RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 IFIT3O14879 490 aaKnown RBP9.95□□□□□ -0.82
CLIP1-218ENST00000545889 TNNT1P13805 278 aa9.95□□□□□ -0.82
CLIP1-218ENST00000545889 RBM6P78332 1123 aaKnown RBP9.95□□□□□ -0.82
CLIP1-218ENST00000545889 NBPF10Q6P3W6 841 aaKnown RBP9.95□□□□□ -0.82
CLIP1-218ENST00000545889 NBPF15Q8N660 670 aa9.95□□□□□ -0.82
CLIP1-218ENST00000545889 ZNF526Q8TF50 670 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-218ENST00000545889 UBA5Q9GZZ9 404 aa9.95□□□□□ -0.82
CLIP1-218ENST00000545889 PXDNQ92626 1479 aa9.95□□□□□ -0.82
CLIP1-218ENST00000545889 CCDC194A0A1B0GVG4 234 aa9.95□□□□□ -0.82
CLIP1-218ENST00000545889 UQCRFS1P1P0C7P4 283 aa9.95□□□□□ -0.82
CLIP1-218ENST00000545889 NOD1Q9Y239 953 aa9.95□□□□□ -0.82
CLIP1-218ENST00000545889 IQSEC2Q5JU85 1478 aa9.95□□□□□ -0.82
CLIP1-218ENST00000545889 NRKQ7Z2Y5 1582 aa9.95□□□□□ -0.82
CLIP1-218ENST00000545889 CDR1P51861 262 aa9.95□□□□□ -0.82
CLIP1-218ENST00000545889 GPS2Q13227 327 aa9.95□□□□□ -0.82
CLIP1-218ENST00000545889 HLFQ16534 295 aa9.95□□□□□ -0.82
CLIP1-218ENST00000545889 LARP1BQ659C4 914 aaKnown RBP9.95□□□□□ -0.82
CLIP1-218ENST00000545889 CATIPQ7Z7H3 387 aa9.95□□□□□ -0.82
CLIP1-218ENST00000545889 FSD2A1L4K1 749 aa9.95□□□□□ -0.82
CLIP1-218ENST00000545889 ITGA6P23229 1130 aa9.95□□□□□ -0.82
CLIP1-218ENST00000545889 SMARCE1Q969G3 411 aa9.95□□□□□ -0.82
CLIP1-218ENST00000545889 MAP3K15Q6ZN16 1313 aa9.95□□□□□ -0.82
CLIP1-218ENST00000545889 ZNF142P52746 1687 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-218ENST00000545889 COL5A2P05997 1499 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-218ENST00000545889 IL6STP40189 918 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-218ENST00000545889 ATP2B3Q16720 1220 aa9.94□□□□□ -0.82
CLIP1-218ENST00000545889 TMEM266Q2M3C6 531 aa9.94□□□□□ -0.82
CLIP1-218ENST00000545889 NOM1Q5C9Z4 860 aaKnown RBP9.94□□□□□ -0.82
CLIP1-218ENST00000545889 TTC16Q8NEE8 873 aa9.94□□□□□ -0.82
CLIP1-218ENST00000545889 DEF6Q9H4E7 631 aa9.94□□□□□ -0.82
CLIP1-218ENST00000545889 IVNS1ABPQ9Y6Y0 642 aa9.94□□□□□ -0.82
CLIP1-218ENST00000545889 SDSP20132 328 aa9.94□□□□□ -0.82
CLIP1-218ENST00000545889 KIF5BP33176 963 aa9.94□□□□□ -0.82
CLIP1-218ENST00000545889 PDE6BP35913 854 aa9.94□□□□□ -0.82
CLIP1-218ENST00000545889 RBM25P49756 843 aaKnown RBP9.94□□□□□ -0.82
CLIP1-218ENST00000545889 RABEP1Q15276 862 aa9.94□□□□□ -0.82
CLIP1-218ENST00000545889 GIGYF2Q6Y7W6 1299 aaKnown RBP9.94□□□□□ -0.82
CLIP1-218ENST00000545889 SYNE4Q8N205 404 aa9.94□□□□□ -0.82
CLIP1-218ENST00000545889 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.94□□□□□ -0.82
CLIP1-218ENST00000545889 BAG4O95429 457 aaKnown RBP9.94□□□□□ -0.82
CLIP1-218ENST00000545889 SSR1P43307 286 aaKnown RBP9.94□□□□□ -0.82
CLIP1-218ENST00000545889 TTC22Q5TAA0 569 aa9.94□□□□□ -0.82
CLIP1-218ENST00000545889 KAT14Q9H8E8 782 aa9.94□□□□□ -0.82
CLIP1-218ENST00000545889 SLC12A7Q9Y666 1083 aa9.94□□□□□ -0.82
CLIP1-218ENST00000545889 IL15P40933 162 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-218ENST00000545889 ARHGAP27Q6ZUM4 889 aa9.93□□□□□ -0.82
CLIP1-218ENST00000545889 CCDC12Q8WUD4 166 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-218ENST00000545889 NDUFB9Q9Y6M9 179 aa9.93□□□□□ -0.82
CLIP1-218ENST00000545889 TBC1D9Q6ZT07 1266 aa9.93□□□□□ -0.82
CLIP1-218ENST00000545889 PLEKHM2Q8IWE5 1019 aa9.93□□□□□ -0.82
CLIP1-218ENST00000545889 CNPY4Q8N129 248 aa9.93□□□□□ -0.82
CLIP1-218ENST00000545889 ZNF710Q8N1W2 664 aa9.93□□□□□ -0.82
CLIP1-218ENST00000545889 RUFY1Q96T51 708 aa9.93□□□□□ -0.82
CLIP1-218ENST00000545889 MYO6Q9UM54 1294 aa9.93□□□□□ -0.82
CLIP1-218ENST00000545889 JAG2Q9Y219 1238 aa9.93□□□□□ -0.82
CLIP1-218ENST00000545889 CEMIPQ8WUJ3 1361 aa9.93□□□□□ -0.82
CLIP1-218ENST00000545889 IGKV5-2P06315 115 aa9.93□□□□□ -0.82
CLIP1-218ENST00000545889 PARP10Q53GL7 1025 aa9.93□□□□□ -0.82
CLIP1-218ENST00000545889 CAGE1Q8TC20 777 aa9.93□□□□□ -0.82
CLIP1-218ENST00000545889 RBM17Q96I25 401 aaKnown RBP9.93□□□□□ -0.82
CLIP1-218ENST00000545889 TMX1Q9H3N1 280 aa9.93□□□□□ -0.82
CLIP1-218ENST00000545889 PDRG1Q9NUG6 133 aa9.93□□□□□ -0.82
CLIP1-218ENST00000545889 KDM2BQ8NHM5 1336 aa9.93□□□□□ -0.82
CLIP1-218ENST00000545889 TAF5LO75529 589 aa9.92□□□□□ -0.82
CLIP1-218ENST00000545889 SEC24BO95487 1268 aa9.92□□□□□ -0.82
CLIP1-218ENST00000545889 CYP19A1P11511 503 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-218ENST00000545889 ZSCAN20P17040 1043 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-218ENST00000545889 NLRP5P59047 1200 aa9.92□□□□□ -0.82
CLIP1-218ENST00000545889 CAMTA1Q9Y6Y1 1673 aa9.92□□□□□ -0.82
CLIP1-218ENST00000545889 PDE8AO60658 829 aa9.92□□□□□ -0.82
CLIP1-218ENST00000545889 CYP7A1P22680 504 aa9.92□□□□□ -0.82
CLIP1-218ENST00000545889 NAA16Q6N069 864 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-218ENST00000545889 PIK3C2AO00443 1686 aa9.92□□□□□ -0.82
CLIP1-218ENST00000545889 SMC2O95347 1197 aa9.92□□□□□ -0.82
CLIP1-218ENST00000545889 BRDTQ58F21 947 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-218ENST00000545889 BMP2KLQ5H9B9 411 aa9.92□□□□□ -0.82
CLIP1-218ENST00000545889 BARGINQ6ZT62 677 aa9.92□□□□□ -0.82
CLIP1-218ENST00000545889 SIRT2Q8IXJ6 389 aa9.92□□□□□ -0.82
CLIP1-218ENST00000545889 CEP57L1Q8IYX8 460 aa9.92□□□□□ -0.82
CLIP1-218ENST00000545889 FLAD1Q8NFF5 587 aa9.92□□□□□ -0.82
CLIP1-218ENST00000545889 DDX11Q96FC9 970 aa9.92□□□□□ -0.82
CLIP1-218ENST00000545889 H7C1D1 291 aa9.92□□□□□ -0.82
CLIP1-218ENST00000545889 EYA2O00167 538 aa9.92□□□□□ -0.82
CLIP1-218ENST00000545889 NEFHP12036 1026 aa9.92□□□□□ -0.82
CLIP1-218ENST00000545889 U2AF2P26368 475 aaKnown RBP eCLIP9.92□□□□□ -0.821e-6■■■■□ 26
CLIP1-218ENST00000545889 CCDC150Q8NCX0 1101 aa9.92□□□□□ -0.82
CLIP1-218ENST00000545889 DBNDD2Q9BQY9 259 aa9.92□□□□□ -0.82
CLIP1-218ENST00000545889 DACH1Q9UI36 760 aa9.92□□□□□ -0.82
CLIP1-218ENST00000545889 CEP131Q9UPN4 1083 aa9.92□□□□□ -0.82
CLIP1-218ENST00000545889 PLCG2P16885 1265 aa9.91□□□□□ -0.82
CLIP1-218ENST00000545889 PRKG1Q13976 671 aa9.91□□□□□ -0.82
CLIP1-218ENST00000545889 GAS2L3Q86XJ1 694 aa9.91□□□□□ -0.82
CLIP1-218ENST00000545889 PICK1Q9NRD5 415 aa9.91□□□□□ -0.82
CLIP1-218ENST00000545889 OVOS2A0A0G2JMS6 1433 aa9.91□□□□□ -0.82
CLIP1-218ENST00000545889 SETD1AO15047 1707 aaKnown RBP9.91□□□□□ -0.82
CLIP1-218ENST00000545889 KIF1AQ12756 1690 aa9.91□□□□□ -0.82
CLIP1-218ENST00000545889 TERF1P54274 439 aa9.91□□□□□ -0.82
CLIP1-218ENST00000545889 TEX2Q8IWB9 1127 aa9.91□□□□□ -0.82
CLIP1-218ENST00000545889 CALCOCO1Q9P1Z2 691 aa9.91□□□□□ -0.82
CLIP1-218ENST00000545889 MON2Q7Z3U7 1717 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms