RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 TIMELESSQ9UNS1 1208 aa8.27□□□□□ -1.09
SCAF11-213ENST00000550629 UGGT1Q9NYU2 1555 aa8.27□□□□□ -1.09
SCAF11-213ENST00000550629 CEP170BQ9Y4F5 1589 aaPredicted RBP8.27□□□□□ -1.09
SCAF11-213ENST00000550629 TMEM131LA2VDJ0 1609 aa8.26□□□□□ -1.09
SCAF11-213ENST00000550629 C11orf91Q3C1V1 193 aa8.26□□□□□ -1.09
SCAF11-213ENST00000550629 PRRT3Q5FWE3 981 aa8.26□□□□□ -1.09
SCAF11-213ENST00000550629 CLP1Q92989 425 aaKnown RBP8.26□□□□□ -1.09
SCAF11-213ENST00000550629 SEMA6BQ9H3T3 888 aa8.26□□□□□ -1.09
SCAF11-213ENST00000550629 CXXC1Q9P0U4 656 aaPredicted RBP8.26□□□□□ -1.09
SCAF11-213ENST00000550629 SLAIN2Q9P270 581 aa8.26□□□□□ -1.09
SCAF11-213ENST00000550629 SETD1BQ9UPS6 1966 aaKnown RBP8.26□□□□□ -1.09
SCAF11-213ENST00000550629 RPGRIP1LQ68CZ1 1315 aa8.26□□□□□ -1.09
SCAF11-213ENST00000550629 SIN3BO75182 1162 aa8.25□□□□□ -1.09
SCAF11-213ENST00000550629 GATA4P43694 442 aa8.25□□□□□ -1.09
SCAF11-213ENST00000550629 COX20Q5RI15 118 aa8.25□□□□□ -1.09
SCAF11-213ENST00000550629 CAPN12Q6ZSI9 719 aa8.25□□□□□ -1.09
SCAF11-213ENST00000550629 KRTAP19-1Q8IUB9 90 aa8.25□□□□□ -1.09
SCAF11-213ENST00000550629 THEMISQ8N1K5 641 aaPredicted RBP8.25□□□□□ -1.09
SCAF11-213ENST00000550629 UBR1Q8IWV7 1749 aa8.24□□□□□ -1.09
SCAF11-213ENST00000550629 APBA3O96018 575 aa8.24□□□□□ -1.09
SCAF11-213ENST00000550629 GRNP28799 593 aaKnown RBP8.24□□□□□ -1.09
SCAF11-213ENST00000550629 IDH3AP50213 366 aa8.24□□□□□ -1.09
SCAF11-213ENST00000550629 MDFIQ99750 246 aa8.24□□□□□ -1.09
SCAF11-213ENST00000550629 MKNK1Q9BUB5 465 aa8.24□□□□□ -1.09
SCAF11-213ENST00000550629 KIF1BO60333 1816 aa8.24□□□□□ -1.09
SCAF11-213ENST00000550629 SLIT1O75093 1534 aa8.24□□□□□ -1.09
SCAF11-213ENST00000550629 TMEM2Q9UHN6 1383 aa8.23□□□□□ -1.09
SCAF11-213ENST00000550629 ZFYVE9O95405 1425 aa8.23□□□□□ -1.09
SCAF11-213ENST00000550629 MICAL2O94851 1124 aa8.23□□□□□ -1.09
SCAF11-213ENST00000550629 INPP5BP32019 993 aa8.23□□□□□ -1.09
SCAF11-213ENST00000550629 NEUROD1Q13562 356 aa8.23□□□□□ -1.09
SCAF11-213ENST00000550629 BHMTQ93088 406 aa8.23□□□□□ -1.09
SCAF11-213ENST00000550629 IFT43Q96FT9 208 aa8.23□□□□□ -1.09
SCAF11-213ENST00000550629 SAP130Q9H0E3 1048 aa8.23□□□□□ -1.09
SCAF11-213ENST00000550629 LMTK3Q96Q04 1460 aa8.23□□□□□ -1.09
SCAF11-213ENST00000550629 ARHGAP23Q9P227 1491 aa8.23□□□□□ -1.09
SCAF11-213ENST00000550629 ADARB2-AS1A8MUL3 147 aa8.22□□□□□ -1.09
SCAF11-213ENST00000550629 PPP1R15AO75807 674 aaPredicted RBP8.22□□□□□ -1.09
SCAF11-213ENST00000550629 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.22□□□□□ -1.09
SCAF11-213ENST00000550629 TNFRSF25Q93038 417 aa8.22□□□□□ -1.09
SCAF11-213ENST00000550629 COL26A1Q96A83 441 aa8.22□□□□□ -1.09
SCAF11-213ENST00000550629 SIN3AQ96ST3 1273 aa8.22□□□□□ -1.09
SCAF11-213ENST00000550629 GSX2Q9BZM3 304 aa8.22□□□□□ -1.09
SCAF11-213ENST00000550629 TONSLQ96HA7 1378 aa8.22□□□□□ -1.09
SCAF11-213ENST00000550629 CFAP65Q6ZU64 1925 aaKnown RBP8.21□□□□□ -1.09
SCAF11-213ENST00000550629 MYOM2P54296 1465 aa8.21□□□□□ -1.09
SCAF11-213ENST00000550629 ARSDP51689 593 aa8.21□□□□□ -1.1
SCAF11-213ENST00000550629 NAA30Q147X3 362 aaPredicted RBP8.21□□□□□ -1.1
SCAF11-213ENST00000550629 C16orf46Q6P387 395 aa8.21□□□□□ -1.1
SCAF11-213ENST00000550629 RIMS2Q9UQ26 1411 aa8.2□□□□□ -1.1
SCAF11-213ENST00000550629 NEXMIFQ5QGS0 1516 aa8.2□□□□□ -1.1
SCAF11-213ENST00000550629 M0R082 166 aa8.2□□□□□ -1.1
SCAF11-213ENST00000550629 OPLAHO14841 1288 aa8.2□□□□□ -1.1
SCAF11-213ENST00000550629 EPB42P16452 691 aa8.2□□□□□ -1.1
SCAF11-213ENST00000550629 ATP2B4P23634 1241 aa8.2□□□□□ -1.1
SCAF11-213ENST00000550629 ITGB7P26010 798 aa8.2□□□□□ -1.1
SCAF11-213ENST00000550629 CCINQ13939 588 aa8.2□□□□□ -1.1
SCAF11-213ENST00000550629 ZNF326Q5BKZ1 582 aaKnown RBP8.2□□□□□ -1.1
SCAF11-213ENST00000550629 ZMYM1Q5SVZ6 1142 aa8.2□□□□□ -1.1
SCAF11-213ENST00000550629 ERICH6Q7L0X2 663 aa8.2□□□□□ -1.1
SCAF11-213ENST00000550629 TREML1Q86YW5 311 aa8.2□□□□□ -1.1
SCAF11-213ENST00000550629 ZNF417Q8TAU3 575 aa8.2□□□□□ -1.1
SCAF11-213ENST00000550629 ZNF587Q96SQ5 575 aaPredicted RBP8.2□□□□□ -1.1
SCAF11-213ENST00000550629 EID1Q9Y6B2 187 aa8.2□□□□□ -1.1
SCAF11-213ENST00000550629 SCAF11Q99590 1463 aaKnown RBP8.19□□□□□ -1.1
SCAF11-213ENST00000550629 NRXN1Q9ULB1 1477 aa8.19□□□□□ -1.1
SCAF11-213ENST00000550629 TMEM88BA6NKF7 163 aa8.19□□□□□ -1.1
SCAF11-213ENST00000550629 PTCD1O75127 700 aaKnown RBP8.19□□□□□ -1.1
SCAF11-213ENST00000550629 ADH7P40394 386 aa8.19□□□□□ -1.1
SCAF11-213ENST00000550629 RGL3Q3MIN7 710 aa8.19□□□□□ -1.1
SCAF11-213ENST00000550629 ANKLE2Q86XL3 938 aa8.19□□□□□ -1.1
SCAF11-213ENST00000550629 USP20Q9Y2K6 914 aa8.19□□□□□ -1.1
SCAF11-213ENST00000550629 IFT172Q9UG01 1749 aa8.19□□□□□ -1.1
SCAF11-213ENST00000550629 MED14O60244 1454 aa8.19□□□□□ -1.1
SCAF11-213ENST00000550629 PPLO60437 1756 aa8.18□□□□□ -1.1
SCAF11-213ENST00000550629 FAM229AH3BQW9 127 aa8.18□□□□□ -1.1
SCAF11-213ENST00000550629 TNFRSF10BO14763 440 aa8.18□□□□□ -1.1
SCAF11-213ENST00000550629 FAM26DQ5JW98 314 aa8.18□□□□□ -1.1
SCAF11-213ENST00000550629 ETFBKMTQ8IXQ9 262 aa8.18□□□□□ -1.1
SCAF11-213ENST00000550629 DCAF11Q8TEB1 546 aa8.18□□□□□ -1.1
SCAF11-213ENST00000550629 PNMA5Q96PV4 448 aa8.18□□□□□ -1.1
SCAF11-213ENST00000550629 NACC1Q96RE7 527 aa8.18□□□□□ -1.1
SCAF11-213ENST00000550629 IGFLR1Q9H665 355 aa8.18□□□□□ -1.1
SCAF11-213ENST00000550629 EFCC1Q9HA90 598 aa8.18□□□□□ -1.1
SCAF11-213ENST00000550629 STARD13Q9Y3M8 1113 aa8.18□□□□□ -1.1
SCAF11-213ENST00000550629 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.18□□□□□ -1.1
SCAF11-213ENST00000550629 PLEKHG1Q9ULL1 1385 aa8.18□□□□□ -1.1
SCAF11-213ENST00000550629 SCO2A0A1W2PP80 73 aa8.17□□□□□ -1.1
SCAF11-213ENST00000550629 ALBP02768 609 aa8.17□□□□□ -1.1
SCAF11-213ENST00000550629 NFKB1P19838 968 aa8.17□□□□□ -1.1
SCAF11-213ENST00000550629 BRD2P25440 801 aaKnown RBP8.17□□□□□ -1.1
SCAF11-213ENST00000550629 ZEB1P37275 1124 aaPredicted RBP8.17□□□□□ -1.1
SCAF11-213ENST00000550629 TBC1D8BQ0IIM8 1120 aa8.17□□□□□ -1.1
SCAF11-213ENST00000550629 TXNDC2Q86VQ3 553 aa8.17□□□□□ -1.1
SCAF11-213ENST00000550629 UBE2OQ9C0C9 1292 aaKnown RBP8.17□□□□□ -1.1
SCAF11-213ENST00000550629 SEPT3Q9UH03 358 aa8.17□□□□□ -1.1
SCAF11-213ENST00000550629 RTCBQ9Y3I0 505 aaKnown RBP8.17□□□□□ -1.1
SCAF11-213ENST00000550629 PIK3C2GO75747 1445 aa8.17□□□□□ -1.1
SCAF11-213ENST00000550629 SETBP1Q9Y6X0 1596 aa8.17□□□□□ -1.1
SCAF11-213ENST00000550629 MYO5BQ9ULV0 1848 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms