RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 NEUROD6Q96NK8 337 aa23.88■■□□□ 1.41
DDX54-207ENST00000550016 GNL3LQ9NVN8 582 aaKnown RBP23.88■■□□□ 1.41
DDX54-207ENST00000550016 IQSEC3Q9UPP2 1182 aaPredicted RBP23.88■■□□□ 1.41
DDX54-207ENST00000550016 USP17L8P0C7I0 530 aa23.87■■□□□ 1.41
DDX54-207ENST00000550016 AAMPQ13685 434 aa23.87■■□□□ 1.41
DDX54-207ENST00000550016 LDHDQ86WU2 507 aa23.87■■□□□ 1.41
DDX54-207ENST00000550016 POTEIP0CG38 1075 aa23.86■■□□□ 1.41
DDX54-207ENST00000550016 POTEJP0CG39 1038 aa23.86■■□□□ 1.41
DDX54-207ENST00000550016 ZNF280AP59817 542 aaPredicted RBP23.86■■□□□ 1.41
DDX54-207ENST00000550016 C1QTNF8P60827 252 aa23.86■■□□□ 1.41
DDX54-207ENST00000550016 TNNI3KQ59H18 835 aa23.86■■□□□ 1.41
DDX54-207ENST00000550016 SMC1BQ8NDV3 1235 aa23.86■■□□□ 1.41
DDX54-207ENST00000550016 CLEC11AQ9Y240 323 aa23.86■■□□□ 1.41
DDX54-207ENST00000550016 PCDHB15Q9Y5E8 787 aa23.86■■□□□ 1.41
DDX54-207ENST00000550016 FPGT-TNNI3KV9GXZ4 949 aa23.86■■□□□ 1.41
DDX54-207ENST00000550016 RAB11FIP3O75154 756 aa23.85■■□□□ 1.41
DDX54-207ENST00000550016 PHKA1P46020 1223 aa23.85■■□□□ 1.41
DDX54-207ENST00000550016 MMP14P50281 582 aa23.85■■□□□ 1.41
DDX54-207ENST00000550016 FSTL1Q12841 308 aa23.85■■□□□ 1.41
DDX54-207ENST00000550016 CCDC102BQ68D86 513 aa23.85■■□□□ 1.41
DDX54-207ENST00000550016 CERS5Q8N5B7 392 aa23.85■■□□□ 1.41
DDX54-207ENST00000550016 JAG2Q9Y219 1238 aa23.85■■□□□ 1.41
DDX54-207ENST00000550016 CHAF1AQ13111 956 aaPredicted RBP23.84■■□□□ 1.41
DDX54-207ENST00000550016 GORABQ5T7V8 394 aa23.84■■□□□ 1.41
DDX54-207ENST00000550016 CHADLQ6NUI6 762 aa23.84■■□□□ 1.41
DDX54-207ENST00000550016 SAMD7Q7Z3H4 446 aa23.84■■□□□ 1.41
DDX54-207ENST00000550016 OGFOD1Q8N543 542 aa23.84■■□□□ 1.41
DDX54-207ENST00000550016 SEMA3EO15041 775 aa23.83■■□□□ 1.41
DDX54-207ENST00000550016 ZBTB22O15209 634 aa23.83■■□□□ 1.41
DDX54-207ENST00000550016 HIRAP54198 1017 aaPredicted RBP23.83■■□□□ 1.41
DDX54-207ENST00000550016 TBC1D10BQ4KMP7 808 aaPredicted RBP23.83■■□□□ 1.41
DDX54-207ENST00000550016 MFSD14BQ5SR56 506 aa23.83■■□□□ 1.41
DDX54-207ENST00000550016 KIAA0825Q8IV33 1275 aa23.83■■□□□ 1.41
DDX54-207ENST00000550016 RHPN1Q8TCX5 695 aa23.83■■□□□ 1.41
DDX54-207ENST00000550016 TRPM4Q8TD43 1214 aa23.83■■□□□ 1.41
DDX54-207ENST00000550016 TBC1D22AQ8WUA7 517 aa23.83■■□□□ 1.41
DDX54-207ENST00000550016 KIF1BPQ96EK5 621 aa23.83■■□□□ 1.41
DDX54-207ENST00000550016 RBM26Q5T8P6 1007 aaKnown RBP23.82■■□□□ 1.4
DDX54-207ENST00000550016 EXOC6Q8TAG9 804 aa23.82■■□□□ 1.4
DDX54-207ENST00000550016 HDAC9Q9UKV0 1011 aa23.82■■□□□ 1.4
DDX54-207ENST00000550016 APBB1O00213 710 aa23.81■■□□□ 1.4
DDX54-207ENST00000550016 KIF4BQ2VIQ3 1234 aa23.81■■□□□ 1.4
DDX54-207ENST00000550016 WDR66Q8TBY9 1149 aa23.81■■□□□ 1.4
DDX54-207ENST00000550016 MYOZ2Q9NPC6 264 aa23.81■■□□□ 1.4
DDX54-207ENST00000550016 DENND2AQ9ULE3 1009 aa23.81■■□□□ 1.4
DDX54-207ENST00000550016 EGFRP00533 1210 aa23.8■■□□□ 1.4
DDX54-207ENST00000550016 ZC3H15Q8WU90 426 aaKnown RBP23.8■■□□□ 1.4
DDX54-207ENST00000550016 EAF2Q96CJ1 260 aaPredicted RBP23.8■■□□□ 1.4
DDX54-207ENST00000550016 DCTPP1Q9H773 170 aa23.8■■□□□ 1.4
DDX54-207ENST00000550016 PGAP2Q9UHJ9 254 aa23.8■■□□□ 1.4
DDX54-207ENST00000550016 AKAP11Q9UKA4 1901 aa23.79■■□□□ 1.4
DDX54-207ENST00000550016 DBNDD2Q9BQY9 259 aa23.79■■□□□ 1.4
DDX54-207ENST00000550016 CCDC8Q9H0W5 538 aaPredicted RBP23.79■■□□□ 1.4
DDX54-207ENST00000550016 IL1RAPL2Q9NP60 686 aa23.79■■□□□ 1.4
DDX54-207ENST00000550016 ECM29Q5VYK3 1845 aa23.78■■□□□ 1.4
DDX54-207ENST00000550016 F8W031 263 aaPredicted RBP23.78■■□□□ 1.4
DDX54-207ENST00000550016 UQCRFS1P1P0C7P4 283 aa23.78■■□□□ 1.4
DDX54-207ENST00000550016 AACSQ86V21 672 aa23.78■■□□□ 1.4
DDX54-207ENST00000550016 CLASRPQ8N2M8 674 aaKnown RBP23.78■■□□□ 1.4
DDX54-207ENST00000550016 COL1A1P02452 1464 aaPredicted RBP23.78■■□□□ 1.4
DDX54-207ENST00000550016 ARID4AP29374 1257 aaPredicted RBP23.77■■□□□ 1.4
DDX54-207ENST00000550016 RASGRF1Q13972 1273 aa23.77■■□□□ 1.4
DDX54-207ENST00000550016 CCDC158Q5M9N0 1113 aa23.77■■□□□ 1.4
DDX54-207ENST00000550016 MAP1SQ66K74 1059 aaPredicted RBP23.77■■□□□ 1.4
DDX54-207ENST00000550016 CNTROBQ8N137 903 aa23.77■■□□□ 1.4
DDX54-207ENST00000550016 DBNLQ9UJU6 430 aaKnown RBP23.77■■□□□ 1.4
DDX54-207ENST00000550016 SUGT1Q9Y2Z0 365 aa23.77■■□□□ 1.4
DDX54-207ENST00000550016 PDS5AQ29RF7 1337 aaKnown RBP23.77■■□□□ 1.4
DDX54-207ENST00000550016 LRRCC1Q9C099 1032 aa23.76■■□□□ 1.39
DDX54-207ENST00000550016 TTF2Q9UNY4 1162 aaKnown RBP23.76■■□□□ 1.39
DDX54-207ENST00000550016 TRPM7Q96QT4 1865 aa23.75■■□□□ 1.39
DDX54-207ENST00000550016 IRX6P78412 446 aaPredicted RBP23.75■■□□□ 1.39
DDX54-207ENST00000550016 SCARF1Q14162 830 aa23.75■■□□□ 1.39
DDX54-207ENST00000550016 GRIK5Q16478 980 aa23.75■■□□□ 1.39
DDX54-207ENST00000550016 TTC39AQ5SRH9 613 aa23.75■■□□□ 1.39
DDX54-207ENST00000550016 MTMR14Q8NCE2 650 aa23.75■■□□□ 1.39
DDX54-207ENST00000550016 TLR7Q9NYK1 1049 aaKnown RBP23.75■■□□□ 1.39
DDX54-207ENST00000550016 SALL1Q9NSC2 1324 aa23.75■■□□□ 1.39
DDX54-207ENST00000550016 ITGBL1O95965 494 aaPredicted RBP23.74■■□□□ 1.39
DDX54-207ENST00000550016 HDAC1Q13547 482 aaPredicted RBP23.74■■□□□ 1.39
DDX54-207ENST00000550016 DLGAP5Q15398 846 aa23.74■■□□□ 1.39
DDX54-207ENST00000550016 SPATA5Q8NB90 893 aa23.74■■□□□ 1.39
DDX54-207ENST00000550016 ZNF512BQ96KM6 892 aaPredicted RBP23.74■■□□□ 1.39
DDX54-207ENST00000550016 HMG20BQ9P0W2 317 aa23.74■■□□□ 1.39
DDX54-207ENST00000550016 MYH2Q9UKX2 1941 aa23.74■■□□□ 1.39
DDX54-207ENST00000550016 WNT10BO00744 389 aa23.73■■□□□ 1.39
DDX54-207ENST00000550016 IFIT2P09913 472 aaKnown RBP23.73■■□□□ 1.39
DDX54-207ENST00000550016 ZGPATQ8N5A5 531 aaKnown RBP23.73■■□□□ 1.39
DDX54-207ENST00000550016 ZBED3Q96IU2 234 aaPredicted RBP23.73■■□□□ 1.39
DDX54-207ENST00000550016 SERPINA10Q9UK55 444 aa23.73■■□□□ 1.39
DDX54-207ENST00000550016 MYO5AQ9Y4I1 1855 aaKnown RBP23.73■■□□□ 1.39
DDX54-207ENST00000550016 MCAMP43121 646 aa23.72■■□□□ 1.39
DDX54-207ENST00000550016 HDLBPQ00341 1268 aaKnown RBP23.72■■□□□ 1.39
DDX54-207ENST00000550016 NBPF9Q3BBW0 867 aa23.72■■□□□ 1.39
DDX54-207ENST00000550016 CFAP100Q494V2 611 aa23.72■■□□□ 1.39
DDX54-207ENST00000550016 DCPSQ96C86 337 aaKnown RBP23.72■■□□□ 1.39
DDX54-207ENST00000550016 MRIQ9BWK5 157 aa23.72■■□□□ 1.39
DDX54-207ENST00000550016 MAST3O60307 1309 aa23.72■■□□□ 1.39
DDX54-207ENST00000550016 ASTN2O75129 1339 aaPredicted RBP23.71■■□□□ 1.39
DDX54-207ENST00000550016 LDHBP07195 334 aaKnown RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms