RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 NCBP3Q53F19 620 aaKnown RBP25.55■■□□□ 1.68
GATC-202ENST00000548171 SLC10A4Q96EP9 437 aa25.55■■□□□ 1.68
GATC-202ENST00000548171 MYO1BO43795 1136 aa25.54■■□□□ 1.68
GATC-202ENST00000548171 PPP1R12BO60237 982 aaPredicted RBP25.54■■□□□ 1.68
GATC-202ENST00000548171 ZBTB48P10074 688 aaPredicted RBP25.54■■□□□ 1.68
GATC-202ENST00000548171 IRS2Q9Y4H2 1338 aa25.54■■□□□ 1.68
GATC-202ENST00000548171 FKBP1AP62942 108 aaKnown RBP25.53■■□□□ 1.68
GATC-202ENST00000548171 IL1R1P14778 569 aa25.52■■□□□ 1.68
GATC-202ENST00000548171 IFIT5Q13325 482 aaKnown RBP25.52■■□□□ 1.68
GATC-202ENST00000548171 SUPT20HL1Q3ZLR7 823 aa25.52■■□□□ 1.68
GATC-202ENST00000548171 ZNF804AQ7Z570 1209 aa25.52■■□□□ 1.68
GATC-202ENST00000548171 CERS5Q8N5B7 392 aa25.52■■□□□ 1.68
GATC-202ENST00000548171 R3HDMLQ9H3Y0 253 aa25.52■■□□□ 1.68
GATC-202ENST00000548171 IFNL1Q8IU54 200 aa25.51■■□□□ 1.67
GATC-202ENST00000548171 SSC5DA1L4H1 1573 aa25.5■■□□□ 1.67
GATC-202ENST00000548171 TAF5LO75529 589 aa25.5■■□□□ 1.67
GATC-202ENST00000548171 SPDYE2BA6NHP3 402 aa25.49■■□□□ 1.67
GATC-202ENST00000548171 SPDYE6P0CI01 402 aa25.49■■□□□ 1.67
GATC-202ENST00000548171 FOXO4P98177 505 aa25.49■■□□□ 1.67
GATC-202ENST00000548171 WNK4Q96J92 1243 aa25.49■■□□□ 1.67
GATC-202ENST00000548171 FZD1Q9UP38 647 aa25.49■■□□□ 1.67
GATC-202ENST00000548171 FANCIQ9NVI1 1328 aa25.48■■□□□ 1.67
GATC-202ENST00000548171 CFAP100Q494V2 611 aa25.48■■□□□ 1.67
GATC-202ENST00000548171 HELBQ8NG08 1087 aaPredicted RBP25.48■■□□□ 1.67
GATC-202ENST00000548171 RBBP6Q7Z6E9 1792 aaKnown RBP25.47■■□□□ 1.67
GATC-202ENST00000548171 SNAP23O00161 211 aa25.47■■□□□ 1.67
GATC-202ENST00000548171 IREB2P48200 963 aaKnown RBP25.47■■□□□ 1.67
GATC-202ENST00000548171 CLMNQ96JQ2 1002 aa25.47■■□□□ 1.67
GATC-202ENST00000548171 PRMT6Q96LA8 375 aaPredicted RBP25.47■■□□□ 1.67
GATC-202ENST00000548171 F8W031 263 aaPredicted RBP25.46■■□□□ 1.67
GATC-202ENST00000548171 INTS3Q68E01 1043 aaKnown RBP25.46■■□□□ 1.67
GATC-202ENST00000548171 OTUD7BQ6GQQ9 843 aa25.46■■□□□ 1.67
GATC-202ENST00000548171 CHMP3Q9Y3E7 222 aa25.46■■□□□ 1.67
GATC-202ENST00000548171 OTOFQ9HC10 1997 aa25.45■■□□□ 1.67
GATC-202ENST00000548171 CLRN2A0PK11 232 aa25.45■■□□□ 1.66
GATC-202ENST00000548171 VAMP4O75379 141 aa25.45■■□□□ 1.66
GATC-202ENST00000548171 VEZTQ9HBM0 779 aa25.45■■□□□ 1.66
GATC-202ENST00000548171 TRIM17Q9Y577 477 aa25.45■■□□□ 1.66
GATC-202ENST00000548171 ARAP2Q8WZ64 1704 aa25.45■■□□□ 1.66
GATC-202ENST00000548171 IGF2BP3O00425 579 aaKnown RBP eCLIP25.44■■□□□ 1.66
GATC-202ENST00000548171 CCDC57Q2TAC2 916 aa25.44■■□□□ 1.66
GATC-202ENST00000548171 CCDC184Q52MB2 194 aa25.44■■□□□ 1.66
GATC-202ENST00000548171 OTOP1Q7RTM1 612 aa25.44■■□□□ 1.66
GATC-202ENST00000548171 ANKRD13AQ8IZ07 590 aa25.44■■□□□ 1.66
GATC-202ENST00000548171 ERO1AQ96HE7 468 aa25.44■■□□□ 1.66
GATC-202ENST00000548171 PCDHAC2Q9Y5I4 1007 aa25.44■■□□□ 1.66
GATC-202ENST00000548171 RBM5P52756 815 aaKnown RBP eCLIP25.43■■□□□ 1.66
GATC-202ENST00000548171 TNFAIP1Q13829 316 aa25.43■■□□□ 1.66
GATC-202ENST00000548171 TAF7LQ5H9L4 462 aa25.43■■□□□ 1.66
GATC-202ENST00000548171 BEND3Q5T5X7 828 aa25.43■■□□□ 1.66
GATC-202ENST00000548171 NBPF12Q5TAG4 269 aaPredicted RBP25.43■■□□□ 1.66
GATC-202ENST00000548171 LMBR1LQ6UX01 489 aa25.43■■□□□ 1.66
GATC-202ENST00000548171 LDHAL6AQ6ZMR3 332 aa25.43■■□□□ 1.66
GATC-202ENST00000548171 RASA3Q14644 834 aa25.42■■□□□ 1.66
GATC-202ENST00000548171 WDR63Q8IWG1 891 aa25.42■■□□□ 1.66
GATC-202ENST00000548171 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.42■■□□□ 1.66
GATC-202ENST00000548171 KIAA0100Q14667 2235 aaKnown RBP25.41■■□□□ 1.66
GATC-202ENST00000548171 FAM205AQ6ZU69 1335 aa25.41■■□□□ 1.66
GATC-202ENST00000548171 USP2O75604 605 aaPredicted RBP25.41■■□□□ 1.66
GATC-202ENST00000548171 GCC1Q96CN9 775 aa25.41■■□□□ 1.66
GATC-202ENST00000548171 CNNM1Q9NRU3 951 aa25.41■■□□□ 1.66
GATC-202ENST00000548171 F6X3S4 739 aa25.4■■□□□ 1.66
GATC-202ENST00000548171 GRM8O00222 908 aa25.4■■□□□ 1.66
GATC-202ENST00000548171 SERPINA10Q9UK55 444 aa25.4■■□□□ 1.66
GATC-202ENST00000548171 TESPA1A2RU30 521 aaPredicted RBP25.39■■□□□ 1.66
GATC-202ENST00000548171 EXOSC9Q06265 439 aaKnown RBP25.39■■□□□ 1.66
GATC-202ENST00000548171 CRHR2Q13324 411 aa25.39■■□□□ 1.66
GATC-202ENST00000548171 SPDYE2Q495Y8 402 aa25.39■■□□□ 1.66
GATC-202ENST00000548171 JAG2Q9Y219 1238 aa25.39■■□□□ 1.66
GATC-202ENST00000548171 AOX1Q06278 1338 aa25.38■■□□□ 1.65
GATC-202ENST00000548171 PLIN1O60240 522 aa25.38■■□□□ 1.65
GATC-202ENST00000548171 UBE4AQ14139 1066 aa25.38■■□□□ 1.65
GATC-202ENST00000548171 MFSD14BQ5SR56 506 aa25.38■■□□□ 1.65
GATC-202ENST00000548171 TDRD7Q8NHU6 1098 aaKnown RBP25.38■■□□□ 1.65
GATC-202ENST00000548171 ZNF594Q96JF6 807 aaPredicted RBP25.38■■□□□ 1.65
GATC-202ENST00000548171 PTPN22Q9Y2R2 807 aa25.38■■□□□ 1.65
GATC-202ENST00000548171 GJA5P36382 358 aa25.37■■□□□ 1.65
GATC-202ENST00000548171 EPHA10Q5JZY3 1008 aa25.37■■□□□ 1.65
GATC-202ENST00000548171 C9orf78Q9NZ63 289 aaPredicted RBP25.37■■□□□ 1.65
GATC-202ENST00000548171 ZNF70Q9UC06 446 aaPredicted RBP25.37■■□□□ 1.65
GATC-202ENST00000548171 TTF2Q9UNY4 1162 aaKnown RBP25.37■■□□□ 1.65
GATC-202ENST00000548171 ALDH1L1O75891 902 aa25.36■■□□□ 1.65
GATC-202ENST00000548171 HIBADHP31937 336 aaKnown RBP25.36■■□□□ 1.65
GATC-202ENST00000548171 EFCC1Q9HA90 598 aa25.36■■□□□ 1.65
GATC-202ENST00000548171 SP3Q02447 781 aa25.35■■□□□ 1.65
GATC-202ENST00000548171 CD99L2Q8TCZ2 262 aa25.35■■□□□ 1.65
GATC-202ENST00000548171 ARMC5Q96C12 935 aa25.35■■□□□ 1.65
GATC-202ENST00000548171 PTPN18Q99952 460 aa25.35■■□□□ 1.65
GATC-202ENST00000548171 OPTNQ96CV9 577 aa25.34■■□□□ 1.65
GATC-202ENST00000548171 ELP3Q9H9T3 547 aa25.34■■□□□ 1.65
GATC-202ENST00000548171 POTEFA5A3E0 1075 aa25.33■■□□□ 1.65
GATC-202ENST00000548171 GYG1P46976 350 aa25.33■■□□□ 1.65
GATC-202ENST00000548171 TNNI2P48788 182 aa25.33■■□□□ 1.65
GATC-202ENST00000548171 DZIP1LQ8IYY4 767 aaKnown RBP25.33■■□□□ 1.65
GATC-202ENST00000548171 TEPSINQ96N21 525 aa25.33■■□□□ 1.65
GATC-202ENST00000548171 TDRD3Q9H7E2 651 aaKnown RBP25.33■■□□□ 1.65
GATC-202ENST00000548171 MRS2Q9HD23 443 aa25.33■■□□□ 1.65
GATC-202ENST00000548171 HTTP42858 3142 aa25.32■■□□□ 1.64
GATC-202ENST00000548171 ARHGEF6Q15052 776 aa25.32■■□□□ 1.64
GATC-202ENST00000548171 MS4A4AQ96JQ5 239 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms