RNA–Protein interactions for RNA: ENST00000549750.5

CNOT2-220, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-220ENST00000549750 WNT10BO00744 389 aa17.3■□□□□ 0.36
CNOT2-220ENST00000549750 SREBF2Q12772 1141 aa17.3■□□□□ 0.36
CNOT2-220ENST00000549750 CCDC57Q2TAC2 916 aa17.3■□□□□ 0.36
CNOT2-220ENST00000549750 ZBED3Q96IU2 234 aaPredicted RBP17.3■□□□□ 0.36
CNOT2-220ENST00000549750 MXD3Q9BW11 206 aa17.3■□□□□ 0.36
CNOT2-220ENST00000549750 PTPRCP08575 1304 aa17.29■□□□□ 0.36
CNOT2-220ENST00000549750 TAF5LO75529 589 aa17.29■□□□□ 0.36
CNOT2-220ENST00000549750 IL1R1P14778 569 aa17.29■□□□□ 0.36
CNOT2-220ENST00000549750 FKBP1AP62942 108 aaKnown RBP17.29■□□□□ 0.36
CNOT2-220ENST00000549750 TTLL12Q14166 644 aaPredicted RBP17.29■□□□□ 0.36
CNOT2-220ENST00000549750 NBPF9Q3BBW0 867 aa17.29■□□□□ 0.36
CNOT2-220ENST00000549750 MRPL50Q8N5N7 158 aaKnown RBP17.29■□□□□ 0.36
CNOT2-220ENST00000549750 KAZALD1Q96I82 304 aa17.29■□□□□ 0.36
CNOT2-220ENST00000549750 CHMP3Q9Y3E7 222 aa17.29■□□□□ 0.36
CNOT2-220ENST00000549750 POTEFA5A3E0 1075 aa17.28■□□□□ 0.36
CNOT2-220ENST00000549750 GTF2IP78347 998 aa17.28■□□□□ 0.36
CNOT2-220ENST00000549750 SLFN5Q08AF3 891 aa17.28■□□□□ 0.36
CNOT2-220ENST00000549750 SLC4A10Q6U841 1118 aa17.28■□□□□ 0.36
CNOT2-220ENST00000549750 LDHAL6AQ6ZMR3 332 aa17.28■□□□□ 0.36
CNOT2-220ENST00000549750 R3HDMLQ9H3Y0 253 aa17.28■□□□□ 0.36
CNOT2-220ENST00000549750 ECM29Q5VYK3 1845 aa17.28■□□□□ 0.36
CNOT2-220ENST00000549750 COL1A1P02452 1464 aaPredicted RBP17.27■□□□□ 0.36
CNOT2-220ENST00000549750 MKRN3Q13064 507 aaKnown RBP17.27■□□□□ 0.36
CNOT2-220ENST00000549750 RABL6Q3YEC7 729 aaPredicted RBP17.27■□□□□ 0.36
CNOT2-220ENST00000549750 ZNF804AQ7Z570 1209 aa17.27■□□□□ 0.36
CNOT2-220ENST00000549750 MTMR14Q8NCE2 650 aa17.27■□□□□ 0.36
CNOT2-220ENST00000549750 FBXW7Q969H0 707 aa17.27■□□□□ 0.36
CNOT2-220ENST00000549750 SUCLG2Q96I99 432 aa17.27■□□□□ 0.36
CNOT2-220ENST00000549750 CEP290O15078 2479 aa17.27■□□□□ 0.35
CNOT2-220ENST00000549750 SNAP23O00161 211 aa17.26■□□□□ 0.35
CNOT2-220ENST00000549750 ALDH1A1P00352 501 aa17.26■□□□□ 0.35
CNOT2-220ENST00000549750 NBPF7P0C2Y1 421 aaPredicted RBP17.26■□□□□ 0.35
CNOT2-220ENST00000549750 TAF7LQ5H9L4 462 aa17.26■□□□□ 0.35
CNOT2-220ENST00000549750 PRAMEF18Q5VWM3 479 aa17.26■□□□□ 0.35
CNOT2-220ENST00000549750 APOBEC3FQ8IUX4 373 aaKnown RBP17.26■□□□□ 0.35
CNOT2-220ENST00000549750 KIAA0825Q8IV33 1275 aa17.26■□□□□ 0.35
CNOT2-220ENST00000549750 CERS5Q8N5B7 392 aa17.26■□□□□ 0.35
CNOT2-220ENST00000549750 HELBQ8NG08 1087 aaPredicted RBP17.26■□□□□ 0.35
CNOT2-220ENST00000549750 ZNF594Q96JF6 807 aaPredicted RBP17.26■□□□□ 0.35
CNOT2-220ENST00000549750 CNNM1Q9NRU3 951 aa17.26■□□□□ 0.35
CNOT2-220ENST00000549750 TRIM17Q9Y577 477 aa17.26■□□□□ 0.35
CNOT2-220ENST00000549750 HTTP42858 3142 aa17.25■□□□□ 0.35
CNOT2-220ENST00000549750 SASH1O94885 1247 aa17.25■□□□□ 0.35
CNOT2-220ENST00000549750 NF2P35240 595 aa17.25■□□□□ 0.35
CNOT2-220ENST00000549750 UBE4AQ14139 1066 aa17.25■□□□□ 0.35
CNOT2-220ENST00000549750 SSH1Q8WYL5 1049 aa17.25■□□□□ 0.35
CNOT2-220ENST00000549750 SCAF8Q9UPN6 1271 aaKnown RBP17.25■□□□□ 0.35
CNOT2-220ENST00000549750 TRIOBPQ9H2D6 2365 aa17.25■□□□□ 0.35
CNOT2-220ENST00000549750 ARAP2Q8WZ64 1704 aa17.24■□□□□ 0.35
CNOT2-220ENST00000549750 CENPFP49454 3210 aa17.24■□□□□ 0.35
CNOT2-220ENST00000549750 ALDH1L2Q3SY69 923 aa17.24■□□□□ 0.35
CNOT2-220ENST00000549750 OTOP1Q7RTM1 612 aa17.24■□□□□ 0.35
CNOT2-220ENST00000549750 TRMT2AQ8IZ69 625 aaKnown RBP17.24■□□□□ 0.35
CNOT2-220ENST00000549750 FAM205AQ6ZU69 1335 aa17.23■□□□□ 0.35
CNOT2-220ENST00000549750 PTPN12Q05209 780 aaKnown RBP17.23■□□□□ 0.35
CNOT2-220ENST00000549750 COLQQ9Y215 455 aaPredicted RBP17.23■□□□□ 0.35
CNOT2-220ENST00000549750 RIPOR2Q9Y4F9 1068 aa17.23■□□□□ 0.35
CNOT2-220ENST00000549750 MROH5Q6ZUA9 1318 aa17.22■□□□□ 0.35
CNOT2-220ENST00000549750 CT47B1P0C2W7 299 aaPredicted RBP17.22■□□□□ 0.35
CNOT2-220ENST00000549750 ARMC9Q7Z3E5 817 aa17.22■□□□□ 0.35
CNOT2-220ENST00000549750 ANKRD44Q8N8A2 993 aa17.22■□□□□ 0.35
CNOT2-220ENST00000549750 TDRD7Q8NHU6 1098 aaKnown RBP17.22■□□□□ 0.35
CNOT2-220ENST00000549750 BICC1Q9H694 974 aaKnown RBP17.22■□□□□ 0.35
CNOT2-220ENST00000549750 PPP2R3BQ9Y5P8 575 aa17.22■□□□□ 0.35
CNOT2-220ENST00000549750 CCER2I3L3R5 266 aa17.21■□□□□ 0.35
CNOT2-220ENST00000549750 EN2P19622 333 aaPredicted RBP17.21■□□□□ 0.35
CNOT2-220ENST00000549750 INHBEP58166 350 aa17.21■□□□□ 0.35
CNOT2-220ENST00000549750 DLGAP5Q15398 846 aa17.21■□□□□ 0.35
CNOT2-220ENST00000549750 SPRYD7Q5W111 196 aa17.21■□□□□ 0.35
CNOT2-220ENST00000549750 PUS3Q9BZE2 481 aaKnown RBP17.21■□□□□ 0.35
CNOT2-220ENST00000549750 USP44Q9H0E7 712 aa17.21■□□□□ 0.35
CNOT2-220ENST00000549750 PTPN22Q9Y2R2 807 aa17.21■□□□□ 0.35
CNOT2-220ENST00000549750 SPDYE2BA6NHP3 402 aa17.2■□□□□ 0.34
CNOT2-220ENST00000549750 SPDYE6P0CI01 402 aa17.2■□□□□ 0.34
CNOT2-220ENST00000549750 FAM84BQ96KN1 310 aaPredicted RBP17.2■□□□□ 0.34
CNOT2-220ENST00000549750 BRCA2P51587 3418 aa17.2■□□□□ 0.34
CNOT2-220ENST00000549750 SZT2Q5T011 3432 aa17.2■□□□□ 0.34
CNOT2-220ENST00000549750 PLIN1O60240 522 aa17.19■□□□□ 0.34
CNOT2-220ENST00000549750 HIBADHP31937 336 aaKnown RBP17.19■□□□□ 0.34
CNOT2-220ENST00000549750 IFNL1Q8IU54 200 aa17.19■□□□□ 0.34
CNOT2-220ENST00000549750 VGLL2Q8N8G2 317 aa17.19■□□□□ 0.34
CNOT2-220ENST00000549750 ARMC5Q96C12 935 aa17.19■□□□□ 0.34
CNOT2-220ENST00000549750 CDCA7LQ96GN5 454 aa17.19■□□□□ 0.34
CNOT2-220ENST00000549750 ERO1AQ96HE7 468 aa17.19■□□□□ 0.34
CNOT2-220ENST00000549750 LAMB1P07942 1786 aa17.19■□□□□ 0.34
CNOT2-220ENST00000549750 MANSC4A6NHS7 340 aaPredicted RBP17.18■□□□□ 0.34
CNOT2-220ENST00000549750 MYO1BO43795 1136 aa17.18■□□□□ 0.34
CNOT2-220ENST00000549750 PRKG1Q13976 671 aa17.18■□□□□ 0.34
CNOT2-220ENST00000549750 MAP3K11Q16584 847 aa17.18■□□□□ 0.34
CNOT2-220ENST00000549750 CFAP100Q494V2 611 aa17.18■□□□□ 0.34
CNOT2-220ENST00000549750 LDLRAD1Q5T700 205 aa17.18■□□□□ 0.34
CNOT2-220ENST00000549750 TMEM106CQ9BVX2 250 aa17.18■□□□□ 0.34
CNOT2-220ENST00000549750 DEFB129Q9H1M3 183 aa17.18■□□□□ 0.34
CNOT2-220ENST00000549750 KIF16BQ96L93 1317 aa17.18■□□□□ 0.34
CNOT2-220ENST00000549750 SSC5DA1L4H1 1573 aa17.17■□□□□ 0.34
CNOT2-220ENST00000549750 UNCXA6NJT0 531 aa17.17■□□□□ 0.34
CNOT2-220ENST00000549750 PDE8BO95263 885 aa17.17■□□□□ 0.34
CNOT2-220ENST00000549750 GYG1P46976 350 aa17.17■□□□□ 0.34
CNOT2-220ENST00000549750 MFSD14BQ5SR56 506 aa17.17■□□□□ 0.34
CNOT2-220ENST00000549750 FBXO33Q7Z6M2 555 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms