RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 PBXIP1Q96AQ6 731 aa6.03□□□□□ -1.44
SCAF11-212ENST00000549162 TBC1D32Q96NH3 1257 aa6.03□□□□□ -1.44
SCAF11-212ENST00000549162 KIF2CQ99661 725 aa6.03□□□□□ -1.44
SCAF11-212ENST00000549162 PATJQ8NI35 1801 aa6.03□□□□□ -1.44
SCAF11-212ENST00000549162 SPDYE16A6NNV3 312 aaPredicted RBP6.03□□□□□ -1.44
SCAF11-212ENST00000549162 EYA2O00167 538 aa6.03□□□□□ -1.44
SCAF11-212ENST00000549162 GRAPQ13588 217 aa6.03□□□□□ -1.44
SCAF11-212ENST00000549162 GRAPLQ8TC17 118 aaPredicted RBP6.03□□□□□ -1.44
SCAF11-212ENST00000549162 USTQ9Y2C2 406 aa6.03□□□□□ -1.44
SCAF11-212ENST00000549162 SASH1O94885 1247 aa6.03□□□□□ -1.44
SCAF11-212ENST00000549162 MCM2P49736 904 aa6.03□□□□□ -1.44
SCAF11-212ENST00000549162 NOL9Q5SY16 702 aaKnown RBP6.03□□□□□ -1.44
SCAF11-212ENST00000549162 LRRC4BQ9NT99 713 aa6.03□□□□□ -1.44
SCAF11-212ENST00000549162 RFX1P22670 979 aa6.02□□□□□ -1.45
SCAF11-212ENST00000549162 RPS12P25398 132 aaKnown RBP6.02□□□□□ -1.45
SCAF11-212ENST00000549162 PTGER2P43116 358 aa6.02□□□□□ -1.45
SCAF11-212ENST00000549162 TTF1Q15361 905 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-212ENST00000549162 PPP4R3BQ5MIZ7 849 aa6.02□□□□□ -1.45
SCAF11-212ENST00000549162 SPDYE1Q8NFV5 336 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-212ENST00000549162 KIAA1522Q9P206 1035 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-212ENST00000549162 PPM1GO15355 546 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-212ENST00000549162 NPR1P16066 1061 aa6.02□□□□□ -1.45
SCAF11-212ENST00000549162 ZNF579Q8NAF0 562 aaKnown RBP6.02□□□□□ -1.45
SCAF11-212ENST00000549162 TTC14Q96N46 770 aa6.02□□□□□ -1.45
SCAF11-212ENST00000549162 CRBNQ96SW2 442 aa6.02□□□□□ -1.45
SCAF11-212ENST00000549162 BCAR3O75815 825 aa6.02□□□□□ -1.45
SCAF11-212ENST00000549162 NEFLP07196 543 aa6.02□□□□□ -1.45
SCAF11-212ENST00000549162 ZMYM1Q5SVZ6 1142 aa6.02□□□□□ -1.45
SCAF11-212ENST00000549162 G2E3Q7L622 706 aa6.02□□□□□ -1.45
SCAF11-212ENST00000549162 SUPT20HQ8NEM7 779 aa6.02□□□□□ -1.45
SCAF11-212ENST00000549162 TANGO6Q9C0B7 1094 aa6.02□□□□□ -1.45
SCAF11-212ENST00000549162 SLC45A1Q9Y2W3 748 aa6.02□□□□□ -1.45
SCAF11-212ENST00000549162 ORC4O43929 436 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 GNAT2P19087 354 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 ATP2B4P23634 1241 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 CCDC96Q2M329 555 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 EVI5LQ96CN4 794 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 SUCLG2Q96I99 432 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 HHIPL1Q96JK4 782 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 QTRT2Q9H974 415 aaKnown RBP6.01□□□□□ -1.45
SCAF11-212ENST00000549162 ATP6V0A2Q9Y487 856 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 USP16Q9Y5T5 823 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 ZMYM2Q9UBW7 1377 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 KCNQ3O43525 872 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 HMOX1P09601 288 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 ENPEPQ07075 957 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 HHIPL2Q6UWX4 724 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 LBX2Q6XYB7 198 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 IDI2Q9BXS1 227 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 KIF26AQ9ULI4 1882 aaPredicted RBP6.01□□□□□ -1.45
SCAF11-212ENST00000549162 IGHDP01880 384 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 HSPA4P34932 840 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 SLC15A2Q16348 729 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 CNNM4Q6P4Q7 775 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 LPIN2Q92539 896 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 UTP14AQ9BVJ6 771 aaKnown RBP6.01□□□□□ -1.45
SCAF11-212ENST00000549162 SMC4Q9NTJ3 1288 aa6.01□□□□□ -1.45
SCAF11-212ENST00000549162 FOXP2O15409 715 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 GLRX3O76003 335 aaKnown RBP6□□□□□ -1.45
SCAF11-212ENST00000549162 OSBPP22059 807 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 PROSER3Q2NL68 480 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 FAM161AQ3B820 660 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 ATL3Q6DD88 541 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 KIF6Q6ZMV9 814 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 MTMR8Q96EF0 704 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 TMUB1Q9BVT8 246 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 ZNF112Q9UJU3 913 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6□□□□□ -1.45
SCAF11-212ENST00000549162 MAP3K2Q9Y2U5 619 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 BAZ2AQ9UIF9 1905 aaKnown RBP6□□□□□ -1.45
SCAF11-212ENST00000549162 hCG_1984214I3L0E3 225 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 CCDC178Q5BJE1 867 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 POTEAQ6S8J7 498 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 IFNL1Q8IU54 200 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 TTC5Q8N0Z6 440 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 ZNF713Q8N859 430 aaPredicted RBP6□□□□□ -1.45
SCAF11-212ENST00000549162 MAP4K1Q92918 833 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 POLR3GLQ9BT43 218 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 SAGE1Q9NXZ1 904 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 MAST3O60307 1309 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 RBM47A0AV96 593 aaKnown RBP6□□□□□ -1.45
SCAF11-212ENST00000549162 SRGNP10124 158 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 NECTIN1Q15223 517 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 ASAP1Q9ULH1 1129 aa6□□□□□ -1.45
SCAF11-212ENST00000549162 PDE1AP54750 535 aa5.99□□□□□ -1.45
SCAF11-212ENST00000549162 LRRFIP1Q32MZ4 808 aaKnown RBP5.99□□□□□ -1.45
SCAF11-212ENST00000549162 ZGPATQ8N5A5 531 aaKnown RBP5.99□□□□□ -1.45
SCAF11-212ENST00000549162 XAGE3Q8WTP9 111 aa5.99□□□□□ -1.45
SCAF11-212ENST00000549162 BEGAINQ9BUH8 593 aa5.99□□□□□ -1.45
SCAF11-212ENST00000549162 GPHNQ9NQX3 736 aaPredicted RBP5.99□□□□□ -1.45
SCAF11-212ENST00000549162 IQSEC3Q9UPP2 1182 aaPredicted RBP5.99□□□□□ -1.45
SCAF11-212ENST00000549162 PDE6BP35913 854 aa5.99□□□□□ -1.45
SCAF11-212ENST00000549162 RFC5P40937 340 aa5.99□□□□□ -1.45
SCAF11-212ENST00000549162 SAFB2Q14151 953 aaKnown RBP eCLIP5.99□□□□□ -1.45
SCAF11-212ENST00000549162 PUM3Q15397 648 aaKnown RBP5.99□□□□□ -1.45
SCAF11-212ENST00000549162 TXNRD1Q16881 649 aa5.99□□□□□ -1.45
SCAF11-212ENST00000549162 TNNI3KQ59H18 835 aa5.99□□□□□ -1.45
SCAF11-212ENST00000549162 TSR2Q969E8 191 aaKnown RBP5.99□□□□□ -1.45
SCAF11-212ENST00000549162 LLPHQ9BRT6 129 aaKnown RBP5.99□□□□□ -1.45
SCAF11-212ENST00000549162 LSG1Q9H089 658 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms