0D6 1143 aaPredicted RBP12.56□□□□□ -0.4
NEK3-203ENST00000551355 HELLSQ9NRZ9 838 aa12.56□□□□□ -0.4
NEK3-203ENST00000551355 ZNF219Q9P2Y4 722 aaPredicted RBP12.56□□□□□ -0.4
NEK3-203ENST00000551355 SUGT1Q9Y2Z0 365 aa12.56□□□□□ -0.4
NEK3-203ENST00000551355 TAF1P21675 1872 aa12.56□□□□□ -0.4
NEK3-203ENST00000551355 UBE3CQ15386 1083 aa12.55□□□□□ -0.4
NEK3-203ENST00000551355 ESYT1Q9BSJ8 1104 aa12.55□□□□□ -0.4
NEK3-203ENST00000551355 LRP2BPQ9P2M1 347 aa12.55□□□□□ -0.4
NEK3-203ENST00000551355 BCS1LQ9Y276 419 aa12.55□□□□□ -0.4
NEK3-203ENST00000551355 FAM205AQ6ZU69 1335 aa12.55□□□□□ -0.4
NEK3-203ENST00000551355 LTBP3Q9NS15 1303 aa12.55□□□□□ -0.4
NEK3-203ENST00000551355 LTBP1Q14766 1721 aa12.54□□□□□ -0.4
NEK3-203ENST00000551355 A0A1B0GUL6 1792 aa12.54□□□□□ -0.4
NEK3-203ENST00000551355 RIMBP2O15034 1052 aa12.54□□□□□ -0.4
NEK3-203ENST00000551355 PPIP5K2O43314 1243 aa12.54□□□□□ -0.4
NEK3-203ENST00000551355 IDH1O75874 414 aaKnown RBP12.54□□□□□ -0.4
NEK3-203ENST00000551355 PI16Q6UXB8 463 aa12.54□□□□□ -0.4
NEK3-203ENST00000551355 KIAA1211Q6ZU35 1233 aa12.54□□□□□ -0.4
NEK3-203ENST00000551355 ERICH6Q7L0X2 663 aa12.54□□□□□ -0.4
NEK3-203ENST00000551355 NLGN2Q8NFZ4 835 aa12.54□□□□□ -0.4
NEK3-203ENST00000551355 EDC3Q96F86 508 aaKnown RBP12.54□□□□□ -0.4
NEK3-203ENST00000551355 SYT17Q9BSW7 474 aa12.54□□□□□ -0.4
NEK3-203ENST00000551355 TAOK3Q9H2K8 898 aa12.54□□□□□ -0.4
NEK3-203ENST00000551355 ANTXR1Q9H6X2 564 aa12.54□□□□□ -0.4
NEK3-203ENST00000551355 NDUFB9Q9Y6M9 179 aa12.54□□□□□ -0.4
NEK3-203ENST00000551355 SLX4Q8IY92 1834 aa12.53□□□□□ -0.4
NEK3-203ENST00000551355 DUOX1Q9NRD9 1551 aa12.53□□□□□ -0.4
NEK3-203ENST00000551355 SGSM2O43147 1006 aa12.53□□□□□ -0.4
NEK3-203ENST00000551355 FKBP1AP62942 108 aaKnown RBP12.53□□□□□ -0.4
NEK3-203ENST00000551355 MCMDC2Q4G0Z9 681 aa12.53□□□□□ -0.4
NEK3-203ENST00000551355 ZMYM1Q5SVZ6 1142 aa12.53□□□□□ -0.4
NEK3-203ENST00000551355 SLC9C2Q5TAH2 1124 aa12.53□□□□□ -0.4
NEK3-203ENST00000551355 CWC27Q6UX04 472 aaKnown RBP12.53□□□□□ -0.4
NEK3-203ENST00000551355 SLC51AQ86UW1 340 aa12.53□□□□□ -0.4
NEK3-203ENST00000551355 SLF2Q8IX21 1173 aa12.53□□□□□ -0.4
NEK3-203ENST00000551355 APPBP2Q92624 585 aa12.53□□□□□ -0.4
NEK3-203ENST00000551355 GPR101Q96P66 508 aaPredicted RBP12.53□□□□□ -0.4
NEK3-203ENST00000551355 PIH1D3Q9NQM4 214 aaKnown RBP12.53□□□□□ -0.4
NEK3-203ENST00000551355 ABCF2Q9UG63 623 aa12.53□□□□□ -0.4
NEK3-203ENST00000551355 IQSEC3Q9UPP2 1182 aaPredicted RBP12.53□□□□□ -0.4
NEK3-203ENST00000551355 KIAA1551Q9HCM1 1747 aa12.52□□□□□ -0.41
NEK3-203ENST00000551355 LDHBP07195 334 aaKnown RBP12.52□□□□□ -0.41
NEK3-203ENST00000551355 ADD2P35612 726 aa12.52□□□□□ -0.41
NEK3-203ENST00000551355 GSTO1P78417 241 aa12.52□□□□□ -0.41
NEK3-203ENST00000551355 CHAF1AQ13111 956 aaPredicted RBP12.52□□□□□ -0.41
NEK3-203ENST00000551355 NMIQ13287 307 aaPredicted RBP12.52□□□□□ -0.41
NEK3-203ENST00000551355 STRIP1Q5VSL9 837 aa12.52□□□□□ -0.41
NEK3-203ENST00000551355 CERS3Q8IU89 383 aa12.52□□□□□ -0.41
NEK3-203ENST00000551355 LARGE2Q8N3Y3 721 aa12.52□□□□□ -0.41
NEK3-203ENST00000551355 RAI14Q9P0K7 980 aa12.52□□□□□ -0.41
NEK3-203ENST00000551355 ECE2O60344 883 aa12.51□□□□□ -0.41
NEK3-203ENST00000551355 LDHCP07864 332 aa12.51□□□□□ -0.41
NEK3-203ENST00000551355 PDE6AP16499 860 aa12.51□□□□□ -0.41
NEK3-203ENST00000551355 IARSP41252 1262 aaKnown RBP12.51□□□□□ -0.41
NEK3-203ENST00000551355 AOC3Q16853 763 aa12.51□□□□□ -0.41
NEK3-203ENST00000551355 DOK7Q18PE1 504 aa12.51□□□□□ -0.41
NEK3-203ENST00000551355 TTLL5Q6EMB2 1281 aa12.51□□□□□ -0.41
NEK3-203ENST00000551355 NIM1KQ8IY84 436 aa12.51□□□□□ -0.41
NEK3-203ENST00000551355 JDP2Q8WYK2 163 aa12.51□□□□□ -0.41
NEK3-203ENST00000551355 MAST3O60307 1309 aa12.51□□□□□ -0.41
NEK3-203ENST00000551355 USP17L3A6NCW0 530 aa12.5□□□□□ -0.41
NEK3-203ENST00000551355 USP17L4A6NCW7 530 aa12.5□□□□□ -0.41
NEK3-203ENST00000551355 MCCP23508 829 aa12.5□□□□□ -0.41
NEK3-203ENST00000551355 MMP14P50281 582 aa12.5□□□□□ -0.41
NEK3-203ENST00000551355 GTF2IP78347 998 aa12.5□□□□□ -0.41
NEK3-203ENST00000551355 MFSD14BQ5SR56 506 aa12.5□□□□□ -0.41
NEK3-203ENST00000551355 NAA16Q6N069 864 aaPredicted RBP12.5□□□□□ -0.41
NEK3-203ENST00000551355 USP17L1Q7RTZ2 530 aa12.5□□□□□ -0.41
NEK3-203ENST00000551355 DZIP1Q86YF9 867 aaKnown RBP12.5□□□□□ -0.41
NEK3-203ENST00000551355 MAGEB6Q8N7X4 407 aa12.5□□□□□ -0.41
NEK3-203ENST00000551355 FAM227BQ96M60 508 aa12.5□□□□□ -0.41
NEK3-203ENST00000551355 DBNDD1Q9H9R9 158 aa12.5□□□□□ -0.41
NEK3-203ENST00000551355 ZNF277Q9NRM2 450 aaPredicted RBP12.5□□□□□ -0.41
NEK3-203ENST00000551355 ZNRF3Q9ULT6 936 aa12.5□□□□□ -0.41
NEK3-203ENST00000551355 MYO3BQ8WXR4 1341 aa12.5□□□□□ -0.41
NEK3-203ENST00000551355 COL1A1P02452 1464 aaPredicted RBP12.5□□□□□ -0.41
NEK3-203ENST00000551355 CCDC171Q6TFL3 1326 aa12.49□□□□□ -0.41
NEK3-203ENST00000551355 ZNF532Q9HCE3 1301 aa12.49□□□□□ -0.41
NEK3-203ENST00000551355 A0A0D9SFI3 127 aa12.49□□□□□ -0.41
NEK3-203ENST00000551355 TCRBV5S4A2TA0A5A2 114 aa12.49□□□□□ -0.41
NEK3-203ENST00000551355 GNAT2P19087 354 aa12.49□□□□□ -0.41
NEK3-203ENST00000551355 IL27Q8NEV9 243 aa12.49□□□□□ -0.41
NEK3-203ENST00000551355 NSUN4Q96CB9 384 aaKnown RBP12.49□□□□□ -0.41
NEK3-203ENST00000551355 MRIQ9BWK5 157 aa12.49□□□□□ -0.41
NEK3-203ENST00000551355 ANO2Q9NQ90 1003 aa12.49□□□□□ -0.41
NEK3-203ENST00000551355 WWC3Q9ULE0 1092 aa12.49□□□□□ -0.41
NEK3-203ENST00000551355 RPAP1Q9BWH6 1393 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms