RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 ZNF211Q13398 564 aaPredicted RBP7.98□□□□□ -1.13
SCAF11-214ENST00000550893 SF3B2Q13435 895 aaKnown RBP7.98□□□□□ -1.13
SCAF11-214ENST00000550893 PDE12Q6L8Q7 609 aaKnown RBP7.98□□□□□ -1.13
SCAF11-214ENST00000550893 TMEM63CQ9P1W3 806 aa7.98□□□□□ -1.13
SCAF11-214ENST00000550893 RIMS1Q86UR5 1692 aaKnown RBP7.98□□□□□ -1.13
SCAF11-214ENST00000550893 ZFYVE16Q7Z3T8 1539 aa7.98□□□□□ -1.13
SCAF11-214ENST00000550893 FER1L4A9Z1Z3 1794 aa7.97□□□□□ -1.13
SCAF11-214ENST00000550893 A6NHS1 94 aa7.97□□□□□ -1.13
SCAF11-214ENST00000550893 FAM13AO94988 1023 aa7.97□□□□□ -1.13
SCAF11-214ENST00000550893 APBA3O96018 575 aa7.97□□□□□ -1.13
SCAF11-214ENST00000550893 CYP2E1P05181 493 aaPredicted RBP7.97□□□□□ -1.13
SCAF11-214ENST00000550893 RPLP1P05386 114 aaKnown RBP7.97□□□□□ -1.13
SCAF11-214ENST00000550893 AAMPQ13685 434 aa7.97□□□□□ -1.13
SCAF11-214ENST00000550893 B4GALNT3Q6L9W6 998 aa7.97□□□□□ -1.13
SCAF11-214ENST00000550893 ALKBH2Q6NS38 261 aa7.97□□□□□ -1.13
SCAF11-214ENST00000550893 ZNF438Q7Z4V0 828 aa7.97□□□□□ -1.13
SCAF11-214ENST00000550893 POLIQ9UNA4 740 aa7.97□□□□□ -1.13
SCAF11-214ENST00000550893 ADGBQ8N7X0 1667 aa7.97□□□□□ -1.13
SCAF11-214ENST00000550893 EHBP1L1Q8N3D4 1523 aa7.97□□□□□ -1.13
SCAF11-214ENST00000550893 PLXNC1O60486 1568 aa7.97□□□□□ -1.13
SCAF11-214ENST00000550893 DENND4BO75064 1496 aaPredicted RBP7.96□□□□□ -1.13
SCAF11-214ENST00000550893 PCSK2P16519 638 aa7.96□□□□□ -1.14
SCAF11-214ENST00000550893 BAG6P46379 1132 aa7.96□□□□□ -1.14
SCAF11-214ENST00000550893 RAC1P63000 192 aa7.96□□□□□ -1.14
SCAF11-214ENST00000550893 HYAL2Q12891 473 aa7.96□□□□□ -1.14
SCAF11-214ENST00000550893 C8orf34Q49A92 452 aa7.96□□□□□ -1.14
SCAF11-214ENST00000550893 XKR5Q6UX68 686 aa7.96□□□□□ -1.14
SCAF11-214ENST00000550893 WFDC8Q8IUA0 241 aa7.96□□□□□ -1.14
SCAF11-214ENST00000550893 RBSNQ9H1K0 784 aa7.96□□□□□ -1.14
SCAF11-214ENST00000550893 CNTN3Q9P232 1028 aa7.96□□□□□ -1.14
SCAF11-214ENST00000550893 SYCP2Q9BX26 1530 aa7.96□□□□□ -1.14
SCAF11-214ENST00000550893 GPATCH8Q9UKJ3 1502 aaKnown RBP7.96□□□□□ -1.14
SCAF11-214ENST00000550893 RAPGEF3O95398 923 aa7.95□□□□□ -1.14
SCAF11-214ENST00000550893 ELNP15502 786 aa7.95□□□□□ -1.14
SCAF11-214ENST00000550893 SERPINB4P48594 390 aa7.95□□□□□ -1.14
SCAF11-214ENST00000550893 GDF6Q6KF10 455 aaPredicted RBP7.95□□□□□ -1.14
SCAF11-214ENST00000550893 FMR1NBQ8N0W7 255 aaPredicted RBP7.95□□□□□ -1.14
SCAF11-214ENST00000550893 PHLDB1Q86UU1 1377 aa7.95□□□□□ -1.14
SCAF11-214ENST00000550893 TRAPPC8Q9Y2L5 1435 aa7.95□□□□□ -1.14
SCAF11-214ENST00000550893 ARHGAP5Q13017 1502 aa7.94□□□□□ -1.14
SCAF11-214ENST00000550893 FZD6O60353 706 aa7.94□□□□□ -1.14
SCAF11-214ENST00000550893 KIF4AO95239 1232 aa7.94□□□□□ -1.14
SCAF11-214ENST00000550893 SELPP16109 830 aa7.94□□□□□ -1.14
SCAF11-214ENST00000550893 ATP11AP98196 1134 aa7.94□□□□□ -1.14
SCAF11-214ENST00000550893 SHISA2Q6UWI4 295 aa7.94□□□□□ -1.14
SCAF11-214ENST00000550893 C1orf127Q8N9H9 656 aa7.94□□□□□ -1.14
SCAF11-214ENST00000550893 TTC16Q8NEE8 873 aa7.94□□□□□ -1.14
SCAF11-214ENST00000550893 NACC1Q96RE7 527 aa7.94□□□□□ -1.14
SCAF11-214ENST00000550893 CCDC87Q9NVE4 849 aa7.94□□□□□ -1.14
SCAF11-214ENST00000550893 EGFL7Q9UHF1 273 aa7.94□□□□□ -1.14
SCAF11-214ENST00000550893 TRIM33Q9UPN9 1127 aa7.94□□□□□ -1.14
SCAF11-214ENST00000550893 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.94□□□□□ -1.14
SCAF11-214ENST00000550893 ICMTO60725 284 aa7.93□□□□□ -1.14
SCAF11-214ENST00000550893 GATA4P43694 442 aa7.93□□□□□ -1.14
SCAF11-214ENST00000550893 DTWD1Q8N5C7 304 aa7.93□□□□□ -1.14
SCAF11-214ENST00000550893 IL22RA1Q8N6P7 574 aa7.93□□□□□ -1.14
SCAF11-214ENST00000550893 SPACA7Q96KW9 195 aa7.93□□□□□ -1.14
SCAF11-214ENST00000550893 KANSL3Q9P2N6 904 aa7.93□□□□□ -1.14
SCAF11-214ENST00000550893 PDE4CQ08493 712 aa7.92□□□□□ -1.14
SCAF11-214ENST00000550893 ECM1Q16610 540 aa7.92□□□□□ -1.14
SCAF11-214ENST00000550893 FBXO11Q86XK2 927 aa7.92□□□□□ -1.14
SCAF11-214ENST00000550893 CEP120Q8N960 986 aa7.92□□□□□ -1.14
SCAF11-214ENST00000550893 RASSF4Q9H2L5 321 aa7.92□□□□□ -1.14
SCAF11-214ENST00000550893 SCAPERQ9BY12 1400 aa7.92□□□□□ -1.14
SCAF11-214ENST00000550893 PTPRMP28827 1452 aa7.92□□□□□ -1.14
SCAF11-214ENST00000550893 MAGI2Q86UL8 1455 aa7.92□□□□□ -1.14
SCAF11-214ENST00000550893 MBD5Q9P267 1494 aa7.92□□□□□ -1.14
SCAF11-214ENST00000550893 CROCC2H7BZ55 1655 aa7.92□□□□□ -1.14
SCAF11-214ENST00000550893 C3P01024 1663 aa7.92□□□□□ -1.14
SCAF11-214ENST00000550893 SUPT6HQ7KZ85 1726 aaKnown RBP7.92□□□□□ -1.14
SCAF11-214ENST00000550893 C9orf172C9J069 976 aa7.91□□□□□ -1.14
SCAF11-214ENST00000550893 H3BRB1 525 aa7.91□□□□□ -1.14
SCAF11-214ENST00000550893 DEAF1O75398 565 aaPredicted RBP7.91□□□□□ -1.14
SCAF11-214ENST00000550893 CES1P23141 567 aa7.91□□□□□ -1.14
SCAF11-214ENST00000550893 DOC2BQ14184 412 aa7.91□□□□□ -1.14
SCAF11-214ENST00000550893 CEP135Q66GS9 1140 aa7.91□□□□□ -1.14
SCAF11-214ENST00000550893 TXNDC2Q86VQ3 553 aa7.91□□□□□ -1.14
SCAF11-214ENST00000550893 NCAPG2Q86XI2 1143 aa7.91□□□□□ -1.14
SCAF11-214ENST00000550893 LENG1Q96BZ8 264 aaPredicted RBP7.91□□□□□ -1.14
SCAF11-214ENST00000550893 TUT1Q9H6E5 874 aaKnown RBP7.91□□□□□ -1.14
SCAF11-214ENST00000550893 SALL4Q9UJQ4 1053 aa7.91□□□□□ -1.14
SCAF11-214ENST00000550893 VPS8Q8N3P4 1428 aa7.91□□□□□ -1.14
SCAF11-214ENST00000550893 ZNF518AQ6AHZ1 1483 aa7.91□□□□□ -1.14
SCAF11-214ENST00000550893 MLH3Q9UHC1 1453 aa7.91□□□□□ -1.14
SCAF11-214ENST00000550893 AGLP35573 1532 aa7.9□□□□□ -1.14
SCAF11-214ENST00000550893 MAP3K1Q13233 1512 aa7.9□□□□□ -1.14
SCAF11-214ENST00000550893 LMTK3Q96Q04 1460 aa7.9□□□□□ -1.14
SCAF11-214ENST00000550893 SMNDC1O75940 238 aaKnown RBP eCLIP7.9□□□□□ -1.14
SCAF11-214ENST00000550893 FURINP09958 794 aa7.9□□□□□ -1.14
SCAF11-214ENST00000550893 USP5P45974 858 aa7.9□□□□□ -1.14
SCAF11-214ENST00000550893 ADAMTSL4Q6UY14 1074 aa7.9□□□□□ -1.14
SCAF11-214ENST00000550893 CHRDQ9H2X0 955 aa7.9□□□□□ -1.14
SCAF11-214ENST00000550893 ATP7AQ04656 1500 aa7.89□□□□□ -1.15
SCAF11-214ENST00000550893 NCOA2Q15596 1464 aa7.89□□□□□ -1.15
SCAF11-214ENST00000550893 LOC105371045A0A1W2PR82 267 aa7.89□□□□□ -1.15
SCAF11-214ENST00000550893 PLEKHD1A6NEE1 506 aa7.89□□□□□ -1.15
SCAF11-214ENST00000550893 TNFRSF21O75509 655 aa7.89□□□□□ -1.15
SCAF11-214ENST00000550893 ACPPP15309 386 aa7.89□□□□□ -1.15
SCAF11-214ENST00000550893 ADGRE1Q14246 886 aa7.89□□□□□ -1.15
SCAF11-214ENST00000550893 MBTPS1Q14703 1052 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms