RNA–Protein interactions for RNA: ENST00000545224.5

SRRM4-203, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-203ENST00000545224 PDE4AP27815 886 aa13.96□□□□□ -0.17
SRRM4-203ENST00000545224 ARID4AP29374 1257 aaPredicted RBP13.96□□□□□ -0.17
SRRM4-203ENST00000545224 CENPQQ7L2Z9 268 aaPredicted RBP13.96□□□□□ -0.17
SRRM4-203ENST00000545224 CCDC136Q96JN2 1154 aa13.96□□□□□ -0.17
SRRM4-203ENST00000545224 PRDM10Q9NQV6 1147 aa13.96□□□□□ -0.17
SRRM4-203ENST00000545224 ZNRF3Q9ULT6 936 aa13.96□□□□□ -0.17
SRRM4-203ENST00000545224 COL1A1P02452 1464 aaPredicted RBP13.95□□□□□ -0.18
SRRM4-203ENST00000545224 SCARF1Q14162 830 aa13.95□□□□□ -0.18
SRRM4-203ENST00000545224 ZNF804AQ7Z570 1209 aa13.95□□□□□ -0.18
SRRM4-203ENST00000545224 LNPKQ9C0E8 428 aa13.95□□□□□ -0.18
SRRM4-203ENST00000545224 MKRN1Q9UHC7 482 aaKnown RBP13.95□□□□□ -0.18
SRRM4-203ENST00000545224 AKAP11Q9UKA4 1901 aa13.95□□□□□ -0.18
SRRM4-203ENST00000545224 PSME4Q14997 1843 aa13.94□□□□□ -0.18
SRRM4-203ENST00000545224 FAM205AQ6ZU69 1335 aa13.94□□□□□ -0.18
SRRM4-203ENST00000545224 CXCL9Q07325 125 aa13.94□□□□□ -0.18
SRRM4-203ENST00000545224 CAVIN4Q5BKX8 364 aa13.94□□□□□ -0.18
SRRM4-203ENST00000545224 NIM1KQ8IY84 436 aa13.94□□□□□ -0.18
SRRM4-203ENST00000545224 STAP2Q9UGK3 403 aa13.94□□□□□ -0.18
SRRM4-203ENST00000545224 ZNF541Q9H0D2 1346 aa13.93□□□□□ -0.18
SRRM4-203ENST00000545224 IQCA1LA6NCM1 817 aa13.93□□□□□ -0.18
SRRM4-203ENST00000545224 VIL1P09327 827 aaKnown RBP13.93□□□□□ -0.18
SRRM4-203ENST00000545224 IFIT2P09913 472 aaKnown RBP13.93□□□□□ -0.18
SRRM4-203ENST00000545224 MCAMP43121 646 aa13.93□□□□□ -0.18
SRRM4-203ENST00000545224 RASGRF1Q13972 1273 aa13.93□□□□□ -0.18
SRRM4-203ENST00000545224 PLEKHM2Q8IWE5 1019 aa13.93□□□□□ -0.18
SRRM4-203ENST00000545224 PI4K2BQ8TCG2 481 aa13.93□□□□□ -0.18
SRRM4-203ENST00000545224 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.93□□□□□ -0.18
SRRM4-203ENST00000545224 JDP2Q8WYK2 163 aa13.93□□□□□ -0.18
SRRM4-203ENST00000545224 HMG20BQ9P0W2 317 aa13.93□□□□□ -0.18
SRRM4-203ENST00000545224 IQSEC3Q9UPP2 1182 aaPredicted RBP13.93□□□□□ -0.18
SRRM4-203ENST00000545224 PDS5AQ29RF7 1337 aaKnown RBP13.92□□□□□ -0.18
SRRM4-203ENST00000545224 SEMA3EO15041 775 aa13.92□□□□□ -0.18
SRRM4-203ENST00000545224 FOXN1O15353 648 aa13.92□□□□□ -0.18
SRRM4-203ENST00000545224 ATP5JP18859 108 aa13.92□□□□□ -0.18
SRRM4-203ENST00000545224 CTCFP49711 727 aaPredicted RBP13.92□□□□□ -0.18
SRRM4-203ENST00000545224 DACT2Q5SW24 774 aa13.92□□□□□ -0.18
SRRM4-203ENST00000545224 STRIP1Q5VSL9 837 aa13.92□□□□□ -0.18
SRRM4-203ENST00000545224 AIDAQ96BJ3 306 aa13.92□□□□□ -0.18
SRRM4-203ENST00000545224 GMLQ99445 158 aa13.92□□□□□ -0.18
SRRM4-203ENST00000545224 OSBPL3Q9H4L5 887 aa13.92□□□□□ -0.18
SRRM4-203ENST00000545224 PSMD14O00487 310 aa13.91□□□□□ -0.18
SRRM4-203ENST00000545224 DDNO94850 711 aaPredicted RBP13.91□□□□□ -0.18
SRRM4-203ENST00000545224 UQCRFS1P1P0C7P4 283 aa13.91□□□□□ -0.18
SRRM4-203ENST00000545224 PDE1AP54750 535 aa13.91□□□□□ -0.18
SRRM4-203ENST00000545224 GTF2IP78347 998 aa13.91□□□□□ -0.18
SRRM4-203ENST00000545224 CCDC158Q5M9N0 1113 aa13.91□□□□□ -0.18
SRRM4-203ENST00000545224 TTLL5Q6EMB2 1281 aa13.91□□□□□ -0.18
SRRM4-203ENST00000545224 PI16Q6UXB8 463 aa13.91□□□□□ -0.18
SRRM4-203ENST00000545224 SKAP1Q86WV1 359 aa13.91□□□□□ -0.18
SRRM4-203ENST00000545224 CERS5Q8N5B7 392 aa13.91□□□□□ -0.18
SRRM4-203ENST00000545224 ECHDC1Q9NTX5 307 aa13.91□□□□□ -0.18
SRRM4-203ENST00000545224 DENND2AQ9ULE3 1009 aa13.91□□□□□ -0.18
SRRM4-203ENST00000545224 CNTNAP1P78357 1384 aa13.91□□□□□ -0.18
SRRM4-203ENST00000545224 TTC41PQ6P2S7 1318 aa13.9□□□□□ -0.18
SRRM4-203ENST00000545224 USP17L3A6NCW0 530 aa13.9□□□□□ -0.18
SRRM4-203ENST00000545224 USP17L4A6NCW7 530 aa13.9□□□□□ -0.18
SRRM4-203ENST00000545224 RAD17O75943 681 aa13.9□□□□□ -0.18
SRRM4-203ENST00000545224 FKBP1AP62942 108 aaKnown RBP13.9□□□□□ -0.18
SRRM4-203ENST00000545224 GRIK5Q16478 980 aa13.9□□□□□ -0.18
SRRM4-203ENST00000545224 TTC39AQ5SRH9 613 aa13.9□□□□□ -0.18
SRRM4-203ENST00000545224 TSHZ3Q63HK5 1081 aa13.9□□□□□ -0.18
SRRM4-203ENST00000545224 CIAPIN1Q6FI81 312 aa13.9□□□□□ -0.18
SRRM4-203ENST00000545224 USP17L1Q7RTZ2 530 aa13.9□□□□□ -0.18
SRRM4-203ENST00000545224 LDHDQ86WU2 507 aa13.9□□□□□ -0.18
SRRM4-203ENST00000545224 VPS37DQ86XT2 251 aa13.9□□□□□ -0.18
SRRM4-203ENST00000545224 MXD3Q9BW11 206 aa13.9□□□□□ -0.18
SRRM4-203ENST00000545224 GNL3LQ9NVN8 582 aaKnown RBP13.9□□□□□ -0.18
SRRM4-203ENST00000545224 GTF3C3Q9Y5Q9 886 aa13.9□□□□□ -0.18
SRRM4-203ENST00000545224 PASKQ96RG2 1323 aa13.9□□□□□ -0.19
SRRM4-203ENST00000545224 SALL1Q9NSC2 1324 aa13.9□□□□□ -0.19
SRRM4-203ENST00000545224 TMEM88BA6NKF7 163 aa13.89□□□□□ -0.19
SRRM4-203ENST00000545224 CYP2E1P05181 493 aaPredicted RBP13.89□□□□□ -0.19
SRRM4-203ENST00000545224 POTEIP0CG38 1075 aa13.89□□□□□ -0.19
SRRM4-203ENST00000545224 POTEJP0CG39 1038 aa13.89□□□□□ -0.19
SRRM4-203ENST00000545224 MX1P20591 662 aa13.89□□□□□ -0.19
SRRM4-203ENST00000545224 EIF6P56537 245 aaKnown RBP13.89□□□□□ -0.19
SRRM4-203ENST00000545224 GORABQ5T7V8 394 aa13.89□□□□□ -0.19
SRRM4-203ENST00000545224 SPATA5Q8NB90 893 aa13.89□□□□□ -0.19
SRRM4-203ENST00000545224 JAG2Q9Y219 1238 aa13.89□□□□□ -0.19
SRRM4-203ENST00000545224 NDUFB9Q9Y6M9 179 aa13.89□□□□□ -0.19
SRRM4-203ENST00000545224 G3V3G9 751 aa13.88□□□□□ -0.19
SRRM4-203ENST00000545224 ZAP70P43403 619 aa13.88□□□□□ -0.19
SRRM4-203ENST00000545224 DCAF8Q5TAQ9 597 aa13.88□□□□□ -0.19
SRRM4-203ENST00000545224 RSBN1LQ6PCB5 846 aaPredicted RBP13.88□□□□□ -0.19
SRRM4-203ENST00000545224 GPC2Q8N158 579 aa13.88□□□□□ -0.19
SRRM4-203ENST00000545224 L3MBTL3Q96JM7 780 aaPredicted RBP13.88□□□□□ -0.19
SRRM4-203ENST00000545224 HAUS7Q99871 368 aa13.88□□□□□ -0.19
SRRM4-203ENST00000545224 BCL11AQ9H165 835 aa13.88□□□□□ -0.19
SRRM4-203ENST00000545224 BOLA2Q9H3K6 86 aa13.88□□□□□ -0.19
SRRM4-203ENST00000545224 ANTXR1Q9H6X2 564 aa13.88□□□□□ -0.19
SRRM4-203ENST00000545224 SNRKQ9NRH2 765 aa13.88□□□□□ -0.19
SRRM4-203ENST00000545224 ZBTB12Q9Y330 459 aaPredicted RBP13.88□□□□□ -0.19
SRRM4-203ENST00000545224 AOX1Q06278 1338 aa13.88□□□□□ -0.19
SRRM4-203ENST00000545224 ITGBL1O95965 494 aaPredicted RBP13.87□□□□□ -0.19
SRRM4-203ENST00000545224 VEGFBP49765 207 aa13.87□□□□□ -0.19
SRRM4-203ENST00000545224 SCNN1DP51172 638 aa13.87□□□□□ -0.19
SRRM4-203ENST00000545224 TNIP1Q15025 636 aa13.87□□□□□ -0.19
SRRM4-203ENST00000545224 AGBL3Q8NEM8 1001 aa13.87□□□□□ -0.19
SRRM4-203ENST00000545224 WDR66Q8TBY9 1149 aa13.87□□□□□ -0.19
SRRM4-203ENST00000545224 ZNF384Q8TF68 577 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms