RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 ELP1O95163 1332 aa16.71■□□□□ 0.27
CALCOCO1-218ENST00000550804 KDM4AO75164 1064 aa16.71■□□□□ 0.27
CALCOCO1-218ENST00000550804 ATP2B3Q16720 1220 aa16.71■□□□□ 0.27
CALCOCO1-218ENST00000550804 AGXT2Q9BYV1 514 aa16.71■□□□□ 0.27
CALCOCO1-218ENST00000550804 CNNM1Q9NRU3 951 aa16.71■□□□□ 0.27
CALCOCO1-218ENST00000550804 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.71■□□□□ 0.27
CALCOCO1-218ENST00000550804 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.71■□□□□ 0.27
CALCOCO1-218ENST00000550804 OFD1O75665 1012 aa16.71■□□□□ 0.27
CALCOCO1-218ENST00000550804 ADD1P35611 737 aaKnown RBP16.71■□□□□ 0.27
CALCOCO1-218ENST00000550804 UVSSAQ2YD98 709 aa16.71■□□□□ 0.27
CALCOCO1-218ENST00000550804 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.71■□□□□ 0.27
CALCOCO1-218ENST00000550804 SMARCC1Q92922 1105 aaPredicted RBP16.71■□□□□ 0.27
CALCOCO1-218ENST00000550804 ZNF500O60304 480 aaPredicted RBP16.7■□□□□ 0.26
CALCOCO1-218ENST00000550804 CTSWP56202 376 aa16.7■□□□□ 0.26
CALCOCO1-218ENST00000550804 OTUD7BQ6GQQ9 843 aa16.7■□□□□ 0.26
CALCOCO1-218ENST00000550804 PTF1AQ7RTS3 328 aa16.7■□□□□ 0.26
CALCOCO1-218ENST00000550804 TTC12Q9H892 705 aaPredicted RBP16.7■□□□□ 0.26
CALCOCO1-218ENST00000550804 PDIA4P13667 645 aaKnown RBP16.7■□□□□ 0.26
CALCOCO1-218ENST00000550804 NUP62CLQ9H1M0 184 aa16.7■□□□□ 0.26
CALCOCO1-218ENST00000550804 UBN2Q6ZU65 1347 aa16.69■□□□□ 0.26
CALCOCO1-218ENST00000550804 FDPSP14324 419 aaKnown RBP16.69■□□□□ 0.26
CALCOCO1-218ENST00000550804 GJB4Q9NTQ9 266 aa16.69■□□□□ 0.26
CALCOCO1-218ENST00000550804 GPAA1O43292 621 aa16.68■□□□□ 0.26
CALCOCO1-218ENST00000550804 MAP3K11Q16584 847 aa16.68■□□□□ 0.26
CALCOCO1-218ENST00000550804 SLC9C2Q5TAH2 1124 aa16.68■□□□□ 0.26
CALCOCO1-218ENST00000550804 ZNF34Q8IZ26 560 aa16.68■□□□□ 0.26
CALCOCO1-218ENST00000550804 C17orf53Q8N3J3 647 aaPredicted RBP16.68■□□□□ 0.26
CALCOCO1-218ENST00000550804 BICD2Q8TD16 824 aa16.68■□□□□ 0.26
CALCOCO1-218ENST00000550804 MRVI1Q9Y6F6 885 aa16.68■□□□□ 0.26
CALCOCO1-218ENST00000550804 CDHR2Q9BYE9 1310 aa16.68■□□□□ 0.26
CALCOCO1-218ENST00000550804 ANKRD18BA2A2Z9 1011 aa16.68■□□□□ 0.26
CALCOCO1-218ENST00000550804 CCDC192P0DO97 292 aa16.68■□□□□ 0.26
CALCOCO1-218ENST00000550804 PHKA1P46020 1223 aa16.68■□□□□ 0.26
CALCOCO1-218ENST00000550804 LUZP1Q86V48 1076 aa16.68■□□□□ 0.26
CALCOCO1-218ENST00000550804 VGLL2Q8N8G2 317 aa16.68■□□□□ 0.26
CALCOCO1-218ENST00000550804 LLPHQ9BRT6 129 aaKnown RBP16.68■□□□□ 0.26
CALCOCO1-218ENST00000550804 TNMDQ9H2S6 317 aa16.68■□□□□ 0.26
CALCOCO1-218ENST00000550804 PIH1D3Q9NQM4 214 aaKnown RBP16.68■□□□□ 0.26
CALCOCO1-218ENST00000550804 FBXO3Q9UK99 471 aa16.68■□□□□ 0.26
CALCOCO1-218ENST00000550804 NUP98P52948 1817 aa16.68■□□□□ 0.26
CALCOCO1-218ENST00000550804 MYH14Q7Z406 1995 aaKnown RBP16.68■□□□□ 0.26
CALCOCO1-218ENST00000550804 MEX3CQ5U5Q3 659 aaKnown RBP16.67■□□□□ 0.26
CALCOCO1-218ENST00000550804 ILDR1Q86SU0 546 aaPredicted RBP16.67■□□□□ 0.26
CALCOCO1-218ENST00000550804 APPBP2Q92624 585 aa16.67■□□□□ 0.26
CALCOCO1-218ENST00000550804 INCENPQ9NQS7 918 aa16.67■□□□□ 0.26
CALCOCO1-218ENST00000550804 R3HCC1Q9Y3T6 440 aaKnown RBP16.67■□□□□ 0.26
CALCOCO1-218ENST00000550804 IDH1O75874 414 aaKnown RBP16.67■□□□□ 0.26
CALCOCO1-218ENST00000550804 PDE8BO95263 885 aa16.67■□□□□ 0.26
CALCOCO1-218ENST00000550804 ANTXR2P58335 489 aa16.67■□□□□ 0.26
CALCOCO1-218ENST00000550804 TYRO3Q06418 890 aa16.67■□□□□ 0.26
CALCOCO1-218ENST00000550804 IMMTQ16891 758 aaKnown RBP16.67■□□□□ 0.26
CALCOCO1-218ENST00000550804 GJD4Q96KN9 370 aaPredicted RBP16.67■□□□□ 0.26
CALCOCO1-218ENST00000550804 TAOK2Q9UL54 1235 aa16.67■□□□□ 0.26
CALCOCO1-218ENST00000550804 RIC1Q4ADV7 1423 aa16.66■□□□□ 0.26
CALCOCO1-218ENST00000550804 FAM182BQ5T319 152 aa16.66■□□□□ 0.26
CALCOCO1-218ENST00000550804 ZNF274Q96GC6 653 aaPredicted RBP16.66■□□□□ 0.26
CALCOCO1-218ENST00000550804 USP28Q96RU2 1077 aa16.66■□□□□ 0.26
CALCOCO1-218ENST00000550804 ZSCAN16Q9H4T2 348 aaPredicted RBP16.66■□□□□ 0.26
CALCOCO1-218ENST00000550804 PRC1O43663 620 aa16.66■□□□□ 0.26
CALCOCO1-218ENST00000550804 CCDC102BQ68D86 513 aa16.66■□□□□ 0.26
CALCOCO1-218ENST00000550804 NBPF3Q9H094 633 aa16.66■□□□□ 0.26
CALCOCO1-218ENST00000550804 SALL1Q9NSC2 1324 aa16.65■□□□□ 0.26
CALCOCO1-218ENST00000550804 CICQ96RK0 1608 aaPredicted RBP16.65■□□□□ 0.26
CALCOCO1-218ENST00000550804 A0A087WWV3 80 aa16.65■□□□□ 0.26
CALCOCO1-218ENST00000550804 CAMTA2O94983 1202 aa16.65■□□□□ 0.26
CALCOCO1-218ENST00000550804 ZFYP08048 801 aaPredicted RBP16.65■□□□□ 0.26
CALCOCO1-218ENST00000550804 KCNQ4P56696 695 aa16.65■□□□□ 0.26
CALCOCO1-218ENST00000550804 SUSD4Q5VX71 490 aa16.65■□□□□ 0.26
CALCOCO1-218ENST00000550804 SPC24Q8NBT2 197 aa16.65■□□□□ 0.26
CALCOCO1-218ENST00000550804 SEC31BQ9NQW1 1179 aa16.65■□□□□ 0.26
CALCOCO1-218ENST00000550804 CTNNA3Q9UI47 895 aa16.65■□□□□ 0.26
CALCOCO1-218ENST00000550804 AFF2P51816 1311 aa16.65■□□□□ 0.26
CALCOCO1-218ENST00000550804 ANKRD36CQ5JPF3 1778 aa16.65■□□□□ 0.26
CALCOCO1-218ENST00000550804 RREB1Q92766 1687 aa16.65■□□□□ 0.26
CALCOCO1-218ENST00000550804 ZNF213O14771 459 aa16.65■□□□□ 0.26
CALCOCO1-218ENST00000550804 APPP05067 770 aa16.65■□□□□ 0.26
CALCOCO1-218ENST00000550804 ANO6Q4KMQ2 910 aa16.65■□□□□ 0.26
CALCOCO1-218ENST00000550804 LINC00116Q8NCU8 138 aa16.65■□□□□ 0.26
CALCOCO1-218ENST00000550804 WWC3Q9ULE0 1092 aa16.65■□□□□ 0.26
CALCOCO1-218ENST00000550804 HPS5Q9UPZ3 1129 aa16.65■□□□□ 0.26
CALCOCO1-218ENST00000550804 THSD7AQ9UPZ6 1657 aa16.64■□□□□ 0.25
CALCOCO1-218ENST00000550804 KLF18A0A0U1RQI7 1052 aa16.64■□□□□ 0.25
CALCOCO1-218ENST00000550804 PDE8AO60658 829 aa16.64■□□□□ 0.25
CALCOCO1-218ENST00000550804 NAA16Q6N069 864 aaPredicted RBP16.64■□□□□ 0.25
CALCOCO1-218ENST00000550804 MB21D2Q8IYB1 491 aaPredicted RBP16.64■□□□□ 0.25
CALCOCO1-218ENST00000550804 GOLPH3LQ9H4A5 285 aa16.64■□□□□ 0.25
CALCOCO1-218ENST00000550804 CLSTN2Q9H4D0 955 aa16.64■□□□□ 0.25
CALCOCO1-218ENST00000550804 CFAP45Q9UL16 551 aa16.64■□□□□ 0.25
CALCOCO1-218ENST00000550804 POLR3DP05423 398 aaPredicted RBP16.63■□□□□ 0.25
CALCOCO1-218ENST00000550804 MCM5P33992 734 aa16.63■□□□□ 0.25
CALCOCO1-218ENST00000550804 ADD2P35612 726 aa16.63■□□□□ 0.25
CALCOCO1-218ENST00000550804 HMGN5P82970 282 aaKnown RBP16.63■□□□□ 0.25
CALCOCO1-218ENST00000550804 TICAM2Q86XR7 235 aa16.63■□□□□ 0.25
CALCOCO1-218ENST00000550804 ERCC4Q92889 916 aaPredicted RBP16.63■□□□□ 0.25
CALCOCO1-218ENST00000550804 SENP2Q9HC62 589 aa16.63■□□□□ 0.25
CALCOCO1-218ENST00000550804 RXRAP19793 462 aa16.63■□□□□ 0.25
CALCOCO1-218ENST00000550804 LRRFIP1Q32MZ4 808 aaKnown RBP16.63■□□□□ 0.25
CALCOCO1-218ENST00000550804 CBX8Q9HC52 389 aa16.63■□□□□ 0.25
CALCOCO1-218ENST00000550804 RCOR1Q9UKL0 485 aa16.63■□□□□ 0.25
CALCOCO1-218ENST00000550804 ZNF532Q9HCE3 1301 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms