RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 VPS37DQ86XT2 251 aa13.64□□□□□ -0.23
TNC-213ENST00000544972 NSFL1CQ9UNZ2 370 aaKnown RBP13.64□□□□□ -0.23
TNC-213ENST00000544972 MYH13Q9UKX3 1938 aa13.63□□□□□ -0.23
TNC-213ENST00000544972 PPEF1O14829 653 aaPredicted RBP13.63□□□□□ -0.23
TNC-213ENST00000544972 FOXP2O15409 715 aa13.63□□□□□ -0.23
TNC-213ENST00000544972 HSPD1P10809 573 aaKnown RBP13.63□□□□□ -0.23
TNC-213ENST00000544972 WASHC4Q2M389 1173 aa13.63□□□□□ -0.23
TNC-213ENST00000544972 ADCK5Q3MIX3 580 aa13.63□□□□□ -0.23
TNC-213ENST00000544972 C15orf52Q6ZUT6 534 aaKnown RBP13.63□□□□□ -0.23
TNC-213ENST00000544972 TMC4Q7Z404 712 aa13.63□□□□□ -0.23
TNC-213ENST00000544972 SP8Q8IXZ3 490 aa13.63□□□□□ -0.23
TNC-213ENST00000544972 MASTLQ96GX5 879 aa13.63□□□□□ -0.23
TNC-213ENST00000544972 DSCC1Q9BVC3 393 aa13.63□□□□□ -0.23
TNC-213ENST00000544972 PODXL2Q9NZ53 605 aa13.63□□□□□ -0.23
TNC-213ENST00000544972 DENND2AQ9ULE3 1009 aa13.63□□□□□ -0.23
TNC-213ENST00000544972 ZNF532Q9HCE3 1301 aa13.63□□□□□ -0.23
TNC-213ENST00000544972 K7ELQ4 463 aaPredicted RBP13.62□□□□□ -0.23
TNC-213ENST00000544972 SEMA3EO15041 775 aa13.62□□□□□ -0.23
TNC-213ENST00000544972 MAP3K12Q12852 859 aa13.62□□□□□ -0.23
TNC-213ENST00000544972 UPF3BQ9BZI7 483 aaKnown RBP13.62□□□□□ -0.23
TNC-213ENST00000544972 ATP6V0A2Q9Y487 856 aa13.62□□□□□ -0.23
TNC-213ENST00000544972 TAF6LQ9Y6J9 622 aa13.62□□□□□ -0.23
TNC-213ENST00000544972 PDS5AQ29RF7 1337 aaKnown RBP13.62□□□□□ -0.23
TNC-213ENST00000544972 ST18O60284 1047 aa13.62□□□□□ -0.23
TNC-213ENST00000544972 ATP2B4P23634 1241 aa13.62□□□□□ -0.23
TNC-213ENST00000544972 ALDH1B1P30837 517 aa13.62□□□□□ -0.23
TNC-213ENST00000544972 TSGA10IPQ3SY00 556 aa13.62□□□□□ -0.23
TNC-213ENST00000544972 GPR101Q96P66 508 aaPredicted RBP13.62□□□□□ -0.23
TNC-213ENST00000544972 POLLQ9UGP5 575 aa13.62□□□□□ -0.23
TNC-213ENST00000544972 U3KPZ7 1027 aaPredicted RBP13.62□□□□□ -0.23
TNC-213ENST00000544972 GPAA1O43292 621 aa13.61□□□□□ -0.23
TNC-213ENST00000544972 UFL1O94874 794 aa13.61□□□□□ -0.23
TNC-213ENST00000544972 MAGEB6Q8N7X4 407 aa13.61□□□□□ -0.23
TNC-213ENST00000544972 SLC16A10Q8TF71 515 aa13.61□□□□□ -0.23
TNC-213ENST00000544972 GGA1Q9UJY5 639 aa13.61□□□□□ -0.23
TNC-213ENST00000544972 CACNA1SQ13698 1873 aa13.61□□□□□ -0.23
TNC-213ENST00000544972 RPAP1Q9BWH6 1393 aaPredicted RBP13.6□□□□□ -0.23
TNC-213ENST00000544972 ZKSCAN1P17029 563 aaPredicted RBP13.6□□□□□ -0.23
TNC-213ENST00000544972 COL9A3Q14050 684 aaPredicted RBP13.6□□□□□ -0.23
TNC-213ENST00000544972 RNF20Q5VTR2 975 aa13.6□□□□□ -0.23
TNC-213ENST00000544972 OLFM4Q6UX06 510 aa13.6□□□□□ -0.23
TNC-213ENST00000544972 C2CD5Q86YS7 1000 aa13.6□□□□□ -0.23
TNC-213ENST00000544972 TBC1D16Q8TBP0 767 aa13.6□□□□□ -0.23
TNC-213ENST00000544972 TTC14Q96N46 770 aa13.6□□□□□ -0.23
TNC-213ENST00000544972 TM6SF1Q9BZW5 370 aa13.6□□□□□ -0.23
TNC-213ENST00000544972 LRP2BPQ9P2M1 347 aa13.6□□□□□ -0.23
TNC-213ENST00000544972 DUOX1Q9NRD9 1551 aa13.6□□□□□ -0.23
TNC-213ENST00000544972 CYP21A2P08686 494 aa13.6□□□□□ -0.23
TNC-213ENST00000544972 SPRYD3Q8NCJ5 442 aa13.6□□□□□ -0.23
TNC-213ENST00000544972 TDRD7Q8NHU6 1098 aaKnown RBP13.6□□□□□ -0.23
TNC-213ENST00000544972 ZSWIM6Q9HCJ5 1215 aa13.6□□□□□ -0.23
TNC-213ENST00000544972 ABCF2Q9UG63 623 aa13.6□□□□□ -0.23
TNC-213ENST00000544972 A0A0G2JLW4 131 aa13.59□□□□□ -0.23
TNC-213ENST00000544972 H0YIN7 160 aa13.59□□□□□ -0.23
TNC-213ENST00000544972 CPA1P15085 419 aa13.59□□□□□ -0.23
TNC-213ENST00000544972 CASTP20810 708 aaKnown RBP13.59□□□□□ -0.23
TNC-213ENST00000544972 CHRNA5P30532 468 aa13.59□□□□□ -0.23
TNC-213ENST00000544972 STYK1Q6J9G0 422 aa13.59□□□□□ -0.23
TNC-213ENST00000544972 IL27Q8NEV9 243 aa13.59□□□□□ -0.23
TNC-213ENST00000544972 ZNF384Q8TF68 577 aa13.59□□□□□ -0.23
TNC-213ENST00000544972 ZNF622Q969S3 477 aaKnown RBP eCLIP13.59□□□□□ -0.23
TNC-213ENST00000544972 JAKMIP1Q96N16 626 aaKnown RBP13.59□□□□□ -0.23
TNC-213ENST00000544972 SLKQ9H2G2 1235 aaPredicted RBP13.59□□□□□ -0.23
TNC-213ENST00000544972 SLX4Q8IY92 1834 aa13.59□□□□□ -0.23
TNC-213ENST00000544972 C10orf71Q711Q0 1435 aa13.58□□□□□ -0.23
TNC-213ENST00000544972 FRAT2O75474 233 aaPredicted RBP13.58□□□□□ -0.24
TNC-213ENST00000544972 ZNF804AQ7Z570 1209 aa13.58□□□□□ -0.24
TNC-213ENST00000544972 ADGRA1Q86SQ6 560 aa13.58□□□□□ -0.24
TNC-213ENST00000544972 STRBPQ96SI9 672 aaKnown RBP13.58□□□□□ -0.24
TNC-213ENST00000544972 TTLL5Q6EMB2 1281 aa13.57□□□□□ -0.24
TNC-213ENST00000544972 ERICH6Q7L0X2 663 aa13.57□□□□□ -0.24
TNC-213ENST00000544972 CD209Q9NNX6 404 aa13.57□□□□□ -0.24
TNC-213ENST00000544972 FGAP02671 866 aa13.57□□□□□ -0.24
TNC-213ENST00000544972 IL1R1P14778 569 aa13.57□□□□□ -0.24
TNC-213ENST00000544972 DDIT3P35638 169 aa13.57□□□□□ -0.24
TNC-213ENST00000544972 MCM2P49736 904 aa13.57□□□□□ -0.24
TNC-213ENST00000544972 CHAF1AQ13111 956 aaPredicted RBP13.57□□□□□ -0.24
TNC-213ENST00000544972 STOX1Q6ZVD7 989 aa13.57□□□□□ -0.24
TNC-213ENST00000544972 RUFY3Q7L099 469 aa13.57□□□□□ -0.24
TNC-213ENST00000544972 RAI14Q9P0K7 980 aa13.57□□□□□ -0.24
TNC-213ENST00000544972 C6orf229H3BNL8 230 aa13.56□□□□□ -0.24
TNC-213ENST00000544972 MBD4O95243 580 aa13.56□□□□□ -0.24
TNC-213ENST00000544972 CYP7A1P22680 504 aa13.56□□□□□ -0.24
TNC-213ENST00000544972 PSMA5P28066 241 aa13.56□□□□□ -0.24
TNC-213ENST00000544972 PRDX5P30044 214 aa13.56□□□□□ -0.24
TNC-213ENST00000544972 MPNDQ8N594 471 aa13.56□□□□□ -0.24
TNC-213ENST00000544972 UPF1Q92900 1129 aaKnown RBP eCLIP13.56□□□□□ -0.24
TNC-213ENST00000544972 AIDAQ96BJ3 306 aa13.56□□□□□ -0.24
TNC-213ENST00000544972 NSUN4Q96CB9 384 aaKnown RBP13.56□□□□□ -0.24
TNC-213ENST00000544972 TMX3Q96JJ7 454 aa13.56□□□□□ -0.24
TNC-213ENST00000544972 JAG2Q9Y219 1238 aa13.56□□□□□ -0.24
TNC-213ENST00000544972 CYP46A1Q9Y6A2 500 aa13.56□□□□□ -0.24
TNC-213ENST00000544972 SALL1Q9NSC2 1324 aa13.56□□□□□ -0.24
TNC-213ENST00000544972 DLEC1Q9Y238 1755 aa13.56□□□□□ -0.24
TNC-213ENST00000544972 LAMA4Q16363 1823 aa13.56□□□□□ -0.24
TNC-213ENST00000544972 CCDC88AQ3V6T2 1871 aa13.55□□□□□ -0.24
TNC-213ENST00000544972 KRT32Q14532 448 aa13.55□□□□□ -0.24
TNC-213ENST00000544972 LCORLQ8N3X6 602 aa13.55□□□□□ -0.24
TNC-213ENST00000544972 C7orf43Q8WVR3 580 aa13.55□□□□□ -0.24
TNC-213ENST00000544972 ARMT1Q9H993 441 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms