RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 XAGE2Q96GT9 111 aa18.41■□□□□ 0.54
GPN3-206ENST00000549963 FAM205AQ6ZU69 1335 aa18.41■□□□□ 0.54
GPN3-206ENST00000549963 SEMA3EO15041 775 aa18.4■□□□□ 0.54
GPN3-206ENST00000549963 SIRT2Q8IXJ6 389 aa18.4■□□□□ 0.54
GPN3-206ENST00000549963 KIF1BPQ96EK5 621 aa18.4■□□□□ 0.54
GPN3-206ENST00000549963 IQSEC3Q9UPP2 1182 aaPredicted RBP18.4■□□□□ 0.54
GPN3-206ENST00000549963 C1QTNF8P60827 252 aa18.39■□□□□ 0.53
GPN3-206ENST00000549963 CHAF1AQ13111 956 aaPredicted RBP18.39■□□□□ 0.53
GPN3-206ENST00000549963 TNNI3KQ59H18 835 aa18.39■□□□□ 0.53
GPN3-206ENST00000549963 CCDC158Q5M9N0 1113 aa18.39■□□□□ 0.53
GPN3-206ENST00000549963 CHADLQ6NUI6 762 aa18.39■□□□□ 0.53
GPN3-206ENST00000549963 WDR66Q8TBY9 1149 aa18.39■□□□□ 0.53
GPN3-206ENST00000549963 GMLQ99445 158 aa18.39■□□□□ 0.53
GPN3-206ENST00000549963 DENND2AQ9ULE3 1009 aa18.39■□□□□ 0.53
GPN3-206ENST00000549963 FPGT-TNNI3KV9GXZ4 949 aa18.39■□□□□ 0.53
GPN3-206ENST00000549963 ZNF609O15014 1411 aa18.39■□□□□ 0.53
GPN3-206ENST00000549963 MYH13Q9UKX3 1938 aa18.39■□□□□ 0.53
GPN3-206ENST00000549963 MFSD14BQ5SR56 506 aa18.38■□□□□ 0.53
GPN3-206ENST00000549963 RBM26Q5T8P6 1007 aaKnown RBP18.38■□□□□ 0.53
GPN3-206ENST00000549963 CCDC102BQ68D86 513 aa18.38■□□□□ 0.53
GPN3-206ENST00000549963 KIAA0825Q8IV33 1275 aa18.38■□□□□ 0.53
GPN3-206ENST00000549963 CLASRPQ8N2M8 674 aaKnown RBP18.38■□□□□ 0.53
GPN3-206ENST00000549963 RHPN1Q8TCX5 695 aa18.38■□□□□ 0.53
GPN3-206ENST00000549963 ZC3H15Q8WU90 426 aaKnown RBP18.38■□□□□ 0.53
GPN3-206ENST00000549963 APBB1O00213 710 aa18.37■□□□□ 0.53
GPN3-206ENST00000549963 UQCRFS1P1P0C7P4 283 aa18.37■□□□□ 0.53
GPN3-206ENST00000549963 ADORA1P30542 326 aa18.37■□□□□ 0.53
GPN3-206ENST00000549963 PHKA1P46020 1223 aa18.37■□□□□ 0.53
GPN3-206ENST00000549963 ZNF280AP59817 542 aaPredicted RBP18.37■□□□□ 0.53
GPN3-206ENST00000549963 TBC1D10BQ4KMP7 808 aaPredicted RBP18.37■□□□□ 0.53
GPN3-206ENST00000549963 SAMD7Q7Z3H4 446 aa18.37■□□□□ 0.53
GPN3-206ENST00000549963 MXD3Q9BW11 206 aa18.37■□□□□ 0.53
GPN3-206ENST00000549963 MYOZ2Q9NPC6 264 aa18.37■□□□□ 0.53
GPN3-206ENST00000549963 JAG2Q9Y219 1238 aa18.37■□□□□ 0.53
GPN3-206ENST00000549963 KIF4BQ2VIQ3 1234 aa18.36■□□□□ 0.53
GPN3-206ENST00000549963 ZGPATQ8N5A5 531 aaKnown RBP18.36■□□□□ 0.53
GPN3-206ENST00000549963 ZBTB47Q9UFB7 747 aaPredicted RBP18.36■□□□□ 0.53
GPN3-206ENST00000549963 SUGT1Q9Y2Z0 365 aa18.36■□□□□ 0.53
GPN3-206ENST00000549963 ARAP2Q8WZ64 1704 aa18.35■□□□□ 0.53
GPN3-206ENST00000549963 ZBTB22O15209 634 aa18.35■□□□□ 0.53
GPN3-206ENST00000549963 TTC39AQ5SRH9 613 aa18.35■□□□□ 0.53
GPN3-206ENST00000549963 LRRCC1Q9C099 1032 aa18.35■□□□□ 0.53
GPN3-206ENST00000549963 DCTPP1Q9H773 170 aa18.35■□□□□ 0.53
GPN3-206ENST00000549963 PCDHB15Q9Y5E8 787 aa18.35■□□□□ 0.53
GPN3-206ENST00000549963 SHTN1A0MZ66 631 aa18.34■□□□□ 0.53
GPN3-206ENST00000549963 F8W031 263 aaPredicted RBP18.34■□□□□ 0.53
GPN3-206ENST00000549963 IFIT2P09913 472 aaKnown RBP18.34■□□□□ 0.53
GPN3-206ENST00000549963 AACSQ86V21 672 aa18.34■□□□□ 0.53
GPN3-206ENST00000549963 CNTROBQ8N137 903 aa18.34■□□□□ 0.53
GPN3-206ENST00000549963 EXOC6Q8TAG9 804 aa18.34■□□□□ 0.53
GPN3-206ENST00000549963 DCPSQ96C86 337 aaKnown RBP18.34■□□□□ 0.53
GPN3-206ENST00000549963 CCDC8Q9H0W5 538 aaPredicted RBP18.34■□□□□ 0.53
GPN3-206ENST00000549963 IL1RAPL2Q9NP60 686 aa18.34■□□□□ 0.53
GPN3-206ENST00000549963 TTF2Q9UNY4 1162 aaKnown RBP18.34■□□□□ 0.53
GPN3-206ENST00000549963 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.34■□□□□ 0.53
GPN3-206ENST00000549963 MAST3O60307 1309 aa18.33■□□□□ 0.53
GPN3-206ENST00000549963 CENPBP07199 599 aaPredicted RBP18.33■□□□□ 0.52
GPN3-206ENST00000549963 POTEIP0CG38 1075 aa18.33■□□□□ 0.52
GPN3-206ENST00000549963 POTEJP0CG39 1038 aa18.33■□□□□ 0.52
GPN3-206ENST00000549963 RBM5P52756 815 aaKnown RBP eCLIP18.33■□□□□ 0.52
GPN3-206ENST00000549963 DLGAP5Q15398 846 aa18.33■□□□□ 0.52
GPN3-206ENST00000549963 SPTY2D1Q68D10 685 aaPredicted RBP18.33■□□□□ 0.52
GPN3-206ENST00000549963 CERS5Q8N5B7 392 aa18.33■□□□□ 0.52
GPN3-206ENST00000549963 TRPM4Q8TD43 1214 aa18.33■□□□□ 0.52
GPN3-206ENST00000549963 EAF2Q96CJ1 260 aaPredicted RBP18.33■□□□□ 0.52
GPN3-206ENST00000549963 BCL11AQ9H165 835 aa18.33■□□□□ 0.52
GPN3-206ENST00000549963 RWDD1Q9H446 243 aaPredicted RBP18.33■□□□□ 0.52
GPN3-206ENST00000549963 MYO1BO43795 1136 aa18.32■□□□□ 0.52
GPN3-206ENST00000549963 HIRAP54198 1017 aaPredicted RBP18.32■□□□□ 0.52
GPN3-206ENST00000549963 SCARF1Q14162 830 aa18.32■□□□□ 0.52
GPN3-206ENST00000549963 DBNDD2Q9BQY9 259 aa18.32■□□□□ 0.52
GPN3-206ENST00000549963 PGAP2Q9UHJ9 254 aa18.32■□□□□ 0.52
GPN3-206ENST00000549963 PDS5AQ29RF7 1337 aaKnown RBP18.31■□□□□ 0.52
GPN3-206ENST00000549963 ZNF646O15015 1829 aaPredicted RBP18.31■□□□□ 0.52
GPN3-206ENST00000549963 LDHBP07195 334 aaKnown RBP18.31■□□□□ 0.52
GPN3-206ENST00000549963 ARID4AP29374 1257 aaPredicted RBP18.31■□□□□ 0.52
GPN3-206ENST00000549963 HDLBPQ00341 1268 aaKnown RBP18.31■□□□□ 0.52
GPN3-206ENST00000549963 MAP1SQ66K74 1059 aaPredicted RBP18.31■□□□□ 0.52
GPN3-206ENST00000549963 CDC37L1Q7L3B6 337 aa18.31■□□□□ 0.52
GPN3-206ENST00000549963 SPATA5Q8NB90 893 aa18.31■□□□□ 0.52
GPN3-206ENST00000549963 ZNF512BQ96KM6 892 aaPredicted RBP18.31■□□□□ 0.52
GPN3-206ENST00000549963 MRIQ9BWK5 157 aa18.31■□□□□ 0.52
GPN3-206ENST00000549963 SERPINA10Q9UK55 444 aa18.31■□□□□ 0.52
GPN3-206ENST00000549963 SALL1Q9NSC2 1324 aa18.3■□□□□ 0.52
GPN3-206ENST00000549963 POLR2AP24928 1970 aaKnown RBP18.3■□□□□ 0.52
GPN3-206ENST00000549963 HDAC1Q13547 482 aaPredicted RBP18.3■□□□□ 0.52
GPN3-206ENST00000549963 RASGRF1Q13972 1273 aa18.3■□□□□ 0.52
GPN3-206ENST00000549963 SLF2Q8IX21 1173 aa18.3■□□□□ 0.52
GPN3-206ENST00000549963 MTMR14Q8NCE2 650 aa18.3■□□□□ 0.52
GPN3-206ENST00000549963 GCC1Q96CN9 775 aa18.3■□□□□ 0.52
GPN3-206ENST00000549963 ABCF2Q9UG63 623 aa18.3■□□□□ 0.52
GPN3-206ENST00000549963 IRX6P78412 446 aaPredicted RBP18.29■□□□□ 0.52
GPN3-206ENST00000549963 CFAP100Q494V2 611 aa18.29■□□□□ 0.52
GPN3-206ENST00000549963 SULF1Q8IWU6 871 aa18.29■□□□□ 0.52
GPN3-206ENST00000549963 TEKT1Q969V4 418 aa18.29■□□□□ 0.52
GPN3-206ENST00000549963 HMG20BQ9P0W2 317 aa18.29■□□□□ 0.52
GPN3-206ENST00000549963 DBNLQ9UJU6 430 aaKnown RBP18.29■□□□□ 0.52
GPN3-206ENST00000549963 ADAMTSL1Q8N6G6 1762 aa18.28■□□□□ 0.52
GPN3-206ENST00000549963 WNT10BO00744 389 aa18.28■□□□□ 0.52
GPN3-206ENST00000549963 EGFRP00533 1210 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms