RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 MED23Q9ULK4 1368 aa15.02■□□□□ -0
HDAC7-226ENST00000547259 TRPA1O75762 1119 aa15.02■□□□□ -0
HDAC7-226ENST00000547259 IGHMBP2P38935 993 aaKnown RBP15.02■□□□□ -0
HDAC7-226ENST00000547259 AAMPQ13685 434 aa15.02■□□□□ -0
HDAC7-226ENST00000547259 ZIC5Q96T25 663 aa15.02■□□□□ -0
HDAC7-226ENST00000547259 GMLQ99445 158 aa15.02■□□□□ -0
HDAC7-226ENST00000547259 PLA2G12BQ9BX93 195 aa15.02■□□□□ -0
HDAC7-226ENST00000547259 BICC1Q9H694 974 aaKnown RBP15.02■□□□□ -0
HDAC7-226ENST00000547259 LEMD3Q9Y2U8 911 aa15.02■□□□□ -0
HDAC7-226ENST00000547259 PAPPA2Q9BXP8 1791 aa15.01□□□□□ -0.01
HDAC7-226ENST00000547259 EPHA10Q5JZY3 1008 aa15.01□□□□□ -0.01
HDAC7-226ENST00000547259 STRIP1Q5VSL9 837 aa15.01□□□□□ -0.01
HDAC7-226ENST00000547259 TTLL11Q8NHH1 800 aa15.01□□□□□ -0.01
HDAC7-226ENST00000547259 KAZALD1Q96I82 304 aa15.01□□□□□ -0.01
HDAC7-226ENST00000547259 CCDC85AQ96PX6 553 aaPredicted RBP15.01□□□□□ -0.01
HDAC7-226ENST00000547259 CSRNP1Q96S65 589 aa15.01□□□□□ -0.01
HDAC7-226ENST00000547259 ANKRD2Q9GZV1 360 aa15.01□□□□□ -0.01
HDAC7-226ENST00000547259 COA1Q9GZY4 146 aa15.01□□□□□ -0.01
HDAC7-226ENST00000547259 MINPP1Q9UNW1 487 aa15.01□□□□□ -0.01
HDAC7-226ENST00000547259 CHMP3Q9Y3E7 222 aa15.01□□□□□ -0.01
HDAC7-226ENST00000547259 FOXO4P98177 505 aa15□□□□□ -0.01
HDAC7-226ENST00000547259 PKN2Q16513 984 aaKnown RBP15□□□□□ -0.01
HDAC7-226ENST00000547259 DLK2Q6UY11 383 aa15□□□□□ -0.01
HDAC7-226ENST00000547259 HDAC9Q9UKV0 1011 aa15□□□□□ -0.01
HDAC7-226ENST00000547259 COL4A1P02462 1669 aa15□□□□□ -0.01
HDAC7-226ENST00000547259 LMBR1LQ6UX01 489 aa14.99□□□□□ -0.01
HDAC7-226ENST00000547259 CTU1Q7Z7A3 348 aaKnown RBP14.99□□□□□ -0.01
HDAC7-226ENST00000547259 RASAL3Q86YV0 1011 aa14.99□□□□□ -0.01
HDAC7-226ENST00000547259 ANKRD44Q8N8A2 993 aa14.99□□□□□ -0.01
HDAC7-226ENST00000547259 MPHOSPH8Q99549 860 aa14.99□□□□□ -0.01
HDAC7-226ENST00000547259 SLC34A2O95436 690 aa14.98□□□□□ -0.01
HDAC7-226ENST00000547259 TTLL12Q14166 644 aaPredicted RBP14.98□□□□□ -0.01
HDAC7-226ENST00000547259 RABL6Q3YEC7 729 aaPredicted RBP14.98□□□□□ -0.01
HDAC7-226ENST00000547259 CEP85Q6P2H3 762 aa14.98□□□□□ -0.01
HDAC7-226ENST00000547259 APOBEC3FQ8IUX4 373 aaKnown RBP14.98□□□□□ -0.01
HDAC7-226ENST00000547259 GREM2Q9H772 168 aa14.98□□□□□ -0.01
HDAC7-226ENST00000547259 ASTN2O75129 1339 aaPredicted RBP14.97□□□□□ -0.01
HDAC7-226ENST00000547259 NOM1Q5C9Z4 860 aaKnown RBP14.97□□□□□ -0.01
HDAC7-226ENST00000547259 DACT2Q5SW24 774 aa14.97□□□□□ -0.01
HDAC7-226ENST00000547259 TTLL5Q6EMB2 1281 aa14.97□□□□□ -0.01
HDAC7-226ENST00000547259 ARMC9Q7Z3E5 817 aa14.97□□□□□ -0.01
HDAC7-226ENST00000547259 RPAP2Q8IXW5 612 aaPredicted RBP14.97□□□□□ -0.01
HDAC7-226ENST00000547259 ZNF804BA4D1E1 1349 aa14.96□□□□□ -0.01
HDAC7-226ENST00000547259 A0A1B0GUL6 1792 aa14.96□□□□□ -0.01
HDAC7-226ENST00000547259 WNT10BO00744 389 aa14.96□□□□□ -0.01
HDAC7-226ENST00000547259 SRGAP3O43295 1099 aa14.96□□□□□ -0.01
HDAC7-226ENST00000547259 HMMRO75330 724 aa14.96□□□□□ -0.01
HDAC7-226ENST00000547259 CSF1RP07333 972 aa14.96□□□□□ -0.01
HDAC7-226ENST00000547259 KCNJ4P48050 445 aa14.96□□□□□ -0.01
HDAC7-226ENST00000547259 SREBF2Q12772 1141 aa14.96□□□□□ -0.01
HDAC7-226ENST00000547259 MTX1Q13505 466 aa14.96□□□□□ -0.01
HDAC7-226ENST00000547259 ERICH6BQ5W0A0 696 aa14.96□□□□□ -0.01
HDAC7-226ENST00000547259 FBXW7Q969H0 707 aa14.96□□□□□ -0.01
HDAC7-226ENST00000547259 PCDHB15Q9Y5E8 787 aa14.96□□□□□ -0.01
HDAC7-226ENST00000547259 PNMA6EA0A0J9YXQ4 647 aa14.95□□□□□ -0.02
HDAC7-226ENST00000547259 TM4SF4P48230 202 aa14.95□□□□□ -0.02
HDAC7-226ENST00000547259 ATP8B2P98198 1209 aa14.95□□□□□ -0.02
HDAC7-226ENST00000547259 CCDC57Q2TAC2 916 aa14.95□□□□□ -0.02
HDAC7-226ENST00000547259 NBPF9Q3BBW0 867 aa14.95□□□□□ -0.02
HDAC7-226ENST00000547259 ANKRD18BA2A2Z9 1011 aa14.94□□□□□ -0.02
HDAC7-226ENST00000547259 UBE2Q2LH0YL09 131 aa14.94□□□□□ -0.02
HDAC7-226ENST00000547259 TNRC18O15417 2968 aaPredicted RBP14.94□□□□□ -0.02
HDAC7-226ENST00000547259 ITGA6P23229 1130 aa14.94□□□□□ -0.02
HDAC7-226ENST00000547259 INHBEP58166 350 aa14.94□□□□□ -0.02
HDAC7-226ENST00000547259 IFIT5Q13325 482 aaKnown RBP14.94□□□□□ -0.02
HDAC7-226ENST00000547259 TAF7LQ5H9L4 462 aa14.94□□□□□ -0.02
HDAC7-226ENST00000547259 UNCXA6NJT0 531 aa14.93□□□□□ -0.02
HDAC7-226ENST00000547259 ALDH1A1P00352 501 aa14.93□□□□□ -0.02
HDAC7-226ENST00000547259 COL1A1P02452 1464 aaPredicted RBP14.93□□□□□ -0.02
HDAC7-226ENST00000547259 MYO1BO43795 1136 aa14.92□□□□□ -0.02
HDAC7-226ENST00000547259 POLA2Q14181 598 aa14.92□□□□□ -0.02
HDAC7-226ENST00000547259 SIRT2Q8IXJ6 389 aa14.92□□□□□ -0.02
HDAC7-226ENST00000547259 SSH3Q8TE77 659 aa14.92□□□□□ -0.02
HDAC7-226ENST00000547259 CFHR5Q9BXR6 569 aa14.92□□□□□ -0.02
HDAC7-226ENST00000547259 PCDH10Q9P2E7 1040 aa14.92□□□□□ -0.02
HDAC7-226ENST00000547259 PPP2R3BQ9Y5P8 575 aa14.92□□□□□ -0.02
HDAC7-226ENST00000547259 PPP1R12BO60237 982 aaPredicted RBP14.91□□□□□ -0.02
HDAC7-226ENST00000547259 RFX5P48382 616 aaPredicted RBP14.91□□□□□ -0.02
HDAC7-226ENST00000547259 GTF2IP78347 998 aa14.91□□□□□ -0.02
HDAC7-226ENST00000547259 DLGAP5Q15398 846 aa14.91□□□□□ -0.02
HDAC7-226ENST00000547259 C15orf52Q6ZUT6 534 aaKnown RBP14.91□□□□□ -0.02
HDAC7-226ENST00000547259 KIAA0825Q8IV33 1275 aa14.91□□□□□ -0.02
HDAC7-226ENST00000547259 MTMR14Q8NCE2 650 aa14.91□□□□□ -0.02
HDAC7-226ENST00000547259 KLHDC4Q8TBB5 520 aa14.91□□□□□ -0.02
HDAC7-226ENST00000547259 ZNF594Q96JF6 807 aaPredicted RBP14.91□□□□□ -0.02
HDAC7-226ENST00000547259 RWDD1Q9H446 243 aaPredicted RBP14.91□□□□□ -0.02
HDAC7-226ENST00000547259 FKBP1AP62942 108 aaKnown RBP14.9□□□□□ -0.02
HDAC7-226ENST00000547259 CHRNDQ07001 517 aa14.9□□□□□ -0.02
HDAC7-226ENST00000547259 HDAC1Q13547 482 aaPredicted RBP14.9□□□□□ -0.02
HDAC7-226ENST00000547259 SUPT20HL1Q3ZLR7 823 aa14.9□□□□□ -0.02
HDAC7-226ENST00000547259 ZNF804AQ7Z570 1209 aa14.9□□□□□ -0.02
HDAC7-226ENST00000547259 ZNF296Q8WUU4 475 aaPredicted RBP14.9□□□□□ -0.02
HDAC7-226ENST00000547259 CCDC136Q96JN2 1154 aa14.9□□□□□ -0.02
HDAC7-226ENST00000547259 SIL1Q9H173 461 aa14.9□□□□□ -0.02
HDAC7-226ENST00000547259 CD209Q9NNX6 404 aa14.9□□□□□ -0.02
HDAC7-226ENST00000547259 PPP4R2Q9NY27 417 aa14.9□□□□□ -0.02
HDAC7-226ENST00000547259 PA2G4Q9UQ80 394 aaKnown RBP14.9□□□□□ -0.02
HDAC7-226ENST00000547259 MANSC4A6NHS7 340 aaPredicted RBP14.89□□□□□ -0.03
HDAC7-226ENST00000547259 GPR25O00155 361 aa14.89□□□□□ -0.03
HDAC7-226ENST00000547259 SURF6O75683 361 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms