RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 ARAP2Q8WZ64 1704 aa12.08□□□□□ -0.48
CDK4-205ENST00000547853 MANSC4A6NHS7 340 aaPredicted RBP12.07□□□□□ -0.48
CDK4-205ENST00000547853 WNT10BO00744 389 aa12.07□□□□□ -0.48
CDK4-205ENST00000547853 SASH1O94885 1247 aa12.07□□□□□ -0.48
CDK4-205ENST00000547853 CALD1Q05682 793 aaKnown RBP12.07□□□□□ -0.48
CDK4-205ENST00000547853 AIMP1Q12904 312 aaKnown RBP12.07□□□□□ -0.48
CDK4-205ENST00000547853 CRHR2Q13324 411 aa12.07□□□□□ -0.48
CDK4-205ENST00000547853 NFE2L2Q16236 605 aa12.07□□□□□ -0.48
CDK4-205ENST00000547853 PLEKHF1Q96S99 279 aa12.07□□□□□ -0.48
CDK4-205ENST00000547853 ANTXR1Q9H6X2 564 aa12.07□□□□□ -0.48
CDK4-205ENST00000547853 TSPYL4Q9UJ04 414 aa12.07□□□□□ -0.48
CDK4-205ENST00000547853 GGA1Q9UJY5 639 aa12.07□□□□□ -0.48
CDK4-205ENST00000547853 FZD1Q9UP38 647 aa12.07□□□□□ -0.48
CDK4-205ENST00000547853 PCDHB15Q9Y5E8 787 aa12.07□□□□□ -0.48
CDK4-205ENST00000547853 MED23Q9ULK4 1368 aa12.06□□□□□ -0.48
CDK4-205ENST00000547853 ALPK3Q96L96 1907 aa12.06□□□□□ -0.48
CDK4-205ENST00000547853 USP17L3A6NCW0 530 aa12.06□□□□□ -0.48
CDK4-205ENST00000547853 USP17L4A6NCW7 530 aa12.06□□□□□ -0.48
CDK4-205ENST00000547853 ZBTB48P10074 688 aaPredicted RBP12.06□□□□□ -0.48
CDK4-205ENST00000547853 RPS8P62241 208 aaKnown RBP12.06□□□□□ -0.48
CDK4-205ENST00000547853 PRKG1Q13976 671 aa12.06□□□□□ -0.48
CDK4-205ENST00000547853 CHRDL2Q6WN34 429 aa12.06□□□□□ -0.48
CDK4-205ENST00000547853 USP17L1Q7RTZ2 530 aa12.06□□□□□ -0.48
CDK4-205ENST00000547853 ARMC9Q7Z3E5 817 aa12.06□□□□□ -0.48
CDK4-205ENST00000547853 WNK4Q96J92 1243 aa12.06□□□□□ -0.48
CDK4-205ENST00000547853 CHMP5Q9NZZ3 219 aa12.06□□□□□ -0.48
CDK4-205ENST00000547853 DACT2Q5SW24 774 aa12.05□□□□□ -0.48
CDK4-205ENST00000547853 APOBEC3FQ8IUX4 373 aaKnown RBP12.05□□□□□ -0.48
CDK4-205ENST00000547853 SMC5Q8IY18 1101 aa12.05□□□□□ -0.48
CDK4-205ENST00000547853 CLMNQ96JQ2 1002 aa12.05□□□□□ -0.48
CDK4-205ENST00000547853 MXD3Q9BW11 206 aa12.05□□□□□ -0.48
CDK4-205ENST00000547853 PRO3102Q9H379 93 aa12.05□□□□□ -0.48
CDK4-205ENST00000547853 EFCC1Q9HA90 598 aa12.05□□□□□ -0.48
CDK4-205ENST00000547853 SEC31BQ9NQW1 1179 aa12.05□□□□□ -0.48
CDK4-205ENST00000547853 ANKIB1Q9P2G1 1089 aa12.05□□□□□ -0.48
CDK4-205ENST00000547853 RBM27Q9P2N5 1060 aaKnown RBP12.05□□□□□ -0.48
CDK4-205ENST00000547853 ANGEL1Q9UNK9 670 aaKnown RBP12.05□□□□□ -0.48
CDK4-205ENST00000547853 XDHP47989 1333 aa12.05□□□□□ -0.48
CDK4-205ENST00000547853 G3V3G9 751 aa12.04□□□□□ -0.48
CDK4-205ENST00000547853 IRS4O14654 1257 aaPredicted RBP12.04□□□□□ -0.48
CDK4-205ENST00000547853 DCAF8Q5TAQ9 597 aa12.04□□□□□ -0.48
CDK4-205ENST00000547853 ATF7IPQ6VMQ6 1270 aa12.04□□□□□ -0.48
CDK4-205ENST00000547853 PODNQ7Z5L7 613 aa12.04□□□□□ -0.48
CDK4-205ENST00000547853 SLC17A8Q8NDX2 589 aa12.04□□□□□ -0.48
CDK4-205ENST00000547853 SMC4Q9NTJ3 1288 aa12.04□□□□□ -0.48
CDK4-205ENST00000547853 CHPF2Q9P2E5 772 aa12.04□□□□□ -0.48
CDK4-205ENST00000547853 CIZ1Q9ULV3 898 aaPredicted RBP12.04□□□□□ -0.48
CDK4-205ENST00000547853 DDX11L8A8MPP1 907 aa12.03□□□□□ -0.48
CDK4-205ENST00000547853 ATP5J2-PTCD1G3V325 749 aa12.03□□□□□ -0.48
CDK4-205ENST00000547853 RLBP1P12271 317 aa12.03□□□□□ -0.48
CDK4-205ENST00000547853 GJA5P36382 358 aa12.03□□□□□ -0.48
CDK4-205ENST00000547853 TMPOP42166 694 aaKnown RBP12.03□□□□□ -0.48
CDK4-205ENST00000547853 INHBEP58166 350 aa12.03□□□□□ -0.48
CDK4-205ENST00000547853 NEUROD2Q15784 382 aa12.03□□□□□ -0.48
CDK4-205ENST00000547853 MAP3K11Q16584 847 aa12.03□□□□□ -0.48
CDK4-205ENST00000547853 PLBD2Q8NHP8 589 aa12.03□□□□□ -0.48
CDK4-205ENST00000547853 ZBED3Q96IU2 234 aaPredicted RBP12.03□□□□□ -0.48
CDK4-205ENST00000547853 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
CDK4-205ENST00000547853 TBC1D2Q9BYX2 928 aa12.03□□□□□ -0.48
CDK4-205ENST00000547853 C22orf23Q9BZE7 217 aa12.03□□□□□ -0.48
CDK4-205ENST00000547853 BRPF3Q9ULD4 1205 aa12.03□□□□□ -0.48
CDK4-205ENST00000547853 PTCH2Q9Y6C5 1203 aa12.03□□□□□ -0.48
CDK4-205ENST00000547853 MYO3BQ8WXR4 1341 aa12.03□□□□□ -0.48
CDK4-205ENST00000547853 WTIPA6NIX2 430 aaPredicted RBP12.02□□□□□ -0.49
CDK4-205ENST00000547853 SP3Q02447 781 aa12.02□□□□□ -0.49
CDK4-205ENST00000547853 KRT24Q2M2I5 525 aa12.02□□□□□ -0.49
CDK4-205ENST00000547853 SLC9C1Q4G0N8 1177 aa12.02□□□□□ -0.49
CDK4-205ENST00000547853 HSCBQ8IWL3 235 aa12.02□□□□□ -0.49
CDK4-205ENST00000547853 SNX21Q969T3 373 aa12.02□□□□□ -0.49
CDK4-205ENST00000547853 SHISA4Q96DD7 197 aa12.02□□□□□ -0.49
CDK4-205ENST00000547853 SEC24BO95487 1268 aa12.01□□□□□ -0.49
CDK4-205ENST00000547853 OGFOD1Q8N543 542 aa12.01□□□□□ -0.49
CDK4-205ENST00000547853 ARHGAP45Q92619 1136 aa12.01□□□□□ -0.49
CDK4-205ENST00000547853 PTPN18Q99952 460 aa12.01□□□□□ -0.49
CDK4-205ENST00000547853 BABAM1Q9NWV8 329 aa12.01□□□□□ -0.49
CDK4-205ENST00000547853 MGAMO43451 1857 aa12□□□□□ -0.49
CDK4-205ENST00000547853 TESPA1A2RU30 521 aaPredicted RBP12□□□□□ -0.49
CDK4-205ENST00000547853 MCM4P33991 863 aa12□□□□□ -0.49
CDK4-205ENST00000547853 RBM25P49756 843 aaKnown RBP12□□□□□ -0.49
CDK4-205ENST00000547853 TRIM28Q13263 835 aaKnown RBP12□□□□□ -0.49
CDK4-205ENST00000547853 GOLGA6L3A6NEY3 463 aa11.99□□□□□ -0.49
CDK4-205ENST00000547853 TRIM27P14373 513 aa11.99□□□□□ -0.49
CDK4-205ENST00000547853 ATP2B4P23634 1241 aa11.99□□□□□ -0.49
CDK4-205ENST00000547853 EXOSC9Q06265 439 aaKnown RBP11.99□□□□□ -0.49
CDK4-205ENST00000547853 SLC4A8Q2Y0W8 1093 aa11.99□□□□□ -0.49
CDK4-205ENST00000547853 CCDC152Q4G0S7 254 aa11.99□□□□□ -0.49
CDK4-205ENST00000547853 STRIP1Q5VSL9 837 aa11.99□□□□□ -0.49
CDK4-205ENST00000547853 ANKRD13DQ6ZTN6 518 aa11.99□□□□□ -0.49
CDK4-205ENST00000547853 ZBTB38Q8NAP3 1195 aaPredicted RBP11.99□□□□□ -0.49
CDK4-205ENST00000547853 SLC10A4Q96EP9 437 aa11.99□□□□□ -0.49
CDK4-205ENST00000547853 DEFB129Q9H1M3 183 aa11.99□□□□□ -0.49
CDK4-205ENST00000547853 ZNF804BA4D1E1 1349 aa11.98□□□□□ -0.49
CDK4-205ENST00000547853 UNCXA6NJT0 531 aa11.98□□□□□ -0.49
CDK4-205ENST00000547853 SOX1O00570 391 aaPredicted RBP11.98□□□□□ -0.49
CDK4-205ENST00000547853 MYCP01106 439 aaPredicted RBP11.98□□□□□ -0.49
CDK4-205ENST00000547853 MNX1P50219 401 aaPredicted RBP11.98□□□□□ -0.49
CDK4-205ENST00000547853 NUCB1Q02818 461 aa11.98□□□□□ -0.49
CDK4-205ENST00000547853 LMOD3Q0VAK6 560 aa11.98□□□□□ -0.49
CDK4-205ENST00000547853 SKOR2Q2VWA4 1001 aaPredicted RBP11.98□□□□□ -0.49
CDK4-205ENST00000547853 UBE2Q1Q7Z7E8 422 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms