RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 KRTAP9-9Q9BYP9 154 aa7.31□□□□□ -1.24
DEPDC4-205ENST00000548313 KRTAP9-4Q9BYQ2 154 aa7.31□□□□□ -1.24
DEPDC4-205ENST00000548313 MUC3BQ9H195 1237 aa7.31□□□□□ -1.24
DEPDC4-205ENST00000548313 NPHS2Q9NP85 383 aa7.31□□□□□ -1.24
DEPDC4-205ENST00000548313 FAM177BA6PVY3 158 aa7.3□□□□□ -1.24
DEPDC4-205ENST00000548313 GIPC1O14908 333 aa7.3□□□□□ -1.24
DEPDC4-205ENST00000548313 PTPRAP18433 802 aa7.3□□□□□ -1.24
DEPDC4-205ENST00000548313 MSL1Q68DK7 614 aa7.3□□□□□ -1.24
DEPDC4-205ENST00000548313 ILDR2Q71H61 639 aa7.3□□□□□ -1.24
DEPDC4-205ENST00000548313 BHLHE41Q9C0J9 482 aaPredicted RBP7.3□□□□□ -1.24
DEPDC4-205ENST00000548313 ADAM19Q9H013 955 aa7.3□□□□□ -1.24
DEPDC4-205ENST00000548313 LATS2Q9NRM7 1088 aa7.3□□□□□ -1.24
DEPDC4-205ENST00000548313 PPP4R2Q9NY27 417 aa7.3□□□□□ -1.24
DEPDC4-205ENST00000548313 TRAK1Q9UPV9 953 aa7.3□□□□□ -1.24
DEPDC4-205ENST00000548313 PRPF40AO75400 957 aaKnown RBP7.29□□□□□ -1.24
DEPDC4-205ENST00000548313 GDF6Q6KF10 455 aaPredicted RBP7.29□□□□□ -1.24
DEPDC4-205ENST00000548313 WFDC8Q8IUA0 241 aa7.29□□□□□ -1.24
DEPDC4-205ENST00000548313 CCNJLQ8IV13 435 aa7.29□□□□□ -1.24
DEPDC4-205ENST00000548313 DMRTC2Q8IXT2 367 aaPredicted RBP7.29□□□□□ -1.24
DEPDC4-205ENST00000548313 DTWD1Q8N5C7 304 aa7.29□□□□□ -1.24
DEPDC4-205ENST00000548313 EPS8L3Q8TE67 593 aaKnown RBP7.29□□□□□ -1.24
DEPDC4-205ENST00000548313 EHD4Q9H223 541 aa7.29□□□□□ -1.24
DEPDC4-205ENST00000548313 LIN7BQ9HAP6 207 aa7.29□□□□□ -1.24
DEPDC4-205ENST00000548313 TRIM33Q9UPN9 1127 aa7.29□□□□□ -1.24
DEPDC4-205ENST00000548313 GADD45BO75293 160 aaPredicted RBP7.28□□□□□ -1.24
DEPDC4-205ENST00000548313 ACPPP15309 386 aa7.28□□□□□ -1.24
DEPDC4-205ENST00000548313 CDC27P30260 824 aa7.28□□□□□ -1.24
DEPDC4-205ENST00000548313 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.28□□□□□ -1.24
DEPDC4-205ENST00000548313 MCTP1Q6DN14 999 aa7.28□□□□□ -1.24
DEPDC4-205ENST00000548313 FBXO33Q7Z6M2 555 aa7.28□□□□□ -1.24
DEPDC4-205ENST00000548313 IL22RA1Q8N6P7 574 aa7.28□□□□□ -1.24
DEPDC4-205ENST00000548313 BSNDQ8WZ55 320 aa7.28□□□□□ -1.24
DEPDC4-205ENST00000548313 TCF12Q99081 682 aa7.28□□□□□ -1.24
DEPDC4-205ENST00000548313 SRCIN1Q9C0H9 1055 aa7.28□□□□□ -1.24
DEPDC4-205ENST00000548313 WWC3Q9ULE0 1092 aa7.28□□□□□ -1.24
DEPDC4-205ENST00000548313 TRPA1O75762 1119 aa7.27□□□□□ -1.25
DEPDC4-205ENST00000548313 PRPF40BQ6NWY9 871 aaKnown RBP7.27□□□□□ -1.25
DEPDC4-205ENST00000548313 SLC51AQ86UW1 340 aa7.27□□□□□ -1.25
DEPDC4-205ENST00000548313 ZFYVE1Q9HBF4 777 aa7.27□□□□□ -1.25
DEPDC4-205ENST00000548313 SRA1Q9HD15 236 aaKnown RBP7.27□□□□□ -1.25
DEPDC4-205ENST00000548313 SPG7Q9UQ90 795 aa7.27□□□□□ -1.25
DEPDC4-205ENST00000548313 PPME1Q9Y570 386 aa7.27□□□□□ -1.25
DEPDC4-205ENST00000548313 PAX4O43316 350 aa7.26□□□□□ -1.25
DEPDC4-205ENST00000548313 ITGAEP38570 1179 aa7.26□□□□□ -1.25
DEPDC4-205ENST00000548313 CABP4P57796 275 aa7.26□□□□□ -1.25
DEPDC4-205ENST00000548313 PTPN12Q05209 780 aaKnown RBP7.26□□□□□ -1.25
DEPDC4-205ENST00000548313 ZNF326Q5BKZ1 582 aaKnown RBP7.26□□□□□ -1.25
DEPDC4-205ENST00000548313 MAP4K3Q8IVH8 894 aa7.26□□□□□ -1.25
DEPDC4-205ENST00000548313 DCAF11Q8TEB1 546 aa7.26□□□□□ -1.25
DEPDC4-205ENST00000548313 WFDC12Q8WWY7 111 aa7.26□□□□□ -1.25
DEPDC4-205ENST00000548313 HHIPQ96QV1 700 aa7.26□□□□□ -1.25
DEPDC4-205ENST00000548313 BCL2L13Q9BXK5 485 aa7.26□□□□□ -1.25
DEPDC4-205ENST00000548313 LACRTQ9GZZ8 138 aa7.26□□□□□ -1.25
DEPDC4-205ENST00000548313 PODXL2Q9NZ53 605 aa7.26□□□□□ -1.25
DEPDC4-205ENST00000548313 EIF4EBP3O60516 100 aaPredicted RBP7.25□□□□□ -1.25
DEPDC4-205ENST00000548313 XRCC5P13010 732 aaKnown RBP7.25□□□□□ -1.25
DEPDC4-205ENST00000548313 GNA15P30679 374 aa7.25□□□□□ -1.25
DEPDC4-205ENST00000548313 GRM2Q14416 872 aa7.25□□□□□ -1.25
DEPDC4-205ENST00000548313 FAM117BQ6P1L5 589 aa7.25□□□□□ -1.25
DEPDC4-205ENST00000548313 FBXO11Q86XK2 927 aa7.25□□□□□ -1.25
DEPDC4-205ENST00000548313 WNT8BQ93098 351 aa7.25□□□□□ -1.25
DEPDC4-205ENST00000548313 BCO2Q9BYV7 579 aa7.25□□□□□ -1.25
DEPDC4-205ENST00000548313 BCL11AQ9H165 835 aa7.25□□□□□ -1.25
DEPDC4-205ENST00000548313 SOX13Q9UN79 622 aa7.25□□□□□ -1.25
DEPDC4-205ENST00000548313 A0A096LPE4 126 aa7.24□□□□□ -1.25
DEPDC4-205ENST00000548313 TMEM238LA0A1B0GVL6 79 aa7.24□□□□□ -1.25
DEPDC4-205ENST00000548313 A0A1W2PPZ6 126 aa7.24□□□□□ -1.25
DEPDC4-205ENST00000548313 ITPKAP23677 461 aa7.24□□□□□ -1.25
DEPDC4-205ENST00000548313 TXKP42681 527 aa7.24□□□□□ -1.25
DEPDC4-205ENST00000548313 IREB2P48200 963 aaKnown RBP7.24□□□□□ -1.25
DEPDC4-205ENST00000548313 IGF2-ASQ6U949 168 aa7.24□□□□□ -1.25
DEPDC4-205ENST00000548313 PI16Q6UXB8 463 aa7.24□□□□□ -1.25
DEPDC4-205ENST00000548313 RGS22Q8NE09 1264 aa7.24□□□□□ -1.25
DEPDC4-205ENST00000548313 ASAP3Q8TDY4 903 aa7.24□□□□□ -1.25
DEPDC4-205ENST00000548313 SETDB2Q96T68 719 aa7.24□□□□□ -1.25
DEPDC4-205ENST00000548313 DUSP9Q99956 384 aaKnown RBP7.24□□□□□ -1.25
DEPDC4-205ENST00000548313 COL17A1Q9UMD9 1497 aaPredicted RBP7.24□□□□□ -1.25
DEPDC4-205ENST00000548313 KRTAP4-8A0A0G2JLE6 195 aa7.23□□□□□ -1.25
DEPDC4-205ENST00000548313 H3BRJ5 948 aa7.23□□□□□ -1.25
DEPDC4-205ENST00000548313 GRIA4P48058 902 aa7.23□□□□□ -1.25
DEPDC4-205ENST00000548313 XPCQ01831 940 aaPredicted RBP7.23□□□□□ -1.25
DEPDC4-205ENST00000548313 RPS26P11Q5JNZ5 115 aaPredicted RBP7.23□□□□□ -1.25
DEPDC4-205ENST00000548313 NXPE4Q6UWF7 544 aa7.23□□□□□ -1.25
DEPDC4-205ENST00000548313 GLIS3Q8NEA6 775 aa7.23□□□□□ -1.25
DEPDC4-205ENST00000548313 ABCB6Q9NP58 842 aa7.23□□□□□ -1.25
DEPDC4-205ENST00000548313 SH2B1Q9NRF2 756 aaPredicted RBP7.23□□□□□ -1.25
DEPDC4-205ENST00000548313 PCMTD2Q9NV79 361 aa7.23□□□□□ -1.25
DEPDC4-205ENST00000548313 RBM47A0AV96 593 aaKnown RBP7.22□□□□□ -1.25
DEPDC4-205ENST00000548313 EPHA1P21709 976 aa7.22□□□□□ -1.25
DEPDC4-205ENST00000548313 NOS3P29474 1203 aa7.22□□□□□ -1.25
DEPDC4-205ENST00000548313 PIP4K2BP78356 416 aa7.22□□□□□ -1.25
DEPDC4-205ENST00000548313 DAB2P98082 770 aa7.22□□□□□ -1.25
DEPDC4-205ENST00000548313 SPRED3Q2MJR0 410 aa7.22□□□□□ -1.25
DEPDC4-205ENST00000548313 ADAMTSL4Q6UY14 1074 aa7.22□□□□□ -1.25
DEPDC4-205ENST00000548313 PRR23CQ6ZRP0 262 aa7.22□□□□□ -1.25
DEPDC4-205ENST00000548313 TMC4Q7Z404 712 aa7.22□□□□□ -1.25
DEPDC4-205ENST00000548313 VN1R5Q7Z5H4 357 aa7.22□□□□□ -1.25
DEPDC4-205ENST00000548313 GIPC2Q8TF65 315 aa7.22□□□□□ -1.25
DEPDC4-205ENST00000548313 OSBPL7Q9BZF2 842 aa7.22□□□□□ -1.25
DEPDC4-205ENST00000548313 CLEC4MQ9H2X3 399 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms