RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 KAT14Q9H8E8 782 aa11.77□□□□□ -0.53
SOD2-216ENST00000546260 C9orf78Q9NZ63 289 aaPredicted RBP11.77□□□□□ -0.53
SOD2-216ENST00000546260 EIF4E1BA6NMX2 242 aaKnown RBP11.77□□□□□ -0.53
SOD2-216ENST00000546260 SYKP43405 635 aa11.77□□□□□ -0.53
SOD2-216ENST00000546260 AACSQ86V21 672 aa11.77□□□□□ -0.53
SOD2-216ENST00000546260 POLD4Q9HCU8 107 aa11.77□□□□□ -0.53
SOD2-216ENST00000546260 PPANQ9NQ55 473 aaKnown RBP11.77□□□□□ -0.53
SOD2-216ENST00000546260 KIAA1468Q9P260 1216 aa11.77□□□□□ -0.53
SOD2-216ENST00000546260 CFAP74Q9C0B2 1584 aa11.77□□□□□ -0.53
SOD2-216ENST00000546260 TROQ12816 1431 aaPredicted RBP11.77□□□□□ -0.53
SOD2-216ENST00000546260 ENOX2Q16206 610 aaKnown RBP11.77□□□□□ -0.53
SOD2-216ENST00000546260 DHX40Q8IX18 779 aaKnown RBP11.77□□□□□ -0.53
SOD2-216ENST00000546260 JMYQ8N9B5 988 aa11.77□□□□□ -0.53
SOD2-216ENST00000546260 DACH1Q9UI36 760 aa11.77□□□□□ -0.53
SOD2-216ENST00000546260 KDM5DQ9BY66 1539 aa11.76□□□□□ -0.53
SOD2-216ENST00000546260 ARHGAP31Q2M1Z3 1444 aa11.76□□□□□ -0.53
SOD2-216ENST00000546260 USP28Q96RU2 1077 aa11.76□□□□□ -0.53
SOD2-216ENST00000546260 AKR1B15C9JRZ8 316 aaPredicted RBP11.76□□□□□ -0.53
SOD2-216ENST00000546260 CUTAO60888 179 aa11.76□□□□□ -0.53
SOD2-216ENST00000546260 AP1G2O75843 785 aa11.76□□□□□ -0.53
SOD2-216ENST00000546260 TRIM29Q14134 588 aa11.76□□□□□ -0.53
SOD2-216ENST00000546260 CCDC93Q567U6 631 aa11.76□□□□□ -0.53
SOD2-216ENST00000546260 TOGARAM2Q6ZUX3 1019 aa11.76□□□□□ -0.53
SOD2-216ENST00000546260 GRIN2AQ12879 1464 aa11.76□□□□□ -0.53
SOD2-216ENST00000546260 GGCXP38435 758 aa11.76□□□□□ -0.53
SOD2-216ENST00000546260 MAP3K9P80192 1104 aa11.76□□□□□ -0.53
SOD2-216ENST00000546260 G3BP1Q13283 466 aaKnown RBP eCLIP11.76□□□□□ -0.532e-10■□□□□ 8.7
SOD2-216ENST00000546260 NBPF6Q5VWK0 638 aa11.76□□□□□ -0.53
SOD2-216ENST00000546260 NBPF5PQ86XG9 351 aaPredicted RBP11.76□□□□□ -0.53
SOD2-216ENST00000546260 SLC35F6Q8N357 371 aa11.76□□□□□ -0.53
SOD2-216ENST00000546260 NBPF4Q96M43 638 aa11.76□□□□□ -0.53
SOD2-216ENST00000546260 BOLA2Q9H3K6 86 aa11.76□□□□□ -0.53
SOD2-216ENST00000546260 HIP1O00291 1037 aa11.75□□□□□ -0.53
SOD2-216ENST00000546260 SLC8A1P32418 973 aa11.75□□□□□ -0.53
SOD2-216ENST00000546260 RANBP1P43487 201 aa11.75□□□□□ -0.53
SOD2-216ENST00000546260 NLRP12P59046 1061 aa11.75□□□□□ -0.53
SOD2-216ENST00000546260 RHPN1Q8TCX5 695 aa11.75□□□□□ -0.53
SOD2-216ENST00000546260 ADGRF5Q8IZF2 1346 aa11.75□□□□□ -0.53
SOD2-216ENST00000546260 PTH1RQ03431 593 aa11.75□□□□□ -0.53
SOD2-216ENST00000546260 BEND6Q5SZJ8 279 aaPredicted RBP11.75□□□□□ -0.53
SOD2-216ENST00000546260 GSPT2Q8IYD1 628 aaKnown RBP11.75□□□□□ -0.53
SOD2-216ENST00000546260 PNMA6EA0A0J9YXQ4 647 aa11.75□□□□□ -0.53
SOD2-216ENST00000546260 GSCP56915 257 aaPredicted RBP11.75□□□□□ -0.53
SOD2-216ENST00000546260 TAX1BP1Q86VP1 789 aa11.75□□□□□ -0.53
SOD2-216ENST00000546260 RAB11FIP4Q86YS3 637 aa11.75□□□□□ -0.53
SOD2-216ENST00000546260 C8orf76Q96K31 380 aa11.75□□□□□ -0.53
SOD2-216ENST00000546260 PNKPQ96T60 521 aa11.75□□□□□ -0.53
SOD2-216ENST00000546260 LAMC3Q9Y6N6 1575 aa11.75□□□□□ -0.53
SOD2-216ENST00000546260 ANKRD18BA2A2Z9 1011 aa11.74□□□□□ -0.53
SOD2-216ENST00000546260 CKAP4Q07065 602 aaKnown RBP11.74□□□□□ -0.53
SOD2-216ENST00000546260 PPP1R7Q15435 360 aa11.74□□□□□ -0.53
SOD2-216ENST00000546260 GRIPAP1Q4V328 841 aa11.74□□□□□ -0.53
SOD2-216ENST00000546260 Q6ZUG5 572 aa11.74□□□□□ -0.53
SOD2-216ENST00000546260 CPLX4Q7Z7G2 160 aa11.74□□□□□ -0.53
SOD2-216ENST00000546260 KAT2BQ92831 832 aa11.74□□□□□ -0.53
SOD2-216ENST00000546260 SPTLC2O15270 562 aa11.74□□□□□ -0.53
SOD2-216ENST00000546260 SETSIPP0DME0 302 aa11.74□□□□□ -0.53
SOD2-216ENST00000546260 NCAPH2Q6IBW4 605 aa11.74□□□□□ -0.53
SOD2-216ENST00000546260 RASSF8Q8NHQ8 419 aa11.74□□□□□ -0.53
SOD2-216ENST00000546260 THOC1Q96FV9 657 aaKnown RBP11.74□□□□□ -0.53
SOD2-216ENST00000546260 CLTAP09496 248 aa11.74□□□□□ -0.53
SOD2-216ENST00000546260 KRT32Q14532 448 aa11.74□□□□□ -0.53
SOD2-216ENST00000546260 CFAP58Q5T655 872 aa11.74□□□□□ -0.53
SOD2-216ENST00000546260 PPP1R42Q7Z4L9 355 aa11.74□□□□□ -0.53
SOD2-216ENST00000546260 DNMT1P26358 1616 aaKnown RBP11.74□□□□□ -0.53
SOD2-216ENST00000546260 TMCO5BA8MYB1 307 aa11.74□□□□□ -0.53
SOD2-216ENST00000546260 KIF5BP33176 963 aa11.74□□□□□ -0.53
SOD2-216ENST00000546260 IRAK1P51617 712 aa11.74□□□□□ -0.53
SOD2-216ENST00000546260 CRYMQ14894 314 aa11.74□□□□□ -0.53
SOD2-216ENST00000546260 CDC5LQ99459 802 aaKnown RBP11.74□□□□□ -0.53
SOD2-216ENST00000546260 NOS1P29475 1434 aa11.74□□□□□ -0.53
SOD2-216ENST00000546260 NUP160Q12769 1436 aa11.74□□□□□ -0.53
SOD2-216ENST00000546260 TMEM232C9JQI7 657 aa11.73□□□□□ -0.53
SOD2-216ENST00000546260 HLTFQ14527 1009 aaKnown RBP eCLIP11.73□□□□□ -0.53
SOD2-216ENST00000546260 NEK1Q96PY6 1258 aa11.73□□□□□ -0.53
SOD2-216ENST00000546260 SUDS3Q9H7L9 328 aaPredicted RBP11.73□□□□□ -0.53
SOD2-216ENST00000546260 FAM135BQ49AJ0 1406 aa11.73□□□□□ -0.53
SOD2-216ENST00000546260 CARMIL2Q6F5E8 1435 aa11.73□□□□□ -0.53
SOD2-216ENST00000546260 CC2D2AQ9P2K1 1620 aa11.73□□□□□ -0.53
SOD2-216ENST00000546260 VWA3AA6NCI4 1184 aa11.73□□□□□ -0.53
SOD2-216ENST00000546260 IRF6O14896 467 aa11.73□□□□□ -0.53
SOD2-216ENST00000546260 SMIM24O75264 130 aa11.73□□□□□ -0.53
SOD2-216ENST00000546260 ZNF202O95125 648 aa11.73□□□□□ -0.53
SOD2-216ENST00000546260 STX17P56962 302 aa11.73□□□□□ -0.53
SOD2-216ENST00000546260 OTUD7BQ6GQQ9 843 aa11.73□□□□□ -0.53
SOD2-216ENST00000546260 FCHSD1Q86WN1 690 aa11.73□□□□□ -0.53
SOD2-216ENST00000546260 SEC62Q99442 399 aaKnown RBP11.73□□□□□ -0.53
SOD2-216ENST00000546260 NDUFA8P51970 172 aa11.73□□□□□ -0.53
SOD2-216ENST00000546260 MYO1EQ12965 1108 aa11.73□□□□□ -0.53
SOD2-216ENST00000546260 WHAMMP3Q1A5X7 153 aa11.73□□□□□ -0.53
SOD2-216ENST00000546260 GNPTABQ3T906 1256 aa11.73□□□□□ -0.53
SOD2-216ENST00000546260 SPECC1LQ69YQ0 1117 aa11.73□□□□□ -0.53
SOD2-216ENST00000546260 TRIM68Q6AZZ1 485 aa11.73□□□□□ -0.53
SOD2-216ENST00000546260 SULT6B1Q6IMI4 303 aa11.73□□□□□ -0.53
SOD2-216ENST00000546260 SSH2Q76I76 1423 aa11.73□□□□□ -0.53
SOD2-216ENST00000546260 TRMT44Q8IYL2 757 aaKnown RBP11.73□□□□□ -0.53
SOD2-216ENST00000546260 IFT81Q8WYA0 676 aa11.73□□□□□ -0.53
SOD2-216ENST00000546260 ENC1O14682 589 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 GPTP24298 496 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 RWDD2BP57060 319 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms