RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-204ENST00000547310 ALKBH8Q96BT7 664 aaKnown RBP8.17□□□□□ -1.1
LGR5-204ENST00000547310 DMRTB1Q96MA1 342 aa8.17□□□□□ -1.1
LGR5-204ENST00000547310 AGGF1Q8N302 714 aaeCLIP8.16□□□□□ -1.1
LGR5-204ENST00000547310 SNX29Q8TEQ0 813 aa8.16□□□□□ -1.1
LGR5-204ENST00000547310 CEP41Q9BYV8 373 aa8.16□□□□□ -1.1
LGR5-204ENST00000547310 LOC102724428A0A0B4J2F2 783 aa8.15□□□□□ -1.1
LGR5-204ENST00000547310 A6NHS1 94 aa8.15□□□□□ -1.1
LGR5-204ENST00000547310 SIK1P57059 783 aa8.15□□□□□ -1.1
LGR5-204ENST00000547310 CHRDQ9H2X0 955 aa8.15□□□□□ -1.1
LGR5-204ENST00000547310 CNTN3Q9P232 1028 aa8.15□□□□□ -1.1
LGR5-204ENST00000547310 HMX2A2RU54 273 aa8.14□□□□□ -1.11
LGR5-204ENST00000547310 NEFLP07196 543 aa8.14□□□□□ -1.11
LGR5-204ENST00000547310 HYAL2Q12891 473 aa8.14□□□□□ -1.11
LGR5-204ENST00000547310 SETDB1Q15047 1291 aa8.14□□□□□ -1.11
LGR5-204ENST00000547310 CLEC10AQ8IUN9 316 aa8.14□□□□□ -1.11
LGR5-204ENST00000547310 C1orf127Q8N9H9 656 aa8.14□□□□□ -1.11
LGR5-204ENST00000547310 SMG9Q9H0W8 520 aaKnown RBP8.14□□□□□ -1.11
LGR5-204ENST00000547310 TMC7Q7Z402 723 aa8.13□□□□□ -1.11
LGR5-204ENST00000547310 SHKBP1Q8TBC3 707 aa8.13□□□□□ -1.11
LGR5-204ENST00000547310 FAM46AQ96IP4 442 aaKnown RBP8.13□□□□□ -1.11
LGR5-204ENST00000547310 FAM83CQ9BQN1 747 aa8.13□□□□□ -1.11
LGR5-204ENST00000547310 SALL4Q9UJQ4 1053 aa8.13□□□□□ -1.11
LGR5-204ENST00000547310 GPR182O15218 404 aa8.12□□□□□ -1.11
LGR5-204ENST00000547310 MAPK1P28482 360 aa8.12□□□□□ -1.11
LGR5-204ENST00000547310 KRTAP19-4Q3LI73 84 aa8.12□□□□□ -1.11
LGR5-204ENST00000547310 CEP120Q8N960 986 aa8.12□□□□□ -1.11
LGR5-204ENST00000547310 UTP4Q969X6 686 aaKnown RBP8.12□□□□□ -1.11
LGR5-204ENST00000547310 FBXL18Q96ME1 805 aa8.12□□□□□ -1.11
LGR5-204ENST00000547310 ASB16Q96NS5 453 aa8.12□□□□□ -1.11
LGR5-204ENST00000547310 ZFYVE28Q9HCC9 887 aa8.12□□□□□ -1.11
LGR5-204ENST00000547310 ANGEL1Q9UNK9 670 aaKnown RBP8.12□□□□□ -1.11
LGR5-204ENST00000547310 ZBTB7CA1YPR0 619 aa8.11□□□□□ -1.11
LGR5-204ENST00000547310 TREHO43280 583 aa8.11□□□□□ -1.11
LGR5-204ENST00000547310 PHACTR2O75167 634 aa8.11□□□□□ -1.11
LGR5-204ENST00000547310 CYP2E1P05181 493 aaPredicted RBP8.11□□□□□ -1.11
LGR5-204ENST00000547310 CES1P23141 567 aa8.11□□□□□ -1.11
LGR5-204ENST00000547310 DSC3Q14574 896 aa8.11□□□□□ -1.11
LGR5-204ENST00000547310 COL13A1Q5TAT6 717 aaPredicted RBP8.11□□□□□ -1.11
LGR5-204ENST00000547310 ZSCAN29Q8IWY8 852 aaPredicted RBP8.11□□□□□ -1.11
LGR5-204ENST00000547310 MYRFLQ96LU7 910 aa8.11□□□□□ -1.11
LGR5-204ENST00000547310 DNAJC25Q9H1X3 360 aa8.11□□□□□ -1.11
LGR5-204ENST00000547310 PRNPP04156 253 aa8.1□□□□□ -1.11
LGR5-204ENST00000547310 NSUN5Q96P11 429 aaKnown RBP8.1□□□□□ -1.11
LGR5-204ENST00000547310 GZF1Q9H116 711 aaPredicted RBP8.1□□□□□ -1.11
LGR5-204ENST00000547310 RBSNQ9H1K0 784 aa8.1□□□□□ -1.11
LGR5-204ENST00000547310 CCDC39Q9UFE4 941 aa8.1□□□□□ -1.11
LGR5-204ENST00000547310 FOXD3Q9UJU5 478 aaPredicted RBP8.1□□□□□ -1.11
LGR5-204ENST00000547310 GHRHP01286 108 aa8.09□□□□□ -1.11
LGR5-204ENST00000547310 HOXA10P31260 410 aaPredicted RBP8.09□□□□□ -1.11
LGR5-204ENST00000547310 MLLT1Q03111 559 aaPredicted RBP8.09□□□□□ -1.11
LGR5-204ENST00000547310 CACTIN-AS1Q8N1I8 211 aa8.09□□□□□ -1.11
LGR5-204ENST00000547310 TMC1Q8TDI8 760 aa8.09□□□□□ -1.11
LGR5-204ENST00000547310 SPACA7Q96KW9 195 aa8.09□□□□□ -1.11
LGR5-204ENST00000547310 PIM2Q9P1W9 311 aa8.09□□□□□ -1.11
LGR5-204ENST00000547310 AMOTL2Q9Y2J4 779 aa8.09□□□□□ -1.11
LGR5-204ENST00000547310 J3QW42 95 aa8.08□□□□□ -1.12
LGR5-204ENST00000547310 EREGO14944 169 aa8.08□□□□□ -1.12
LGR5-204ENST00000547310 EDN3P14138 238 aa8.08□□□□□ -1.12
LGR5-204ENST00000547310 ZNF648Q5T619 568 aaPredicted RBP8.08□□□□□ -1.12
LGR5-204ENST00000547310 HFE2Q6ZVN8 426 aa8.08□□□□□ -1.12
LGR5-204ENST00000547310 NCAPG2Q86XI2 1143 aa8.08□□□□□ -1.12
LGR5-204ENST00000547310 IL22RA1Q8N6P7 574 aa8.08□□□□□ -1.12
LGR5-204ENST00000547310 PLD4Q96BZ4 506 aa8.08□□□□□ -1.12
LGR5-204ENST00000547310 NIF3L1Q9GZT8 377 aa8.08□□□□□ -1.12
LGR5-204ENST00000547310 CPNE3O75131 537 aaKnown RBP8.07□□□□□ -1.12
LGR5-204ENST00000547310 EIF2AK2P19525 551 aaKnown RBP8.07□□□□□ -1.12
LGR5-204ENST00000547310 COL19A1Q14993 1142 aa8.07□□□□□ -1.12
LGR5-204ENST00000547310 MSMPQ1L6U9 139 aa8.07□□□□□ -1.12
LGR5-204ENST00000547310 GALNT12Q8IXK2 581 aa8.07□□□□□ -1.12
LGR5-204ENST00000547310 PBX4Q9BYU1 374 aa8.07□□□□□ -1.12
LGR5-204ENST00000547310 MUC3BQ9H195 1237 aa8.07□□□□□ -1.12
LGR5-204ENST00000547310 NFKBIEO00221 500 aa8.06□□□□□ -1.12
LGR5-204ENST00000547310 PLCB3Q01970 1234 aa8.06□□□□□ -1.12
LGR5-204ENST00000547310 FMR1Q06787 632 aaKnown RBP eCLIP8.06□□□□□ -1.12
LGR5-204ENST00000547310 ZNF124Q15973 351 aa8.06□□□□□ -1.12
LGR5-204ENST00000547310 DNAJC14Q6Y2X3 702 aaPredicted RBP8.06□□□□□ -1.12
LGR5-204ENST00000547310 NFXL1Q6ZNB6 911 aa8.06□□□□□ -1.12
LGR5-204ENST00000547310 FAM20CQ8IXL6 584 aa8.06□□□□□ -1.12
LGR5-204ENST00000547310 CSRNP1Q96S65 589 aa8.06□□□□□ -1.12
LGR5-204ENST00000547310 DZANK1Q9NVP4 752 aa8.06□□□□□ -1.12
LGR5-204ENST00000547310 KANSL3Q9P2N6 904 aa8.06□□□□□ -1.12
LGR5-204ENST00000547310 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.06□□□□□ -1.12
LGR5-204ENST00000547310 EIF1AYO14602 144 aaKnown RBP8.05□□□□□ -1.12
LGR5-204ENST00000547310 ERCC3P19447 782 aa8.05□□□□□ -1.12
LGR5-204ENST00000547310 ORC1Q13415 861 aa8.05□□□□□ -1.12
LGR5-204ENST00000547310 WDR64B1ANS9 1081 aa8.04□□□□□ -1.12
LGR5-204ENST00000547310 SMNDC1O75940 238 aaKnown RBP eCLIP8.04□□□□□ -1.12
LGR5-204ENST00000547310 ENOX2Q16206 610 aaKnown RBP8.04□□□□□ -1.12
LGR5-204ENST00000547310 CCDC27Q2M243 656 aa8.04□□□□□ -1.12
LGR5-204ENST00000547310 PEAR1Q5VY43 1037 aaPredicted RBP8.04□□□□□ -1.12
LGR5-204ENST00000547310 VSIG10LQ86VR7 867 aa8.04□□□□□ -1.12
LGR5-204ENST00000547310 TMEM102Q8N9M5 508 aaPredicted RBP8.04□□□□□ -1.12
LGR5-204ENST00000547310 RASSF4Q9H2L5 321 aa8.04□□□□□ -1.12
LGR5-204ENST00000547310 ATP11AP98196 1134 aa8.03□□□□□ -1.12
LGR5-204ENST00000547310 KIAA0319Q5VV43 1072 aa8.03□□□□□ -1.12
LGR5-204ENST00000547310 TP53INP2Q8IXH6 220 aa8.03□□□□□ -1.12
LGR5-204ENST00000547310 KRTAP9-3Q9BYQ3 159 aa8.03□□□□□ -1.12
LGR5-204ENST00000547310 FOSL1P15407 271 aa8.02□□□□□ -1.13
LGR5-204ENST00000547310 CPSF6Q16630 551 aaKnown RBP eCLIP8.02□□□□□ -1.13
LGR5-204ENST00000547310 USPL1Q5W0Q7 1092 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms