RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 PCCAP05165 728 aaPredicted RBP27.29■■□□□ 1.96
FOXA1-202ENST00000545425 UQCRHP07919 91 aa27.29■■□□□ 1.96
FOXA1-202ENST00000545425 STOX1Q6ZVD7 989 aa27.29■■□□□ 1.96
FOXA1-202ENST00000545425 TDRD7Q8NHU6 1098 aaKnown RBP27.29■■□□□ 1.96
FOXA1-202ENST00000545425 BICD2Q8TD16 824 aa27.29■■□□□ 1.96
FOXA1-202ENST00000545425 E7EWF7 191 aa27.28■■□□□ 1.96
FOXA1-202ENST00000545425 COL9A3Q14050 684 aaPredicted RBP27.28■■□□□ 1.96
FOXA1-202ENST00000545425 MAST3O60307 1309 aa27.28■■□□□ 1.96
FOXA1-202ENST00000545425 SALL1Q9NSC2 1324 aa27.28■■□□□ 1.96
FOXA1-202ENST00000545425 DHX16O60231 1041 aaKnown RBP27.27■■□□□ 1.96
FOXA1-202ENST00000545425 SLC27A3Q5K4L6 730 aa27.27■■□□□ 1.96
FOXA1-202ENST00000545425 STK32BQ9NY57 414 aa27.27■■□□□ 1.96
FOXA1-202ENST00000545425 A1BGP04217 495 aa27.26■■□□□ 1.95
FOXA1-202ENST00000545425 TIMM10P62072 90 aa27.26■■□□□ 1.95
FOXA1-202ENST00000545425 TFIP11Q9UBB9 837 aaKnown RBP27.26■■□□□ 1.95
FOXA1-202ENST00000545425 CDHR2Q9BYE9 1310 aa27.26■■□□□ 1.95
FOXA1-202ENST00000545425 KAT6BQ8WYB5 2073 aa27.25■■□□□ 1.95
FOXA1-202ENST00000545425 PTPDC1A2A3K4 754 aa27.25■■□□□ 1.95
FOXA1-202ENST00000545425 PGBD1Q96JS3 809 aa27.25■■□□□ 1.95
FOXA1-202ENST00000545425 BTAF1O14981 1849 aa27.25■■□□□ 1.95
FOXA1-202ENST00000545425 FAM173BQ6P4H8 233 aa27.25■■□□□ 1.95
FOXA1-202ENST00000545425 KIF6Q6ZMV9 814 aa27.25■■□□□ 1.95
FOXA1-202ENST00000545425 MYRIPQ8NFW9 859 aa27.25■■□□□ 1.95
FOXA1-202ENST00000545425 ZNF512BQ96KM6 892 aaPredicted RBP27.25■■□□□ 1.95
FOXA1-202ENST00000545425 CSF1RP07333 972 aa27.24■■□□□ 1.95
FOXA1-202ENST00000545425 CDC25BP30305 580 aa27.24■■□□□ 1.95
FOXA1-202ENST00000545425 IMMTQ16891 758 aaKnown RBP27.24■■□□□ 1.95
FOXA1-202ENST00000545425 HSP90AB3PQ58FF7 597 aa27.24■■□□□ 1.95
FOXA1-202ENST00000545425 TTC39AQ5SRH9 613 aa27.24■■□□□ 1.95
FOXA1-202ENST00000545425 ZSCAN25Q6NSZ9 544 aa27.24■■□□□ 1.95
FOXA1-202ENST00000545425 LRRC24Q50LG9 513 aa27.23■■□□□ 1.95
FOXA1-202ENST00000545425 KIAA1524Q8TCG1 905 aa27.23■■□□□ 1.95
FOXA1-202ENST00000545425 ZBTB3Q9H5J0 574 aa27.23■■□□□ 1.95
FOXA1-202ENST00000545425 CBX8Q9HC52 389 aa27.23■■□□□ 1.95
FOXA1-202ENST00000545425 GTF2F1P35269 517 aaKnown RBP eCLIP27.23■■□□□ 1.95
FOXA1-202ENST00000545425 SLC15A2Q16348 729 aa27.23■■□□□ 1.95
FOXA1-202ENST00000545425 DNTTIP2Q5QJE6 756 aaKnown RBP27.23■■□□□ 1.95
FOXA1-202ENST00000545425 NDUFB9Q9Y6M9 179 aa27.23■■□□□ 1.95
FOXA1-202ENST00000545425 DOT1LQ8TEK3 1739 aa27.22■■□□□ 1.95
FOXA1-202ENST00000545425 PDIA3P30101 505 aaKnown RBP27.22■■□□□ 1.95
FOXA1-202ENST00000545425 ADD1P35611 737 aaKnown RBP27.22■■□□□ 1.95
FOXA1-202ENST00000545425 ANO6Q4KMQ2 910 aa27.22■■□□□ 1.95
FOXA1-202ENST00000545425 GORABQ5T7V8 394 aa27.22■■□□□ 1.95
FOXA1-202ENST00000545425 CCDC73Q6ZRK6 1079 aa27.22■■□□□ 1.95
FOXA1-202ENST00000545425 ZBTB38Q8NAP3 1195 aaPredicted RBP27.22■■□□□ 1.95
FOXA1-202ENST00000545425 APPBP2Q92624 585 aa27.22■■□□□ 1.95
FOXA1-202ENST00000545425 TTC12Q9H892 705 aaPredicted RBP27.21■■□□□ 1.95
FOXA1-202ENST00000545425 NR1I2O75469 434 aa27.2■■□□□ 1.95
FOXA1-202ENST00000545425 CTDNEP1O95476 244 aa27.2■■□□□ 1.95
FOXA1-202ENST00000545425 APOBRQ0VD83 1088 aa27.2■■□□□ 1.95
FOXA1-202ENST00000545425 SARM1Q6SZW1 724 aa27.2■■□□□ 1.95
FOXA1-202ENST00000545425 DDX11Q96FC9 970 aa27.2■■□□□ 1.95
FOXA1-202ENST00000545425 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.2■■□□□ 1.95
FOXA1-202ENST00000545425 TMOD3Q9NYL9 352 aa27.2■■□□□ 1.95
FOXA1-202ENST00000545425 STARD3NLO95772 234 aa27.2■■□□□ 1.94
FOXA1-202ENST00000545425 HMGB2P26583 209 aaKnown RBP27.2■■□□□ 1.94
FOXA1-202ENST00000545425 CAMK4Q16566 473 aa27.2■■□□□ 1.94
FOXA1-202ENST00000545425 LRRC4BQ9NT99 713 aa27.2■■□□□ 1.94
FOXA1-202ENST00000545425 ZNF165P49910 485 aa27.19■■□□□ 1.94
FOXA1-202ENST00000545425 PLCB2Q00722 1185 aa27.19■■□□□ 1.94
FOXA1-202ENST00000545425 IFIT5Q13325 482 aaKnown RBP27.19■■□□□ 1.94
FOXA1-202ENST00000545425 STX1AQ16623 288 aa27.19■■□□□ 1.94
FOXA1-202ENST00000545425 TPRNQ4KMQ1 711 aa27.19■■□□□ 1.94
FOXA1-202ENST00000545425 PLA2G4DQ86XP0 818 aa27.19■■□□□ 1.94
FOXA1-202ENST00000545425 XAGE2Q96GT9 111 aa27.19■■□□□ 1.94
FOXA1-202ENST00000545425 AP5Z1O43299 807 aa27.18■■□□□ 1.94
FOXA1-202ENST00000545425 TTF1Q15361 905 aaPredicted RBP27.18■■□□□ 1.94
FOXA1-202ENST00000545425 LRP5O75197 1615 aa27.18■■□□□ 1.94
FOXA1-202ENST00000545425 A0A1W2PQ27 194 aa27.18■■□□□ 1.94
FOXA1-202ENST00000545425 A0A1W2PQ64 194 aa27.18■■□□□ 1.94
FOXA1-202ENST00000545425 A0A1W2PQD8 194 aa27.18■■□□□ 1.94
FOXA1-202ENST00000545425 FAM160A1Q05DH4 1040 aa27.18■■□□□ 1.94
FOXA1-202ENST00000545425 CHAF1AQ13111 956 aaPredicted RBP27.18■■□□□ 1.94
FOXA1-202ENST00000545425 TAF7LQ5H9L4 462 aa27.18■■□□□ 1.94
FOXA1-202ENST00000545425 MYH7P12883 1935 aa27.18■■□□□ 1.94
FOXA1-202ENST00000545425 CARMIL3Q8ND23 1372 aa27.18■■□□□ 1.94
FOXA1-202ENST00000545425 DDX60Q8IY21 1712 aaKnown RBP27.17■■□□□ 1.94
FOXA1-202ENST00000545425 TOGARAM1Q9Y4F4 1720 aa27.17■■□□□ 1.94
FOXA1-202ENST00000545425 M0R2C6 588 aa27.17■■□□□ 1.94
FOXA1-202ENST00000545425 NEMFO60524 1076 aa27.17■■□□□ 1.94
FOXA1-202ENST00000545425 ZNF75DP51815 510 aa27.17■■□□□ 1.94
FOXA1-202ENST00000545425 BRAPQ7Z569 592 aa27.17■■□□□ 1.94
FOXA1-202ENST00000545425 CKAP2LQ8IYA6 745 aa27.17■■□□□ 1.94
FOXA1-202ENST00000545425 SMARCC1Q92922 1105 aaPredicted RBP27.17■■□□□ 1.94
FOXA1-202ENST00000545425 RTEL1Q9NZ71 1219 aa27.17■■□□□ 1.94
FOXA1-202ENST00000545425 NCOA7Q8NI08 942 aa27.16■■□□□ 1.94
FOXA1-202ENST00000545425 OSBP2Q969R2 916 aa27.16■■□□□ 1.94
FOXA1-202ENST00000545425 ZNF594Q96JF6 807 aaPredicted RBP27.16■■□□□ 1.94
FOXA1-202ENST00000545425 CCNL1Q9UK58 526 aaPredicted RBP27.16■■□□□ 1.94
FOXA1-202ENST00000545425 MAP3K15Q6ZN16 1313 aa27.16■■□□□ 1.94
FOXA1-202ENST00000545425 KINO60870 393 aaKnown RBP27.16■■□□□ 1.94
FOXA1-202ENST00000545425 GIGYF2Q6Y7W6 1299 aaKnown RBP27.16■■□□□ 1.94
FOXA1-202ENST00000545425 LUZP1Q86V48 1076 aa27.16■■□□□ 1.94
FOXA1-202ENST00000545425 CCAR1Q8IX12 1150 aaKnown RBP27.16■■□□□ 1.94
FOXA1-202ENST00000545425 LRRC2Q9BYS8 371 aa27.16■■□□□ 1.94
FOXA1-202ENST00000545425 YEATS4O95619 227 aa27.15■■□□□ 1.94
FOXA1-202ENST00000545425 PIGBQ92521 554 aa27.15■■□□□ 1.94
FOXA1-202ENST00000545425 SPON1Q9HCB6 807 aa27.15■■□□□ 1.94
FOXA1-202ENST00000545425 ANO10Q9NW15 660 aa27.15■■□□□ 1.94
FOXA1-202ENST00000545425 GOLGA6L19H0YKK7 550 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms