RNA–Protein interactions for RNA: ENST00000545930.5

DDB1-225, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,278 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-225ENST00000545930 C2CD5Q86YS7 1000 aa11.97□□□□□ -0.49
DDB1-225ENST00000545930 GRAPLQ8TC17 118 aaPredicted RBP11.97□□□□□ -0.49
DDB1-225ENST00000545930 CNKSR1Q969H4 720 aa11.97□□□□□ -0.49
DDB1-225ENST00000545930 CCDC85AQ96PX6 553 aaPredicted RBP11.97□□□□□ -0.49
DDB1-225ENST00000545930 LRRCC1Q9C099 1032 aa11.97□□□□□ -0.49
DDB1-225ENST00000545930 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.97□□□□□ -0.49
DDB1-225ENST00000545930 CEP126Q9P2H0 1117 aa11.97□□□□□ -0.49
DDB1-225ENST00000545930 MROH5Q6ZUA9 1318 aa11.96□□□□□ -0.49
DDB1-225ENST00000545930 ANKRD45Q5TZF3 282 aa11.96□□□□□ -0.49
DDB1-225ENST00000545930 SEC31BQ9NQW1 1179 aa11.96□□□□□ -0.49
DDB1-225ENST00000545930 PA2G4Q9UQ80 394 aaKnown RBP11.96□□□□□ -0.49
DDB1-225ENST00000545930 AKAP2Q9Y2D5 859 aa11.96□□□□□ -0.49
DDB1-225ENST00000545930 GRIPAP1Q4V328 841 aa11.95□□□□□ -0.5
DDB1-225ENST00000545930 CLASRPQ8N2M8 674 aaKnown RBP11.95□□□□□ -0.5
DDB1-225ENST00000545930 SPRYD3Q8NCJ5 442 aa11.95□□□□□ -0.5
DDB1-225ENST00000545930 RHPN1Q8TCX5 695 aa11.95□□□□□ -0.5
DDB1-225ENST00000545930 ZNF622Q969S3 477 aaKnown RBP eCLIP11.95□□□□□ -0.54e-6■■□□□ 13.5
DDB1-225ENST00000545930 ZNF594Q96JF6 807 aaPredicted RBP11.95□□□□□ -0.5
DDB1-225ENST00000545930 ANKRD2Q9GZV1 360 aa11.95□□□□□ -0.5
DDB1-225ENST00000545930 SIL1Q9H173 461 aa11.95□□□□□ -0.5
DDB1-225ENST00000545930 EXOC6BQ9Y2D4 811 aa11.95□□□□□ -0.5
DDB1-225ENST00000545930 C10orf71Q711Q0 1435 aa11.94□□□□□ -0.5
DDB1-225ENST00000545930 KDM2BQ8NHM5 1336 aa11.94□□□□□ -0.5
DDB1-225ENST00000545930 SPDYE16A6NNV3 312 aaPredicted RBP11.94□□□□□ -0.5
DDB1-225ENST00000545930 NUCB1Q02818 461 aa11.94□□□□□ -0.5
DDB1-225ENST00000545930 CC2D2BQ6DHV5 1058 aa11.94□□□□□ -0.5
DDB1-225ENST00000545930 KLHDC4Q8TBB5 520 aa11.94□□□□□ -0.5
DDB1-225ENST00000545930 GPR108Q9NPR9 543 aa11.94□□□□□ -0.5
DDB1-225ENST00000545930 PPP1R1BQ9UD71 204 aaPredicted RBP11.94□□□□□ -0.5
DDB1-225ENST00000545930 RIPOR2Q9Y4F9 1068 aa11.94□□□□□ -0.5
DDB1-225ENST00000545930 SOWAHBA6NEL2 793 aa11.93□□□□□ -0.5
DDB1-225ENST00000545930 METTL24Q5JXM2 366 aa11.93□□□□□ -0.5
DDB1-225ENST00000545930 CHD1LQ86WJ1 897 aa11.93□□□□□ -0.5
DDB1-225ENST00000545930 SP8Q8IXZ3 490 aa11.93□□□□□ -0.5
DDB1-225ENST00000545930 TTLL6Q8N841 843 aa11.93□□□□□ -0.5
DDB1-225ENST00000545930 CELF1Q92879 486 aaKnown RBP11.93□□□□□ -0.5
DDB1-225ENST00000545930 PIM2Q9P1W9 311 aa11.93□□□□□ -0.5
DDB1-225ENST00000545930 KIAA1468Q9P260 1216 aa11.93□□□□□ -0.5
DDB1-225ENST00000545930 ANKRD31Q8N7Z5 1873 aa11.93□□□□□ -0.5
DDB1-225ENST00000545930 TRIM6-TRIM34B2RNG4 842 aa11.92□□□□□ -0.5
DDB1-225ENST00000545930 PDE8BO95263 885 aa11.92□□□□□ -0.5
DDB1-225ENST00000545930 LRRC24Q50LG9 513 aa11.92□□□□□ -0.5
DDB1-225ENST00000545930 SOGA3Q5TF21 947 aa11.92□□□□□ -0.5
DDB1-225ENST00000545930 ATG9AQ7Z3C6 839 aa11.92□□□□□ -0.5
DDB1-225ENST00000545930 KIF13BQ9NQT8 1826 aa11.92□□□□□ -0.5
DDB1-225ENST00000545930 APBB1O00213 710 aa11.91□□□□□ -0.5
DDB1-225ENST00000545930 PPEF1O14829 653 aaPredicted RBP11.91□□□□□ -0.5
DDB1-225ENST00000545930 SASH1O94885 1247 aa11.91□□□□□ -0.5
DDB1-225ENST00000545930 ITGBL1O95965 494 aaPredicted RBP11.91□□□□□ -0.5
DDB1-225ENST00000545930 IFIT2P09913 472 aaKnown RBP11.91□□□□□ -0.5
DDB1-225ENST00000545930 IFIT1P09914 478 aaKnown RBP11.91□□□□□ -0.5
DDB1-225ENST00000545930 CHRNDQ07001 517 aa11.91□□□□□ -0.5
DDB1-225ENST00000545930 ZFRQ96KR1 1074 aaKnown RBP11.91□□□□□ -0.5
DDB1-225ENST00000545930 PUS3Q9BZE2 481 aaKnown RBP11.91□□□□□ -0.5
DDB1-225ENST00000545930 ANKIB1Q9P2G1 1089 aa11.91□□□□□ -0.5
DDB1-225ENST00000545930 MINPP1Q9UNW1 487 aa11.91□□□□□ -0.5
DDB1-225ENST00000545930 LEMD3Q9Y2U8 911 aa11.91□□□□□ -0.5
DDB1-225ENST00000545930 ATP6V0A2Q9Y487 856 aa11.91□□□□□ -0.5
DDB1-225ENST00000545930 A0A0G2JLW4 131 aa11.9□□□□□ -0.5
DDB1-225ENST00000545930 SLC5A1P13866 664 aa11.9□□□□□ -0.5
DDB1-225ENST00000545930 DPEP1P16444 411 aa11.9□□□□□ -0.5
DDB1-225ENST00000545930 ATP2B4P23634 1241 aa11.9□□□□□ -0.5
DDB1-225ENST00000545930 CHRNA5P30532 468 aa11.9□□□□□ -0.5
DDB1-225ENST00000545930 KCNJ4P48050 445 aa11.9□□□□□ -0.5
DDB1-225ENST00000545930 TFCP2Q12800 502 aa11.9□□□□□ -0.5
DDB1-225ENST00000545930 UBE4AQ14139 1066 aa11.9□□□□□ -0.5
DDB1-225ENST00000545930 PUM3Q15397 648 aaKnown RBP11.9□□□□□ -0.5
DDB1-225ENST00000545930 LPIN2Q92539 896 aa11.9□□□□□ -0.5
DDB1-225ENST00000545930 GPATCH3Q96I76 525 aa11.9□□□□□ -0.5
DDB1-225ENST00000545930 TNRC6CQ9HCJ0 1690 aaKnown RBP11.9□□□□□ -0.5
DDB1-225ENST00000545930 XDHP47989 1333 aa11.89□□□□□ -0.51
DDB1-225ENST00000545930 TNNI3KQ59H18 835 aa11.89□□□□□ -0.51
DDB1-225ENST00000545930 DALRD3Q5D0E6 543 aaKnown RBP11.89□□□□□ -0.51
DDB1-225ENST00000545930 DDX12PQ92771 950 aa11.89□□□□□ -0.51
DDB1-225ENST00000545930 NEUROD6Q96NK8 337 aa11.89□□□□□ -0.51
DDB1-225ENST00000545930 IL1RAPL2Q9NP60 686 aa11.89□□□□□ -0.51
DDB1-225ENST00000545930 PODXL2Q9NZ53 605 aa11.89□□□□□ -0.51
DDB1-225ENST00000545930 ARIH1Q9Y4X5 557 aaPredicted RBP11.89□□□□□ -0.51
DDB1-225ENST00000545930 FPGT-TNNI3KV9GXZ4 949 aa11.89□□□□□ -0.51
DDB1-225ENST00000545930 KCNA3P22001 575 aa11.88□□□□□ -0.51
DDB1-225ENST00000545930 ATP2B3Q16720 1220 aa11.88□□□□□ -0.51
DDB1-225ENST00000545930 CCDC158Q5M9N0 1113 aa11.88□□□□□ -0.51
DDB1-225ENST00000545930 GORABQ5T7V8 394 aa11.88□□□□□ -0.51
DDB1-225ENST00000545930 PRPF40BQ6NWY9 871 aaKnown RBP11.88□□□□□ -0.51
DDB1-225ENST00000545930 AACSQ86V21 672 aa11.88□□□□□ -0.51
DDB1-225ENST00000545930 RTKN2Q8IZC4 609 aa11.88□□□□□ -0.51
DDB1-225ENST00000545930 MPNDQ8N594 471 aa11.88□□□□□ -0.51
DDB1-225ENST00000545930 SUPT20HQ8NEM7 779 aa11.88□□□□□ -0.51
DDB1-225ENST00000545930 LNPKQ9C0E8 428 aa11.88□□□□□ -0.51
DDB1-225ENST00000545930 GGA1Q9UJY5 639 aa11.88□□□□□ -0.51
DDB1-225ENST00000545930 NSFL1CQ9UNZ2 370 aaKnown RBP11.88□□□□□ -0.51
DDB1-225ENST00000545930 TAF1P21675 1872 aa11.88□□□□□ -0.51
DDB1-225ENST00000545930 A0A1B0GUL7 405 aa11.87□□□□□ -0.51
DDB1-225ENST00000545930 ERC2O15083 957 aa11.87□□□□□ -0.51
DDB1-225ENST00000545930 SMARCA5O60264 1052 aaPredicted RBP11.87□□□□□ -0.51
DDB1-225ENST00000545930 NBR1Q14596 966 aa11.87□□□□□ -0.51
DDB1-225ENST00000545930 CAVIN4Q5BKX8 364 aa11.87□□□□□ -0.51
DDB1-225ENST00000545930 DPP8Q6V1X1 898 aaPredicted RBP11.87□□□□□ -0.51
DDB1-225ENST00000545930 VGLL2Q8N8G2 317 aa11.87□□□□□ -0.51
DDB1-225ENST00000545930 HELBQ8NG08 1087 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms