RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 WNT10BO00744 389 aa16.82■□□□□ 0.28
RAB5B-203ENST00000546810 TRIM27P14373 513 aa16.82■□□□□ 0.28
RAB5B-203ENST00000546810 LDLRAD1Q5T700 205 aa16.82■□□□□ 0.28
RAB5B-203ENST00000546810 PODNQ7Z5L7 613 aa16.82■□□□□ 0.28
RAB5B-203ENST00000546810 FTSJ3Q8IY81 847 aaKnown RBP16.82■□□□□ 0.28
RAB5B-203ENST00000546810 SEC31BQ9NQW1 1179 aa16.82■□□□□ 0.28
RAB5B-203ENST00000546810 RBBP6Q7Z6E9 1792 aaKnown RBP16.82■□□□□ 0.28
RAB5B-203ENST00000546810 GRM8O00222 908 aa16.81■□□□□ 0.28
RAB5B-203ENST00000546810 PDE8AO60658 829 aa16.81■□□□□ 0.28
RAB5B-203ENST00000546810 UBE3BQ7Z3V4 1068 aa16.81■□□□□ 0.28
RAB5B-203ENST00000546810 OGFOD1Q8N543 542 aa16.81■□□□□ 0.28
RAB5B-203ENST00000546810 TMEM106CQ9BVX2 250 aa16.81■□□□□ 0.28
RAB5B-203ENST00000546810 ANGEL1Q9UNK9 670 aaKnown RBP16.81■□□□□ 0.28
RAB5B-203ENST00000546810 CD99L2Q8TCZ2 262 aa16.8■□□□□ 0.28
RAB5B-203ENST00000546810 PSME4Q14997 1843 aa16.8■□□□□ 0.28
RAB5B-203ENST00000546810 XDHP47989 1333 aa16.79■□□□□ 0.28
RAB5B-203ENST00000546810 IGF2BP3O00425 579 aaKnown RBP eCLIP16.79■□□□□ 0.28
RAB5B-203ENST00000546810 ATP2B4P23634 1241 aa16.79■□□□□ 0.28
RAB5B-203ENST00000546810 DZIP1LQ8IYY4 767 aaKnown RBP16.79■□□□□ 0.28
RAB5B-203ENST00000546810 JARID2Q92833 1246 aaPredicted RBP16.79■□□□□ 0.28
RAB5B-203ENST00000546810 SLC10A4Q96EP9 437 aa16.79■□□□□ 0.28
RAB5B-203ENST00000546810 MXD3Q9BW11 206 aa16.79■□□□□ 0.28
RAB5B-203ENST00000546810 EFCC1Q9HA90 598 aa16.79■□□□□ 0.28
RAB5B-203ENST00000546810 HDAC5Q9UQL6 1122 aa16.79■□□□□ 0.28
RAB5B-203ENST00000546810 KIAA0100Q14667 2235 aaKnown RBP16.79■□□□□ 0.28
RAB5B-203ENST00000546810 DLL1O00548 723 aa16.78■□□□□ 0.28
RAB5B-203ENST00000546810 SASH1O94885 1247 aa16.78■□□□□ 0.28
RAB5B-203ENST00000546810 CCDC152Q4G0S7 254 aa16.78■□□□□ 0.28
RAB5B-203ENST00000546810 DACT2Q5SW24 774 aa16.78■□□□□ 0.28
RAB5B-203ENST00000546810 APOBEC3FQ8IUX4 373 aaKnown RBP16.78■□□□□ 0.28
RAB5B-203ENST00000546810 CLUAP1Q96AJ1 413 aa16.78■□□□□ 0.28
RAB5B-203ENST00000546810 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.78■□□□□ 0.28
RAB5B-203ENST00000546810 MYO3BQ8WXR4 1341 aa16.77■□□□□ 0.28
RAB5B-203ENST00000546810 ZBTB48P10074 688 aaPredicted RBP16.77■□□□□ 0.28
RAB5B-203ENST00000546810 FBXW7Q969H0 707 aa16.77■□□□□ 0.28
RAB5B-203ENST00000546810 OTUD5Q96G74 571 aa16.77■□□□□ 0.28
RAB5B-203ENST00000546810 WNK4Q96J92 1243 aa16.77■□□□□ 0.28
RAB5B-203ENST00000546810 PLA2G12BQ9BX93 195 aa16.77■□□□□ 0.28
RAB5B-203ENST00000546810 FZD1Q9UP38 647 aa16.77■□□□□ 0.28
RAB5B-203ENST00000546810 UTYO14607 1347 aa16.76■□□□□ 0.27
RAB5B-203ENST00000546810 H0YGN5 161 aa16.76■□□□□ 0.27
RAB5B-203ENST00000546810 CASP7P55210 303 aa16.76■□□□□ 0.27
RAB5B-203ENST00000546810 CTSWP56202 376 aa16.76■□□□□ 0.27
RAB5B-203ENST00000546810 CRHR2Q13324 411 aa16.76■□□□□ 0.27
RAB5B-203ENST00000546810 OTUD7BQ6GQQ9 843 aa16.76■□□□□ 0.27
RAB5B-203ENST00000546810 ZNF333Q96JL9 665 aa16.76■□□□□ 0.27
RAB5B-203ENST00000546810 MMP14P50281 582 aa16.75■□□□□ 0.27
RAB5B-203ENST00000546810 SP3Q02447 781 aa16.75■□□□□ 0.27
RAB5B-203ENST00000546810 MAP3K11Q16584 847 aa16.75■□□□□ 0.27
RAB5B-203ENST00000546810 STRIP1Q5VSL9 837 aa16.75■□□□□ 0.27
RAB5B-203ENST00000546810 ANKRD18AQ8IVF6 992 aa16.75■□□□□ 0.27
RAB5B-203ENST00000546810 USP44Q9H0E7 712 aa16.75■□□□□ 0.27
RAB5B-203ENST00000546810 CENPFP49454 3210 aa16.75■□□□□ 0.27
RAB5B-203ENST00000546810 BRCA2P51587 3418 aa16.74■□□□□ 0.27
RAB5B-203ENST00000546810 GNAI3P08754 354 aa16.74■□□□□ 0.27
RAB5B-203ENST00000546810 NBPF7P0C2Y1 421 aaPredicted RBP16.74■□□□□ 0.27
RAB5B-203ENST00000546810 UBTFL1P0CB47 393 aaPredicted RBP16.74■□□□□ 0.27
RAB5B-203ENST00000546810 SLC4A8Q2Y0W8 1093 aa16.74■□□□□ 0.27
RAB5B-203ENST00000546810 CHRDL2Q6WN34 429 aa16.74■□□□□ 0.27
RAB5B-203ENST00000546810 NBPF11Q86T75 865 aa16.74■□□□□ 0.27
RAB5B-203ENST00000546810 TMEM57Q8N5G2 664 aa16.74■□□□□ 0.27
RAB5B-203ENST00000546810 SLC17A8Q8NDX2 589 aa16.74■□□□□ 0.27
RAB5B-203ENST00000546810 CLMNQ96JQ2 1002 aa16.74■□□□□ 0.27
RAB5B-203ENST00000546810 CCDC85AQ96PX6 553 aaPredicted RBP16.74■□□□□ 0.27
RAB5B-203ENST00000546810 TNNQ9UQP3 1299 aa16.74■□□□□ 0.27
RAB5B-203ENST00000546810 MED23Q9ULK4 1368 aa16.74■□□□□ 0.27
RAB5B-203ENST00000546810 WTIPA6NIX2 430 aaPredicted RBP16.73■□□□□ 0.27
RAB5B-203ENST00000546810 CAP1Q01518 475 aa16.73■□□□□ 0.27
RAB5B-203ENST00000546810 SLC9C1Q4G0N8 1177 aa16.73■□□□□ 0.27
RAB5B-203ENST00000546810 ITPRIPQ8IWB1 547 aa16.73■□□□□ 0.27
RAB5B-203ENST00000546810 TTLL11Q8NHH1 800 aa16.73■□□□□ 0.27
RAB5B-203ENST00000546810 TRIOBPQ9H2D6 2365 aa16.73■□□□□ 0.27
RAB5B-203ENST00000546810 COL1A1P02452 1464 aaPredicted RBP16.73■□□□□ 0.27
RAB5B-203ENST00000546810 PPP1R12BO60237 982 aaPredicted RBP16.72■□□□□ 0.27
RAB5B-203ENST00000546810 PLIN1O60240 522 aa16.72■□□□□ 0.27
RAB5B-203ENST00000546810 PDE3AQ14432 1141 aa16.72■□□□□ 0.27
RAB5B-203ENST00000546810 SUCLG2Q96I99 432 aa16.72■□□□□ 0.27
RAB5B-203ENST00000546810 ZBED3Q96IU2 234 aaPredicted RBP16.72■□□□□ 0.27
RAB5B-203ENST00000546810 CDC5LQ99459 802 aaKnown RBP16.72■□□□□ 0.27
RAB5B-203ENST00000546810 COA1Q9GZY4 146 aa16.72■□□□□ 0.27
RAB5B-203ENST00000546810 DEFB129Q9H1M3 183 aa16.72■□□□□ 0.27
RAB5B-203ENST00000546810 CHMP4BQ9H444 224 aaKnown RBP16.72■□□□□ 0.27
RAB5B-203ENST00000546810 CHMP3Q9Y3E7 222 aa16.72■□□□□ 0.27
RAB5B-203ENST00000546810 UNCXA6NJT0 531 aa16.71■□□□□ 0.27
RAB5B-203ENST00000546810 CSF1RP07333 972 aa16.71■□□□□ 0.27
RAB5B-203ENST00000546810 FOXO4P98177 505 aa16.71■□□□□ 0.27
RAB5B-203ENST00000546810 KIAA0825Q8IV33 1275 aa16.71■□□□□ 0.27
RAB5B-203ENST00000546810 PTCH2Q9Y6C5 1203 aa16.71■□□□□ 0.27
RAB5B-203ENST00000546810 SZT2Q5T011 3432 aa16.7■□□□□ 0.26
RAB5B-203ENST00000546810 RRP1P56182 461 aaKnown RBP16.7■□□□□ 0.26
RAB5B-203ENST00000546810 ARHGEF6Q15052 776 aa16.7■□□□□ 0.26
RAB5B-203ENST00000546810 CCDC57Q2TAC2 916 aa16.7■□□□□ 0.26
RAB5B-203ENST00000546810 LMBR1LQ6UX01 489 aa16.7■□□□□ 0.26
RAB5B-203ENST00000546810 PANK1Q8TE04 598 aa16.7■□□□□ 0.26
RAB5B-203ENST00000546810 MEIS3Q99687 375 aa16.7■□□□□ 0.26
RAB5B-203ENST00000546810 PTPN18Q99952 460 aa16.7■□□□□ 0.26
RAB5B-203ENST00000546810 RBM27Q9P2N5 1060 aaKnown RBP16.7■□□□□ 0.26
RAB5B-203ENST00000546810 SSC5DA1L4H1 1573 aa16.69■□□□□ 0.26
RAB5B-203ENST00000546810 ANKRD18BA2A2Z9 1011 aa16.69■□□□□ 0.26
RAB5B-203ENST00000546810 TESPA1A2RU30 521 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms