RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 KRT28Q7Z3Y7 464 aa11.5□□□□□ -0.57
SMARCD1-205ENST00000548573 MEGF6O75095 1541 aa11.5□□□□□ -0.57
SMARCD1-205ENST00000548573 ZNF142P52746 1687 aaPredicted RBP11.5□□□□□ -0.57
SMARCD1-205ENST00000548573 PSDA5PKW4 1024 aaPredicted RBP11.5□□□□□ -0.57
SMARCD1-205ENST00000548573 SLU7O95391 586 aaKnown RBP11.5□□□□□ -0.57
SMARCD1-205ENST00000548573 IFIT1P09914 478 aaKnown RBP11.5□□□□□ -0.57
SMARCD1-205ENST00000548573 NDUFA8P51970 172 aa11.5□□□□□ -0.57
SMARCD1-205ENST00000548573 STK38Q15208 465 aa11.5□□□□□ -0.57
SMARCD1-205ENST00000548573 SF3A1Q15459 793 aaKnown RBP11.5□□□□□ -0.57
SMARCD1-205ENST00000548573 ZRSR1Q15695 479 aaKnown RBP11.5□□□□□ -0.57
SMARCD1-205ENST00000548573 LRRFIP1Q32MZ4 808 aaKnown RBP11.5□□□□□ -0.57
SMARCD1-205ENST00000548573 BRAPQ7Z569 592 aa11.5□□□□□ -0.57
SMARCD1-205ENST00000548573 ATG3Q9NT62 314 aa11.5□□□□□ -0.57
SMARCD1-205ENST00000548573 NAP1L2Q9ULW6 460 aaPredicted RBP11.5□□□□□ -0.57
SMARCD1-205ENST00000548573 A0A0G2JLW4 131 aa11.49□□□□□ -0.57
SMARCD1-205ENST00000548573 A0A1B0GVL5 298 aa11.49□□□□□ -0.57
SMARCD1-205ENST00000548573 CIAO1O76071 339 aa11.49□□□□□ -0.57
SMARCD1-205ENST00000548573 GLI3P10071 1580 aa11.49□□□□□ -0.57
SMARCD1-205ENST00000548573 PIP4K2AP48426 406 aaPredicted RBP11.49□□□□□ -0.57
SMARCD1-205ENST00000548573 TIMM10P62072 90 aa11.49□□□□□ -0.57
SMARCD1-205ENST00000548573 TPM4P67936 248 aa11.49□□□□□ -0.57
SMARCD1-205ENST00000548573 NLRP2Q9NX02 1062 aa11.49□□□□□ -0.57
SMARCD1-205ENST00000548573 TRMT1Q9NXH9 659 aaKnown RBP11.49□□□□□ -0.57
SMARCD1-205ENST00000548573 FAM53CQ9NYF3 392 aa11.49□□□□□ -0.57
SMARCD1-205ENST00000548573 NEDD4P46934 1319 aa11.49□□□□□ -0.57
SMARCD1-205ENST00000548573 A0A087WWV3 80 aa11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 EYA2O00167 538 aa11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 SPTLC2O15270 562 aa11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 NLRP12P59046 1061 aa11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 DPCR1Q3MIW9 517 aa11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 KMT5BQ4FZB7 885 aa11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 E4F1Q66K89 784 aaPredicted RBP11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 FBXO18Q8NFZ0 1043 aa11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 C8orf76Q96K31 380 aa11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 L2HGDHQ9H9P8 463 aa11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 CWC25Q9NXE8 425 aaPredicted RBP11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 ALS2Q96Q42 1657 aa11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 M0R2C6 588 aa11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 NRDCO43847 1150 aa11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 IMMTQ16891 758 aaKnown RBP11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 MYSM1Q5VVJ2 828 aa11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 CHST3Q7LGC8 479 aa11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 XPO4Q9C0E2 1151 aaKnown RBP11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 CCDC9Q9Y3X0 531 aaKnown RBP11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 CLIC4Q9Y696 253 aa11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 PKD1L3Q7Z443 1732 aa11.48□□□□□ -0.57
SMARCD1-205ENST00000548573 TJP1Q07157 1748 aa11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 DDX60Q8IY21 1712 aaKnown RBP11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 A0A1B0GUL7 405 aa11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 IKBKBO14920 756 aa11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 ZFYP08048 801 aaPredicted RBP11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 SLC3A2P08195 630 aaKnown RBP11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 CMA1P23946 247 aa11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 ZC3H6P61129 1189 aaKnown RBP11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 TTLL5Q6EMB2 1281 aa11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 KRT222Q8N1A0 295 aa11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 ERCC4Q92889 916 aaPredicted RBP11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 IFNKQ9P0W0 207 aa11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 WDR19Q8NEZ3 1342 aa11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 NUP188Q5SRE5 1749 aa11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 NWD2Q9ULI1 1742 aa11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 CYP27B1O15528 508 aa11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 ZNF202O95125 648 aa11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 SMC2O95347 1197 aa11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 SFPQP23246 707 aaKnown RBP eCLIP11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 CABP4P57796 275 aa11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 NCAPHQ15003 741 aa11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 ARMCX5Q6P1M9 558 aa11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 MB21D2Q8IYB1 491 aaPredicted RBP11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 OSBP2Q969R2 916 aa11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 PPP1R13BQ96KQ4 1090 aa11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 TIGD1Q96MW7 591 aa11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 ORC3Q9UBD5 711 aaPredicted RBP11.47□□□□□ -0.57
SMARCD1-205ENST00000548573 PARP4Q9UKK3 1724 aaKnown RBP11.46□□□□□ -0.57
SMARCD1-205ENST00000548573 CCP110O43303 1012 aa11.46□□□□□ -0.57
SMARCD1-205ENST00000548573 PPFIA3O75145 1194 aa11.46□□□□□ -0.57
SMARCD1-205ENST00000548573 ELF2Q15723 593 aa11.46□□□□□ -0.57
SMARCD1-205ENST00000548573 LRRC24Q50LG9 513 aa11.46□□□□□ -0.57
SMARCD1-205ENST00000548573 ANO1Q5XXA6 986 aa11.46□□□□□ -0.57
SMARCD1-205ENST00000548573 FBXO38Q6PIJ6 1188 aa11.46□□□□□ -0.57
SMARCD1-205ENST00000548573 SYNE3Q6ZMZ3 975 aa11.46□□□□□ -0.57
SMARCD1-205ENST00000548573 TMC6Q7Z403 805 aa11.46□□□□□ -0.57
SMARCD1-205ENST00000548573 CCDC191Q8NCU4 936 aa11.46□□□□□ -0.57
SMARCD1-205ENST00000548573 HPS5Q9UPZ3 1129 aa11.46□□□□□ -0.57
SMARCD1-205ENST00000548573 COL18A1P39060 1754 aa11.46□□□□□ -0.58
SMARCD1-205ENST00000548573 KLF18A0A0U1RQI7 1052 aa11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 FOXP2O15409 715 aa11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 PRC1O43663 620 aa11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 POLR3DP05423 398 aaPredicted RBP11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 CCDC93Q567U6 631 aa11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 CCDC158Q5M9N0 1113 aa11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 AXDND1Q5T1B0 1012 aaPredicted RBP11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 NCOA7Q8NI08 942 aa11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 FBXW7Q969H0 707 aa11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 FBXO3Q9UK99 471 aa11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 ABCC12Q96J65 1359 aa11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 C1orf167Q5SNV9 1468 aa11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 GOLGA8BA8MQT2 603 aa11.45□□□□□ -0.58
SMARCD1-205ENST00000548573 NBPF26B4DH59 902 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms