RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 ARHGAP45Q92619 1136 aa19.83■□□□□ 0.77
CHMP1A-206ENST00000549139 ZBED3Q96IU2 234 aaPredicted RBP19.83■□□□□ 0.77
CHMP1A-206ENST00000549139 BSDC1Q9NW68 430 aaPredicted RBP19.83■□□□□ 0.77
CHMP1A-206ENST00000549139 GRM8O00222 908 aa19.82■□□□□ 0.76
CHMP1A-206ENST00000549139 MMP14P50281 582 aa19.82■□□□□ 0.76
CHMP1A-206ENST00000549139 CTSWP56202 376 aa19.82■□□□□ 0.76
CHMP1A-206ENST00000549139 HABP4Q5JVS0 413 aaKnown RBP19.82■□□□□ 0.76
CHMP1A-206ENST00000549139 ARMC9Q7Z3E5 817 aa19.82■□□□□ 0.76
CHMP1A-206ENST00000549139 TXNRD3Q86VQ6 643 aa19.82■□□□□ 0.76
CHMP1A-206ENST00000549139 CCT4P50991 539 aaKnown RBP19.81■□□□□ 0.76
CHMP1A-206ENST00000549139 CDC5LQ99459 802 aaKnown RBP19.81■□□□□ 0.76
CHMP1A-206ENST00000549139 API5Q9BZZ5 524 aaKnown RBP19.81■□□□□ 0.76
CHMP1A-206ENST00000549139 COA1Q9GZY4 146 aa19.81■□□□□ 0.76
CHMP1A-206ENST00000549139 C9orf78Q9NZ63 289 aaPredicted RBP19.81■□□□□ 0.76
CHMP1A-206ENST00000549139 LAMB1P07942 1786 aa19.8■□□□□ 0.76
CHMP1A-206ENST00000549139 KIF16BQ96L93 1317 aa19.8■□□□□ 0.76
CHMP1A-206ENST00000549139 POTEFA5A3E0 1075 aa19.8■□□□□ 0.76
CHMP1A-206ENST00000549139 ALDH1A1P00352 501 aa19.8■□□□□ 0.76
CHMP1A-206ENST00000549139 CSF1RP07333 972 aa19.8■□□□□ 0.76
CHMP1A-206ENST00000549139 PRKG1Q13976 671 aa19.8■□□□□ 0.76
CHMP1A-206ENST00000549139 APOBEC3FQ8IUX4 373 aaKnown RBP19.8■□□□□ 0.76
CHMP1A-206ENST00000549139 SPEF2Q9C093 1822 aa19.8■□□□□ 0.76
CHMP1A-206ENST00000549139 BCAR3O75815 825 aa19.79■□□□□ 0.76
CHMP1A-206ENST00000549139 OTOP1Q7RTM1 612 aa19.79■□□□□ 0.76
CHMP1A-206ENST00000549139 GREM2Q9H772 168 aa19.79■□□□□ 0.76
CHMP1A-206ENST00000549139 ANGEL1Q9UNK9 670 aaKnown RBP19.79■□□□□ 0.76
CHMP1A-206ENST00000549139 FZD1Q9UP38 647 aa19.79■□□□□ 0.76
CHMP1A-206ENST00000549139 TRIM17Q9Y577 477 aa19.79■□□□□ 0.76
CHMP1A-206ENST00000549139 UTYO14607 1347 aa19.78■□□□□ 0.76
CHMP1A-206ENST00000549139 TRIOBPQ9H2D6 2365 aa19.78■□□□□ 0.76
CHMP1A-206ENST00000549139 RBBP6Q7Z6E9 1792 aaKnown RBP19.78■□□□□ 0.76
CHMP1A-206ENST00000549139 IPO8O15397 1037 aaKnown RBP19.78■□□□□ 0.76
CHMP1A-206ENST00000549139 INHBEP58166 350 aa19.78■□□□□ 0.76
CHMP1A-206ENST00000549139 MAP3K11Q16584 847 aa19.78■□□□□ 0.76
CHMP1A-206ENST00000549139 INTS3Q68E01 1043 aaKnown RBP19.78■□□□□ 0.76
CHMP1A-206ENST00000549139 IFNL1Q8IU54 200 aa19.78■□□□□ 0.76
CHMP1A-206ENST00000549139 MANSC4A6NHS7 340 aaPredicted RBP19.77■□□□□ 0.76
CHMP1A-206ENST00000549139 IGF2BP3O00425 579 aaKnown RBP eCLIP19.77■□□□□ 0.76
CHMP1A-206ENST00000549139 KLRK1P26718 216 aa19.77■□□□□ 0.76
CHMP1A-206ENST00000549139 FOXO4P98177 505 aa19.77■□□□□ 0.76
CHMP1A-206ENST00000549139 TTLL5Q6EMB2 1281 aa19.77■□□□□ 0.76
CHMP1A-206ENST00000549139 KIAA0825Q8IV33 1275 aa19.77■□□□□ 0.76
CHMP1A-206ENST00000549139 FBXW7Q969H0 707 aa19.77■□□□□ 0.76
CHMP1A-206ENST00000549139 SSC5DA1L4H1 1573 aa19.77■□□□□ 0.76
CHMP1A-206ENST00000549139 COL1A1P02452 1464 aaPredicted RBP19.76■□□□□ 0.75
CHMP1A-206ENST00000549139 NBPF7P0C2Y1 421 aaPredicted RBP19.76■□□□□ 0.75
CHMP1A-206ENST00000549139 LEMD3Q9Y2U8 911 aa19.76■□□□□ 0.75
CHMP1A-206ENST00000549139 ZBTB48P10074 688 aaPredicted RBP19.75■□□□□ 0.75
CHMP1A-206ENST00000549139 SLC10A4Q96EP9 437 aa19.75■□□□□ 0.75
CHMP1A-206ENST00000549139 WNK4Q96J92 1243 aa19.75■□□□□ 0.75
CHMP1A-206ENST00000549139 CLMNQ96JQ2 1002 aa19.75■□□□□ 0.75
CHMP1A-206ENST00000549139 USP44Q9H0E7 712 aa19.75■□□□□ 0.75
CHMP1A-206ENST00000549139 DEFB129Q9H1M3 183 aa19.75■□□□□ 0.75
CHMP1A-206ENST00000549139 ITGA6P23229 1130 aa19.74■□□□□ 0.75
CHMP1A-206ENST00000549139 PTPN22Q9Y2R2 807 aa19.74■□□□□ 0.75
CHMP1A-206ENST00000549139 ZNF804BA4D1E1 1349 aa19.74■□□□□ 0.75
CHMP1A-206ENST00000549139 GTF2IP78347 998 aa19.73■□□□□ 0.75
CHMP1A-206ENST00000549139 CAP1Q01518 475 aa19.73■□□□□ 0.75
CHMP1A-206ENST00000549139 EPHA10Q5JZY3 1008 aa19.73■□□□□ 0.75
CHMP1A-206ENST00000549139 ATF7IPQ6VMQ6 1270 aa19.73■□□□□ 0.75
CHMP1A-206ENST00000549139 MTMR14Q8NCE2 650 aa19.73■□□□□ 0.75
CHMP1A-206ENST00000549139 FRAT1Q92837 279 aaPredicted RBP19.73■□□□□ 0.75
CHMP1A-206ENST00000549139 ARMC5Q96C12 935 aa19.73■□□□□ 0.75
CHMP1A-206ENST00000549139 KAZALD1Q96I82 304 aa19.73■□□□□ 0.75
CHMP1A-206ENST00000549139 SUCLG2Q96I99 432 aa19.73■□□□□ 0.75
CHMP1A-206ENST00000549139 SZT2Q5T011 3432 aa19.72■□□□□ 0.75
CHMP1A-206ENST00000549139 ECM29Q5VYK3 1845 aa19.72■□□□□ 0.75
CHMP1A-206ENST00000549139 ANKRD18BA2A2Z9 1011 aa19.72■□□□□ 0.75
CHMP1A-206ENST00000549139 UNCXA6NJT0 531 aa19.72■□□□□ 0.75
CHMP1A-206ENST00000549139 TRIM27P14373 513 aa19.72■□□□□ 0.75
CHMP1A-206ENST00000549139 ZKSCAN2Q63HK3 967 aa19.72■□□□□ 0.75
CHMP1A-206ENST00000549139 LMBR1LQ6UX01 489 aa19.72■□□□□ 0.75
CHMP1A-206ENST00000549139 CERS5Q8N5B7 392 aa19.72■□□□□ 0.75
CHMP1A-206ENST00000549139 IGHMBP2P38935 993 aaKnown RBP19.71■□□□□ 0.75
CHMP1A-206ENST00000549139 CRHR2Q13324 411 aa19.71■□□□□ 0.75
CHMP1A-206ENST00000549139 IFIT5Q13325 482 aaKnown RBP19.71■□□□□ 0.75
CHMP1A-206ENST00000549139 ERO1AQ96HE7 468 aa19.71■□□□□ 0.75
CHMP1A-206ENST00000549139 PCDHAC2Q9Y5I4 1007 aa19.71■□□□□ 0.75
CHMP1A-206ENST00000549139 IRS2Q9Y4H2 1338 aa19.71■□□□□ 0.75
CHMP1A-206ENST00000549139 PPP1R12BO60237 982 aaPredicted RBP19.7■□□□□ 0.74
CHMP1A-206ENST00000549139 EN2P19622 333 aaPredicted RBP19.7■□□□□ 0.74
CHMP1A-206ENST00000549139 GJA5P36382 358 aa19.7■□□□□ 0.74
CHMP1A-206ENST00000549139 FXR1P51114 621 aaKnown RBP eCLIP19.7■□□□□ 0.74
CHMP1A-206ENST00000549139 DLGAP5Q15398 846 aa19.7■□□□□ 0.74
CHMP1A-206ENST00000549139 CD99L2Q8TCZ2 262 aa19.7■□□□□ 0.74
CHMP1A-206ENST00000549139 ANKRD2Q9GZV1 360 aa19.7■□□□□ 0.74
CHMP1A-206ENST00000549139 CD209Q9NNX6 404 aa19.7■□□□□ 0.74
CHMP1A-206ENST00000549139 PPP2R3BQ9Y5P8 575 aa19.7■□□□□ 0.74
CHMP1A-206ENST00000549139 TESPA1A2RU30 521 aaPredicted RBP19.69■□□□□ 0.74
CHMP1A-206ENST00000549139 CCDC57Q2TAC2 916 aa19.69■□□□□ 0.74
CHMP1A-206ENST00000549139 RABL6Q3YEC7 729 aaPredicted RBP19.69■□□□□ 0.74
CHMP1A-206ENST00000549139 MPHOSPH8Q99549 860 aa19.69■□□□□ 0.74
CHMP1A-206ENST00000549139 PTPN18Q99952 460 aa19.69■□□□□ 0.74
CHMP1A-206ENST00000549139 HDAC5Q9UQL6 1122 aa19.69■□□□□ 0.74
CHMP1A-206ENST00000549139 CHMP3Q9Y3E7 222 aa19.69■□□□□ 0.74
CHMP1A-206ENST00000549139 AOX1Q06278 1338 aa19.69■□□□□ 0.74
CHMP1A-206ENST00000549139 RANBP2P49792 3224 aaKnown RBP19.68■□□□□ 0.74
CHMP1A-206ENST00000549139 BICC1Q9H694 974 aaKnown RBP19.68■□□□□ 0.74
CHMP1A-206ENST00000549139 EFCC1Q9HA90 598 aa19.68■□□□□ 0.74
CHMP1A-206ENST00000549139 USP2O75604 605 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms