RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 PODNQ7Z5L7 613 aa8.52□□□□□ -1.05
SCAF11-211ENST00000547950 SAPCD2Q86UD0 394 aa8.52□□□□□ -1.05
SCAF11-211ENST00000547950 SPNS2Q8IVW8 549 aa8.52□□□□□ -1.05
SCAF11-211ENST00000547950 FBXO22Q8NEZ5 403 aa8.52□□□□□ -1.05
SCAF11-211ENST00000547950 BEGAINQ9BUH8 593 aa8.52□□□□□ -1.05
SCAF11-211ENST00000547950 CHMP3Q9Y3E7 222 aa8.52□□□□□ -1.05
SCAF11-211ENST00000547950 COL4A1P02462 1669 aa8.52□□□□□ -1.05
SCAF11-211ENST00000547950 LTBP1Q14766 1721 aa8.51□□□□□ -1.05
SCAF11-211ENST00000547950 ANKRD18BA2A2Z9 1011 aa8.51□□□□□ -1.05
SCAF11-211ENST00000547950 USP17L3A6NCW0 530 aa8.51□□□□□ -1.05
SCAF11-211ENST00000547950 USP17L4A6NCW7 530 aa8.51□□□□□ -1.05
SCAF11-211ENST00000547950 ADM5C9JUS6 153 aa8.51□□□□□ -1.05
SCAF11-211ENST00000547950 AOC2O75106 756 aa8.51□□□□□ -1.05
SCAF11-211ENST00000547950 USP17L8P0C7I0 530 aa8.51□□□□□ -1.05
SCAF11-211ENST00000547950 KCNJ4P48050 445 aa8.51□□□□□ -1.05
SCAF11-211ENST00000547950 SCARF1Q14162 830 aa8.51□□□□□ -1.05
SCAF11-211ENST00000547950 BEND3Q5T5X7 828 aa8.51□□□□□ -1.05
SCAF11-211ENST00000547950 USP17L1Q7RTZ2 530 aa8.51□□□□□ -1.05
SCAF11-211ENST00000547950 TXNRD3Q86VQ6 643 aa8.51□□□□□ -1.05
SCAF11-211ENST00000547950 AGBL3Q8NEM8 1001 aa8.51□□□□□ -1.05
SCAF11-211ENST00000547950 MXD3Q9BW11 206 aa8.51□□□□□ -1.05
SCAF11-211ENST00000547950 PLA2G12BQ9BX93 195 aa8.51□□□□□ -1.05
SCAF11-211ENST00000547950 MFRPQ9BY79 579 aa8.51□□□□□ -1.05
SCAF11-211ENST00000547950 ANKRD2Q9GZV1 360 aa8.51□□□□□ -1.05
SCAF11-211ENST00000547950 C9orf78Q9NZ63 289 aaPredicted RBP8.51□□□□□ -1.05
SCAF11-211ENST00000547950 LEMD3Q9Y2U8 911 aa8.51□□□□□ -1.05
SCAF11-211ENST00000547950 DUOX1Q9NRD9 1551 aa8.51□□□□□ -1.05
SCAF11-211ENST00000547950 ZNF804BA4D1E1 1349 aa8.51□□□□□ -1.05
SCAF11-211ENST00000547950 ASTN2O75129 1339 aaPredicted RBP8.51□□□□□ -1.05
SCAF11-211ENST00000547950 PLIN1O60240 522 aa8.5□□□□□ -1.05
SCAF11-211ENST00000547950 TAF5LO75529 589 aa8.5□□□□□ -1.05
SCAF11-211ENST00000547950 KLRK1P26718 216 aa8.5□□□□□ -1.05
SCAF11-211ENST00000547950 HUNKP57058 714 aa8.5□□□□□ -1.05
SCAF11-211ENST00000547950 ZNF280AP59817 542 aaPredicted RBP8.5□□□□□ -1.05
SCAF11-211ENST00000547950 FOXO4P98177 505 aa8.5□□□□□ -1.05
SCAF11-211ENST00000547950 IFIT5Q13325 482 aaKnown RBP8.5□□□□□ -1.05
SCAF11-211ENST00000547950 TAF7LQ5H9L4 462 aa8.5□□□□□ -1.05
SCAF11-211ENST00000547950 LMBR1LQ6UX01 489 aa8.5□□□□□ -1.05
SCAF11-211ENST00000547950 SULF1Q8IWU6 871 aa8.5□□□□□ -1.05
SCAF11-211ENST00000547950 HELBQ8NG08 1087 aaPredicted RBP8.5□□□□□ -1.05
SCAF11-211ENST00000547950 GMLQ99445 158 aa8.5□□□□□ -1.05
SCAF11-211ENST00000547950 COA1Q9GZY4 146 aa8.5□□□□□ -1.05
SCAF11-211ENST00000547950 MYOZ2Q9NPC6 264 aa8.5□□□□□ -1.05
SCAF11-211ENST00000547950 PRDM10Q9NQV6 1147 aa8.5□□□□□ -1.05
SCAF11-211ENST00000547950 GGA3Q9NZ52 723 aa8.5□□□□□ -1.05
SCAF11-211ENST00000547950 SCAF8Q9UPN6 1271 aaKnown RBP8.5□□□□□ -1.05
SCAF11-211ENST00000547950 ANKRD36CQ5JPF3 1778 aa8.49□□□□□ -1.05
SCAF11-211ENST00000547950 ADAMTSL1Q8N6G6 1762 aa8.49□□□□□ -1.05
SCAF11-211ENST00000547950 SNAP23O00161 211 aa8.49□□□□□ -1.05
SCAF11-211ENST00000547950 HSPA8P11142 646 aaKnown RBP8.49□□□□□ -1.05
SCAF11-211ENST00000547950 MAP2K2P36507 400 aa8.49□□□□□ -1.05
SCAF11-211ENST00000547950 CHRNDQ07001 517 aa8.49□□□□□ -1.05
SCAF11-211ENST00000547950 CCDC57Q2TAC2 916 aa8.49□□□□□ -1.05
SCAF11-211ENST00000547950 EPHA10Q5JZY3 1008 aa8.49□□□□□ -1.05
SCAF11-211ENST00000547950 DACT2Q5SW24 774 aa8.49□□□□□ -1.05
SCAF11-211ENST00000547950 ANGEL2Q5VTE6 544 aaKnown RBP8.49□□□□□ -1.05
SCAF11-211ENST00000547950 TTLL5Q6EMB2 1281 aa8.49□□□□□ -1.05
SCAF11-211ENST00000547950 OGFOD1Q8N543 542 aa8.49□□□□□ -1.05
SCAF11-211ENST00000547950 C2orf69Q8N8R5 385 aa8.49□□□□□ -1.05
SCAF11-211ENST00000547950 ZNF594Q96JF6 807 aaPredicted RBP8.49□□□□□ -1.05
SCAF11-211ENST00000547950 HHIPL1Q96JK4 782 aa8.49□□□□□ -1.05
SCAF11-211ENST00000547950 SRCIN1Q9C0H9 1055 aa8.49□□□□□ -1.05
SCAF11-211ENST00000547950 TSKSQ9UJT2 592 aa8.49□□□□□ -1.05
SCAF11-211ENST00000547950 TAF1P21675 1872 aa8.49□□□□□ -1.05
SCAF11-211ENST00000547950 DDX60Q8IY21 1712 aaKnown RBP8.49□□□□□ -1.05
SCAF11-211ENST00000547950 LAMB2P55268 1798 aa8.48□□□□□ -1.05
SCAF11-211ENST00000547950 GRM8O00222 908 aa8.48□□□□□ -1.05
SCAF11-211ENST00000547950 ALDH1L1O75891 902 aa8.48□□□□□ -1.05
SCAF11-211ENST00000547950 GTF2IP78347 998 aa8.48□□□□□ -1.05
SCAF11-211ENST00000547950 MMRN1Q13201 1228 aa8.48□□□□□ -1.05
SCAF11-211ENST00000547950 NBPF9Q3BBW0 867 aa8.48□□□□□ -1.05
SCAF11-211ENST00000547950 STRIP1Q5VSL9 837 aa8.48□□□□□ -1.05
SCAF11-211ENST00000547950 PRAMEF18Q5VWM3 479 aa8.48□□□□□ -1.05
SCAF11-211ENST00000547950 RGMBQ6NW40 437 aa8.48□□□□□ -1.05
SCAF11-211ENST00000547950 LDHAL6AQ6ZMR3 332 aa8.48□□□□□ -1.05
SCAF11-211ENST00000547950 CDCA5Q96FF9 252 aa8.48□□□□□ -1.05
SCAF11-211ENST00000547950 GBA2Q9HCG7 927 aaPredicted RBP8.48□□□□□ -1.05
SCAF11-211ENST00000547950 CNNM1Q9NRU3 951 aa8.48□□□□□ -1.05
SCAF11-211ENST00000547950 ZNF521Q96K83 1311 aa8.48□□□□□ -1.05
SCAF11-211ENST00000547950 MED23Q9ULK4 1368 aa8.48□□□□□ -1.05
SCAF11-211ENST00000547950 E9PSI1 815 aa8.47□□□□□ -1.05
SCAF11-211ENST00000547950 ZNF157P51786 506 aaPredicted RBP8.47□□□□□ -1.05
SCAF11-211ENST00000547950 KIAA0825Q8IV33 1275 aa8.47□□□□□ -1.05
SCAF11-211ENST00000547950 MRPL50Q8N5N7 158 aaKnown RBP8.47□□□□□ -1.05
SCAF11-211ENST00000547950 CDCA7LQ96GN5 454 aa8.47□□□□□ -1.05
SCAF11-211ENST00000547950 ZIC5Q96T25 663 aa8.47□□□□□ -1.05
SCAF11-211ENST00000547950 KRTAP3-3Q9BYR6 98 aa8.47□□□□□ -1.05
SCAF11-211ENST00000547950 KRTAP3-2Q9BYR7 98 aa8.47□□□□□ -1.05
SCAF11-211ENST00000547950 CD209Q9NNX6 404 aa8.47□□□□□ -1.05
SCAF11-211ENST00000547950 PCNTO95613 3336 aa8.47□□□□□ -1.05
SCAF11-211ENST00000547950 SASH1O94885 1247 aa8.46□□□□□ -1.06
SCAF11-211ENST00000547950 NBPF7P0C2Y1 421 aaPredicted RBP8.46□□□□□ -1.06
SCAF11-211ENST00000547950 SLFN5Q08AF3 891 aa8.46□□□□□ -1.06
SCAF11-211ENST00000547950 NOGQ13253 232 aa8.46□□□□□ -1.06
SCAF11-211ENST00000547950 MOB2Q70IA6 237 aa8.46□□□□□ -1.06
SCAF11-211ENST00000547950 SSH1Q8WYL5 1049 aa8.46□□□□□ -1.06
SCAF11-211ENST00000547950 CCDC102AQ96A19 550 aa8.46□□□□□ -1.06
SCAF11-211ENST00000547950 SUCLG2Q96I99 432 aa8.46□□□□□ -1.06
SCAF11-211ENST00000547950 HDAC9Q9UKV0 1011 aa8.46□□□□□ -1.06
SCAF11-211ENST00000547950 JAG2Q9Y219 1238 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms