RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 RGMBQ6NW40 437 aa20.08■□□□□ 0.81
COX6A1-203ENST00000550009 NOB1Q9ULX3 412 aaKnown RBP20.08■□□□□ 0.81
COX6A1-203ENST00000550009 IQSEC3Q9UPP2 1182 aaPredicted RBP20.08■□□□□ 0.81
COX6A1-203ENST00000550009 MAP2K2P36507 400 aa20.07■□□□□ 0.8
COX6A1-203ENST00000550009 GRIK5Q16478 980 aa20.07■□□□□ 0.8
COX6A1-203ENST00000550009 MIER1Q8N108 512 aa20.07■□□□□ 0.8
COX6A1-203ENST00000550009 PITPNM2Q9BZ72 1349 aa20.06■□□□□ 0.8
COX6A1-203ENST00000550009 UBE2Q2LH0YL09 131 aa20.06■□□□□ 0.8
COX6A1-203ENST00000550009 ZNF157P51786 506 aaPredicted RBP20.06■□□□□ 0.8
COX6A1-203ENST00000550009 ALDH1L2Q3SY69 923 aa20.06■□□□□ 0.8
COX6A1-203ENST00000550009 FAM84BQ96KN1 310 aaPredicted RBP20.06■□□□□ 0.8
COX6A1-203ENST00000550009 MYO3BQ8WXR4 1341 aa20.05■□□□□ 0.8
COX6A1-203ENST00000550009 RFX5P48382 616 aaPredicted RBP20.05■□□□□ 0.8
COX6A1-203ENST00000550009 ZNF804AQ7Z570 1209 aa20.05■□□□□ 0.8
COX6A1-203ENST00000550009 OGFOD1Q8N543 542 aa20.05■□□□□ 0.8
COX6A1-203ENST00000550009 VGLL2Q8N8G2 317 aa20.05■□□□□ 0.8
COX6A1-203ENST00000550009 KIF23Q02241 960 aaPredicted RBP20.04■□□□□ 0.8
COX6A1-203ENST00000550009 PRKG1Q13976 671 aa20.04■□□□□ 0.8
COX6A1-203ENST00000550009 OTOFQ9HC10 1997 aa20.03■□□□□ 0.8
COX6A1-203ENST00000550009 CLRN2A0PK11 232 aa20.03■□□□□ 0.8
COX6A1-203ENST00000550009 SLC10A3P09131 477 aa20.03■□□□□ 0.8
COX6A1-203ENST00000550009 RARSP54136 660 aaKnown RBP20.03■□□□□ 0.8
COX6A1-203ENST00000550009 BRPF1P55201 1214 aaPredicted RBP20.03■□□□□ 0.8
COX6A1-203ENST00000550009 UBE4AQ14139 1066 aa20.03■□□□□ 0.8
COX6A1-203ENST00000550009 RASAL3Q86YV0 1011 aa20.03■□□□□ 0.8
COX6A1-203ENST00000550009 TDRD7Q8NHU6 1098 aaKnown RBP20.03■□□□□ 0.8
COX6A1-203ENST00000550009 PRMT6Q96LA8 375 aaPredicted RBP20.03■□□□□ 0.8
COX6A1-203ENST00000550009 SSC5DA1L4H1 1573 aa20.03■□□□□ 0.8
COX6A1-203ENST00000550009 NOGQ13253 232 aa20.02■□□□□ 0.8
COX6A1-203ENST00000550009 CFAP100Q494V2 611 aa20.02■□□□□ 0.8
COX6A1-203ENST00000550009 METTL24Q5JXM2 366 aa20.02■□□□□ 0.8
COX6A1-203ENST00000550009 HIBADHP31937 336 aaKnown RBP20.01■□□□□ 0.79
COX6A1-203ENST00000550009 MKRN3Q13064 507 aaKnown RBP20.01■□□□□ 0.79
COX6A1-203ENST00000550009 BEGAINQ9BUH8 593 aa20.01■□□□□ 0.79
COX6A1-203ENST00000550009 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.01■□□□□ 0.79
COX6A1-203ENST00000550009 HDAC9Q9UKV0 1011 aa20.01■□□□□ 0.79
COX6A1-203ENST00000550009 BCAMP50895 628 aa20■□□□□ 0.79
COX6A1-203ENST00000550009 PTPN12Q05209 780 aaKnown RBP20■□□□□ 0.79
COX6A1-203ENST00000550009 DLGAP5Q15398 846 aa20■□□□□ 0.79
COX6A1-203ENST00000550009 FBXO33Q7Z6M2 555 aa20■□□□□ 0.79
COX6A1-203ENST00000550009 CSRNP1Q96S65 589 aa20■□□□□ 0.79
COX6A1-203ENST00000550009 MEIS3Q99687 375 aa20■□□□□ 0.79
COX6A1-203ENST00000550009 FAM205AQ6ZU69 1335 aa20■□□□□ 0.79
COX6A1-203ENST00000550009 MROH5Q6ZUA9 1318 aa20■□□□□ 0.79
COX6A1-203ENST00000550009 BCAR3O75815 825 aa19.99■□□□□ 0.79
COX6A1-203ENST00000550009 CHAF1AQ13111 956 aaPredicted RBP19.99■□□□□ 0.79
COX6A1-203ENST00000550009 MFSD14BQ5SR56 506 aa19.99■□□□□ 0.79
COX6A1-203ENST00000550009 ATG9AQ7Z3C6 839 aa19.99■□□□□ 0.79
COX6A1-203ENST00000550009 CDAN1Q8IWY9 1227 aa19.99■□□□□ 0.79
COX6A1-203ENST00000550009 SIL1Q9H173 461 aa19.99■□□□□ 0.79
COX6A1-203ENST00000550009 PA2G4Q9UQ80 394 aaKnown RBP19.99■□□□□ 0.79
COX6A1-203ENST00000550009 SPDYE2BA6NHP3 402 aa19.98■□□□□ 0.79
COX6A1-203ENST00000550009 PDE8BO95263 885 aa19.98■□□□□ 0.79
COX6A1-203ENST00000550009 SPDYE6P0CI01 402 aa19.98■□□□□ 0.79
COX6A1-203ENST00000550009 TTLL12Q14166 644 aaPredicted RBP19.98■□□□□ 0.79
COX6A1-203ENST00000550009 LRRFIP2Q9Y608 721 aaKnown RBP19.98■□□□□ 0.79
COX6A1-203ENST00000550009 COL1A1P02452 1464 aaPredicted RBP19.98■□□□□ 0.79
COX6A1-203ENST00000550009 TRPA1O75762 1119 aa19.97■□□□□ 0.79
COX6A1-203ENST00000550009 FGFR2P21802 821 aa19.97■□□□□ 0.79
COX6A1-203ENST00000550009 FKBP1AP62942 108 aaKnown RBP19.97■□□□□ 0.79
COX6A1-203ENST00000550009 MTMR14Q8NCE2 650 aa19.97■□□□□ 0.79
COX6A1-203ENST00000550009 CCDC102AQ96A19 550 aa19.97■□□□□ 0.79
COX6A1-203ENST00000550009 DEFB129Q9H1M3 183 aa19.97■□□□□ 0.79
COX6A1-203ENST00000550009 RNF186Q9NXI6 227 aa19.97■□□□□ 0.79
COX6A1-203ENST00000550009 RBM5P52756 815 aaKnown RBP eCLIP19.96■□□□□ 0.79
COX6A1-203ENST00000550009 APOBEC3FQ8IUX4 373 aaKnown RBP19.96■□□□□ 0.79
COX6A1-203ENST00000550009 TDRD3Q9H7E2 651 aaKnown RBP19.96■□□□□ 0.79
COX6A1-203ENST00000550009 VEZTQ9HBM0 779 aa19.96■□□□□ 0.79
COX6A1-203ENST00000550009 TTF2Q9UNY4 1162 aaKnown RBP19.96■□□□□ 0.79
COX6A1-203ENST00000550009 UBTFL1P0CB47 393 aaPredicted RBP19.95■□□□□ 0.78
COX6A1-203ENST00000550009 NBPF12Q5TAG4 269 aaPredicted RBP19.95■□□□□ 0.78
COX6A1-203ENST00000550009 ABHD8Q96I13 439 aa19.95■□□□□ 0.78
COX6A1-203ENST00000550009 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.95■□□□□ 0.78
COX6A1-203ENST00000550009 LAMB1P07942 1786 aa19.94■□□□□ 0.78
COX6A1-203ENST00000550009 EYA2O00167 538 aa19.94■□□□□ 0.78
COX6A1-203ENST00000550009 DIEXFQ68CQ4 756 aaKnown RBP19.94■□□□□ 0.78
COX6A1-203ENST00000550009 CLMNQ96JQ2 1002 aa19.94■□□□□ 0.78
COX6A1-203ENST00000550009 ANGEL1Q9UNK9 670 aaKnown RBP19.94■□□□□ 0.78
COX6A1-203ENST00000550009 AK9Q5TCS8 1911 aa19.94■□□□□ 0.78
COX6A1-203ENST00000550009 CT47B1P0C2W7 299 aaPredicted RBP19.93■□□□□ 0.78
COX6A1-203ENST00000550009 CACNB3P54284 484 aa19.93■□□□□ 0.78
COX6A1-203ENST00000550009 FKBP1BP68106 108 aa19.93■□□□□ 0.78
COX6A1-203ENST00000550009 API5Q9BZZ5 524 aaKnown RBP19.93■□□□□ 0.78
COX6A1-203ENST00000550009 ZNF70Q9UC06 446 aaPredicted RBP19.93■□□□□ 0.78
COX6A1-203ENST00000550009 MYH2Q9UKX2 1941 aa19.93■□□□□ 0.78
COX6A1-203ENST00000550009 TRIM27P14373 513 aa19.92■□□□□ 0.78
COX6A1-203ENST00000550009 CRKP46108 304 aa19.92■□□□□ 0.78
COX6A1-203ENST00000550009 VPS37DQ86XT2 251 aa19.92■□□□□ 0.78
COX6A1-203ENST00000550009 CLUAP1Q96AJ1 413 aa19.92■□□□□ 0.78
COX6A1-203ENST00000550009 CENPFP49454 3210 aa19.91■□□□□ 0.78
COX6A1-203ENST00000550009 ADORA1P30542 326 aa19.91■□□□□ 0.78
COX6A1-203ENST00000550009 MMP14P50281 582 aa19.91■□□□□ 0.78
COX6A1-203ENST00000550009 HNRNPUQ00839 825 aaKnown RBP eCLIP19.91■□□□□ 0.78
COX6A1-203ENST00000550009 RASA3Q14644 834 aa19.91■□□□□ 0.78
COX6A1-203ENST00000550009 PUM3Q15397 648 aaKnown RBP19.91■□□□□ 0.78
COX6A1-203ENST00000550009 LDLRAD1Q5T700 205 aa19.91■□□□□ 0.78
COX6A1-203ENST00000550009 DZIP1LQ8IYY4 767 aaKnown RBP19.91■□□□□ 0.78
COX6A1-203ENST00000550009 FRAT1Q92837 279 aaPredicted RBP19.91■□□□□ 0.78
COX6A1-203ENST00000550009 MCOLN1Q9GZU1 580 aa19.91■□□□□ 0.78
COX6A1-203ENST00000550009 R3HDMLQ9H3Y0 253 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms