RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 GNL3LQ9NVN8 582 aaKnown RBP25.55■■□□□ 1.68
SCARB1-211ENST00000546215 JAG2Q9Y219 1238 aa25.55■■□□□ 1.68
SCARB1-211ENST00000546215 SMARCA5O60264 1052 aaPredicted RBP25.54■■□□□ 1.68
SCARB1-211ENST00000546215 FRAT2O75474 233 aaPredicted RBP25.54■■□□□ 1.68
SCARB1-211ENST00000546215 RPS12P25398 132 aaKnown RBP25.54■■□□□ 1.68
SCARB1-211ENST00000546215 DPF2Q92785 391 aa25.54■■□□□ 1.68
SCARB1-211ENST00000546215 GCC1Q96CN9 775 aa25.54■■□□□ 1.68
SCARB1-211ENST00000546215 AGBL3Q8NEM8 1001 aa25.53■■□□□ 1.68
SCARB1-211ENST00000546215 GPRC5DQ9NZD1 345 aa25.52■■□□□ 1.68
SCARB1-211ENST00000546215 SCN4AP35499 1836 aa25.52■■□□□ 1.68
SCARB1-211ENST00000546215 SEMA3EO15041 775 aa25.52■■□□□ 1.68
SCARB1-211ENST00000546215 VEGFAP15692 232 aaPredicted RBP25.52■■□□□ 1.68
SCARB1-211ENST00000546215 FKBP1AP62942 108 aaKnown RBP25.52■■□□□ 1.68
SCARB1-211ENST00000546215 CHAF1AQ13111 956 aaPredicted RBP25.52■■□□□ 1.68
SCARB1-211ENST00000546215 SMC5Q8IY18 1101 aa25.52■■□□□ 1.68
SCARB1-211ENST00000546215 CERS5Q8N5B7 392 aa25.52■■□□□ 1.68
SCARB1-211ENST00000546215 COL1A1P02452 1464 aaPredicted RBP25.51■■□□□ 1.67
SCARB1-211ENST00000546215 MYO3BQ8WXR4 1341 aa25.51■■□□□ 1.67
SCARB1-211ENST00000546215 IQCA1LA6NCM1 817 aa25.51■■□□□ 1.67
SCARB1-211ENST00000546215 ARID4AP29374 1257 aaPredicted RBP25.51■■□□□ 1.67
SCARB1-211ENST00000546215 EPS15P42566 896 aa25.51■■□□□ 1.67
SCARB1-211ENST00000546215 RASGRF1Q13972 1273 aa25.51■■□□□ 1.67
SCARB1-211ENST00000546215 CCDC158Q5M9N0 1113 aa25.51■■□□□ 1.67
SCARB1-211ENST00000546215 BCL11AQ9H165 835 aa25.51■■□□□ 1.67
SCARB1-211ENST00000546215 HACL1Q9UJ83 578 aa25.51■■□□□ 1.67
SCARB1-211ENST00000546215 DENND2AQ9ULE3 1009 aa25.51■■□□□ 1.67
SCARB1-211ENST00000546215 MYH13Q9UKX3 1938 aa25.51■■□□□ 1.67
SCARB1-211ENST00000546215 NEFLP07196 543 aa25.5■■□□□ 1.67
SCARB1-211ENST00000546215 IFIT2P09913 472 aaKnown RBP25.5■■□□□ 1.67
SCARB1-211ENST00000546215 CNOT7Q9UIV1 285 aaKnown RBP25.5■■□□□ 1.67
SCARB1-211ENST00000546215 SHTN1A0MZ66 631 aa25.49■■□□□ 1.67
SCARB1-211ENST00000546215 LMOD1P29536 600 aaPredicted RBP25.49■■□□□ 1.67
SCARB1-211ENST00000546215 MFSD14BQ5SR56 506 aa25.49■■□□□ 1.67
SCARB1-211ENST00000546215 UQCRFS1P1P0C7P4 283 aa25.48■■□□□ 1.67
SCARB1-211ENST00000546215 TTC39AQ5SRH9 613 aa25.48■■□□□ 1.67
SCARB1-211ENST00000546215 MICALL2Q8IY33 904 aa25.48■■□□□ 1.67
SCARB1-211ENST00000546215 ZNF512BQ96KM6 892 aaPredicted RBP25.48■■□□□ 1.67
SCARB1-211ENST00000546215 TAF1DQ9H5J8 278 aaPredicted RBP25.48■■□□□ 1.67
SCARB1-211ENST00000546215 KIF3CO14782 793 aa25.48■■□□□ 1.67
SCARB1-211ENST00000546215 MCAMP43121 646 aa25.48■■□□□ 1.67
SCARB1-211ENST00000546215 SCARF1Q14162 830 aa25.48■■□□□ 1.67
SCARB1-211ENST00000546215 ANKRD45Q5TZF3 282 aa25.48■■□□□ 1.67
SCARB1-211ENST00000546215 WDR66Q8TBY9 1149 aa25.48■■□□□ 1.67
SCARB1-211ENST00000546215 TBC1D22AQ8WUA7 517 aa25.48■■□□□ 1.67
SCARB1-211ENST00000546215 PDS5AQ29RF7 1337 aaKnown RBP25.47■■□□□ 1.67
SCARB1-211ENST00000546215 USP17L8P0C7I0 530 aa25.47■■□□□ 1.67
SCARB1-211ENST00000546215 EPHX2P34913 555 aa25.47■■□□□ 1.67
SCARB1-211ENST00000546215 HMG20BQ9P0W2 317 aa25.47■■□□□ 1.67
SCARB1-211ENST00000546215 ZNF280AP59817 542 aaPredicted RBP25.46■■□□□ 1.67
SCARB1-211ENST00000546215 PI16Q6UXB8 463 aa25.46■■□□□ 1.67
SCARB1-211ENST00000546215 KIAA0825Q8IV33 1275 aa25.46■■□□□ 1.67
SCARB1-211ENST00000546215 AKAP11Q9UKA4 1901 aa25.45■■□□□ 1.67
SCARB1-211ENST00000546215 H7C1D1 291 aa25.45■■□□□ 1.66
SCARB1-211ENST00000546215 GRIK5Q16478 980 aa25.45■■□□□ 1.66
SCARB1-211ENST00000546215 SPATA5Q8NB90 893 aa25.45■■□□□ 1.66
SCARB1-211ENST00000546215 ADARB2Q9NS39 739 aaKnown RBP25.45■■□□□ 1.66
SCARB1-211ENST00000546215 SALL1Q9NSC2 1324 aa25.44■■□□□ 1.66
SCARB1-211ENST00000546215 C16orf71Q8IYS4 520 aaPredicted RBP25.44■■□□□ 1.66
SCARB1-211ENST00000546215 B4GALNT3Q6L9W6 998 aa25.43■■□□□ 1.66
SCARB1-211ENST00000546215 SAMD7Q7Z3H4 446 aa25.43■■□□□ 1.66
SCARB1-211ENST00000546215 OGFOD1Q8N543 542 aa25.43■■□□□ 1.66
SCARB1-211ENST00000546215 SUGT1Q9Y2Z0 365 aa25.43■■□□□ 1.66
SCARB1-211ENST00000546215 F8W031 263 aaPredicted RBP25.42■■□□□ 1.66
SCARB1-211ENST00000546215 EGFRP00533 1210 aa25.42■■□□□ 1.66
SCARB1-211ENST00000546215 MMP14P50281 582 aa25.42■■□□□ 1.66
SCARB1-211ENST00000546215 USP50Q70EL3 339 aaPredicted RBP25.42■■□□□ 1.66
SCARB1-211ENST00000546215 SNRKQ9NRH2 765 aa25.42■■□□□ 1.66
SCARB1-211ENST00000546215 ZBTB47Q9UFB7 747 aaPredicted RBP25.42■■□□□ 1.66
SCARB1-211ENST00000546215 NUCB1Q02818 461 aa25.41■■□□□ 1.66
SCARB1-211ENST00000546215 PNMA8AQ86V59 439 aaPredicted RBP25.41■■□□□ 1.66
SCARB1-211ENST00000546215 TRPM4Q8TD43 1214 aa25.41■■□□□ 1.66
SCARB1-211ENST00000546215 HIRAP54198 1017 aaPredicted RBP25.4■■□□□ 1.66
SCARB1-211ENST00000546215 OTUD7AQ8TE49 926 aaPredicted RBP25.4■■□□□ 1.66
SCARB1-211ENST00000546215 MYOZ2Q9NPC6 264 aa25.4■■□□□ 1.66
SCARB1-211ENST00000546215 HDAC9Q9UKV0 1011 aa25.4■■□□□ 1.66
SCARB1-211ENST00000546215 TTF2Q9UNY4 1162 aaKnown RBP25.4■■□□□ 1.66
SCARB1-211ENST00000546215 POTEIP0CG38 1075 aa25.39■■□□□ 1.66
SCARB1-211ENST00000546215 POTEJP0CG39 1038 aa25.39■■□□□ 1.66
SCARB1-211ENST00000546215 PRDX5P30044 214 aa25.39■■□□□ 1.66
SCARB1-211ENST00000546215 ZAP70P43403 619 aa25.39■■□□□ 1.66
SCARB1-211ENST00000546215 TBC1D10BQ4KMP7 808 aaPredicted RBP25.39■■□□□ 1.66
SCARB1-211ENST00000546215 ZGPATQ8N5A5 531 aaKnown RBP25.39■■□□□ 1.66
SCARB1-211ENST00000546215 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.39■■□□□ 1.66
SCARB1-211ENST00000546215 CYP2E1P05181 493 aaPredicted RBP25.39■■□□□ 1.65
SCARB1-211ENST00000546215 ATP5JP18859 108 aa25.39■■□□□ 1.65
SCARB1-211ENST00000546215 EAPPQ56P03 285 aaPredicted RBP25.39■■□□□ 1.65
SCARB1-211ENST00000546215 RBM26Q5T8P6 1007 aaKnown RBP25.39■■□□□ 1.65
SCARB1-211ENST00000546215 CHD1LQ86WJ1 897 aa25.39■■□□□ 1.65
SCARB1-211ENST00000546215 LNPKQ9C0E8 428 aa25.39■■□□□ 1.65
SCARB1-211ENST00000546215 ECHDC1Q9NTX5 307 aa25.39■■□□□ 1.65
SCARB1-211ENST00000546215 SALL3Q9BXA9 1300 aa25.38■■□□□ 1.65
SCARB1-211ENST00000546215 KIF4BQ2VIQ3 1234 aa25.38■■□□□ 1.65
SCARB1-211ENST00000546215 TBC1D9Q6ZT07 1266 aa25.38■■□□□ 1.65
SCARB1-211ENST00000546215 ABCF2Q9UG63 623 aa25.38■■□□□ 1.65
SCARB1-211ENST00000546215 NDUFB9Q9Y6M9 179 aa25.38■■□□□ 1.65
SCARB1-211ENST00000546215 LDHBP07195 334 aaKnown RBP25.37■■□□□ 1.65
SCARB1-211ENST00000546215 ERICH6BQ5W0A0 696 aa25.36■■□□□ 1.65
SCARB1-211ENST00000546215 GPATCH3Q96I76 525 aa25.36■■□□□ 1.65
SCARB1-211ENST00000546215 BOLA2Q9H3K6 86 aa25.36■■□□□ 1.65
SCARB1-211ENST00000546215 SERPINA10Q9UK55 444 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms