RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 TTC41PQ6P2S7 1318 aa16.03■□□□□ 0.16
DDX11-227ENST00000544652 SEMA3EO15041 775 aa16.03■□□□□ 0.16
DDX11-227ENST00000544652 ECE2O60344 883 aa16.03■□□□□ 0.16
DDX11-227ENST00000544652 ECM2O94769 699 aaPredicted RBP16.03■□□□□ 0.16
DDX11-227ENST00000544652 PDE4AP27815 886 aa16.03■□□□□ 0.16
DDX11-227ENST00000544652 CCDC158Q5M9N0 1113 aa16.03■□□□□ 0.16
DDX11-227ENST00000544652 OTUD7AQ8TE49 926 aaPredicted RBP16.03■□□□□ 0.16
DDX11-227ENST00000544652 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.03■□□□□ 0.16
DDX11-227ENST00000544652 STAP2Q9UGK3 403 aa16.03■□□□□ 0.16
DDX11-227ENST00000544652 SRCAPQ6ZRS2 3230 aa16.02■□□□□ 0.16
DDX11-227ENST00000544652 PDS5AQ29RF7 1337 aaKnown RBP16.02■□□□□ 0.16
DDX11-227ENST00000544652 YDJCA8MPS7 323 aa16.02■□□□□ 0.16
DDX11-227ENST00000544652 FZD9O00144 591 aa16.02■□□□□ 0.16
DDX11-227ENST00000544652 UQCRFS1P1P0C7P4 283 aa16.02■□□□□ 0.16
DDX11-227ENST00000544652 DOK7Q18PE1 504 aa16.02■□□□□ 0.16
DDX11-227ENST00000544652 GORABQ5T7V8 394 aa16.02■□□□□ 0.16
DDX11-227ENST00000544652 NIM1KQ8IY84 436 aa16.02■□□□□ 0.16
DDX11-227ENST00000544652 OSBPL3Q9H4L5 887 aa16.02■□□□□ 0.16
DDX11-227ENST00000544652 DBNDD1Q9H9R9 158 aa16.02■□□□□ 0.16
DDX11-227ENST00000544652 ECHDC1Q9NTX5 307 aa16.02■□□□□ 0.16
DDX11-227ENST00000544652 ZNRF3Q9ULT6 936 aa16.02■□□□□ 0.16
DDX11-227ENST00000544652 SCN4AP35499 1836 aa16.01■□□□□ 0.15
DDX11-227ENST00000544652 FAM205AQ6ZU69 1335 aa16.01■□□□□ 0.15
DDX11-227ENST00000544652 ATP5JP18859 108 aa16.01■□□□□ 0.15
DDX11-227ENST00000544652 MX1P20591 662 aa16.01■□□□□ 0.15
DDX11-227ENST00000544652 VPS37DQ86XT2 251 aa16.01■□□□□ 0.15
DDX11-227ENST00000544652 PLEKHM2Q8IWE5 1019 aa16.01■□□□□ 0.15
DDX11-227ENST00000544652 JDP2Q8WYK2 163 aa16.01■□□□□ 0.15
DDX11-227ENST00000544652 GNL3LQ9NVN8 582 aaKnown RBP16.01■□□□□ 0.15
DDX11-227ENST00000544652 AOX1Q06278 1338 aa16■□□□□ 0.15
DDX11-227ENST00000544652 ZC3H4Q9UPT8 1303 aaKnown RBP16■□□□□ 0.15
DDX11-227ENST00000544652 CDK5RAP2Q96SN8 1893 aa16■□□□□ 0.15
DDX11-227ENST00000544652 G3V3G9 751 aa16■□□□□ 0.15
DDX11-227ENST00000544652 MCAMP43121 646 aa16■□□□□ 0.15
DDX11-227ENST00000544652 PDE1AP54750 535 aa16■□□□□ 0.15
DDX11-227ENST00000544652 TTC39AQ5SRH9 613 aa16■□□□□ 0.15
DDX11-227ENST00000544652 DCAF8Q5TAQ9 597 aa16■□□□□ 0.15
DDX11-227ENST00000544652 PI4K2BQ8TCG2 481 aa16■□□□□ 0.15
DDX11-227ENST00000544652 RNF181Q9P0P0 153 aa16■□□□□ 0.15
DDX11-227ENST00000544652 DENND2AQ9ULE3 1009 aa16■□□□□ 0.15
DDX11-227ENST00000544652 RASGRF1Q13972 1273 aa15.99■□□□□ 0.15
DDX11-227ENST00000544652 SCARF1Q14162 830 aa15.99■□□□□ 0.15
DDX11-227ENST00000544652 C9orf131Q5VYM1 1079 aa15.99■□□□□ 0.15
DDX11-227ENST00000544652 GPATCH3Q96I76 525 aa15.99■□□□□ 0.15
DDX11-227ENST00000544652 BCL11AQ9H165 835 aa15.99■□□□□ 0.15
DDX11-227ENST00000544652 HMG20BQ9P0W2 317 aa15.99■□□□□ 0.15
DDX11-227ENST00000544652 ADAMTSL1Q8N6G6 1762 aa15.99■□□□□ 0.15
DDX11-227ENST00000544652 WDR90Q96KV7 1748 aa15.99■□□□□ 0.15
DDX11-227ENST00000544652 SALL1Q9NSC2 1324 aa15.98■□□□□ 0.15
DDX11-227ENST00000544652 SPDYE2BA6NHP3 402 aa15.98■□□□□ 0.15
DDX11-227ENST00000544652 SPDYE6P0CI01 402 aa15.98■□□□□ 0.15
DDX11-227ENST00000544652 FKBP1AP62942 108 aaKnown RBP15.98■□□□□ 0.15
DDX11-227ENST00000544652 SPDYE2Q495Y8 402 aa15.98■□□□□ 0.15
DDX11-227ENST00000544652 STRIP1Q5VSL9 837 aa15.98■□□□□ 0.15
DDX11-227ENST00000544652 SPATA5Q8NB90 893 aa15.98■□□□□ 0.15
DDX11-227ENST00000544652 KCNQ5Q9NR82 932 aa15.98■□□□□ 0.15
DDX11-227ENST00000544652 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.98■□□□□ 0.15
DDX11-227ENST00000544652 IQSEC3Q9UPP2 1182 aaPredicted RBP15.98■□□□□ 0.15
DDX11-227ENST00000544652 FOCADQ5VW36 1801 aa15.97■□□□□ 0.15
DDX11-227ENST00000544652 ERC2O15083 957 aa15.97■□□□□ 0.15
DDX11-227ENST00000544652 GLRX3O76003 335 aaKnown RBP15.97■□□□□ 0.15
DDX11-227ENST00000544652 CXCL9Q07325 125 aa15.97■□□□□ 0.15
DDX11-227ENST00000544652 HAUS7Q99871 368 aa15.97■□□□□ 0.15
DDX11-227ENST00000544652 USP17L3A6NCW0 530 aa15.96■□□□□ 0.15
DDX11-227ENST00000544652 USP17L4A6NCW7 530 aa15.96■□□□□ 0.15
DDX11-227ENST00000544652 VIL1P09327 827 aaKnown RBP15.96■□□□□ 0.15
DDX11-227ENST00000544652 GTF2IP78347 998 aa15.96■□□□□ 0.15
DDX11-227ENST00000544652 DACT2Q5SW24 774 aa15.96■□□□□ 0.15
DDX11-227ENST00000544652 TSHZ3Q63HK5 1081 aa15.96■□□□□ 0.15
DDX11-227ENST00000544652 TTLL5Q6EMB2 1281 aa15.96■□□□□ 0.15
DDX11-227ENST00000544652 PI16Q6UXB8 463 aa15.96■□□□□ 0.15
DDX11-227ENST00000544652 USP17L1Q7RTZ2 530 aa15.96■□□□□ 0.15
DDX11-227ENST00000544652 WDR66Q8TBY9 1149 aa15.96■□□□□ 0.15
DDX11-227ENST00000544652 ZNF541Q9H0D2 1346 aa15.95■□□□□ 0.14
DDX11-227ENST00000544652 FRAT2O75474 233 aaPredicted RBP15.95■□□□□ 0.14
DDX11-227ENST00000544652 DSG3P32926 999 aa15.95■□□□□ 0.14
DDX11-227ENST00000544652 EIF6P56537 245 aaKnown RBP15.95■□□□□ 0.14
DDX11-227ENST00000544652 CIAPIN1Q6FI81 312 aa15.95■□□□□ 0.14
DDX11-227ENST00000544652 TBC1D22AQ8WUA7 517 aa15.95■□□□□ 0.14
DDX11-227ENST00000544652 BOLA2Q9H3K6 86 aa15.95■□□□□ 0.14
DDX11-227ENST00000544652 PSMD14O00487 310 aa15.94■□□□□ 0.14
DDX11-227ENST00000544652 IGSF3O75054 1194 aa15.94■□□□□ 0.14
DDX11-227ENST00000544652 RAD17O75943 681 aa15.94■□□□□ 0.14
DDX11-227ENST00000544652 CYP2E1P05181 493 aaPredicted RBP15.94■□□□□ 0.14
DDX11-227ENST00000544652 ZAP70P43403 619 aa15.94■□□□□ 0.14
DDX11-227ENST00000544652 TNIP1Q15025 636 aa15.94■□□□□ 0.14
DDX11-227ENST00000544652 SKAP1Q86WV1 359 aa15.94■□□□□ 0.14
DDX11-227ENST00000544652 MYO3BQ8WXR4 1341 aa15.94■□□□□ 0.14
DDX11-227ENST00000544652 POLR2AP24928 1970 aaKnown RBP15.93■□□□□ 0.14
DDX11-227ENST00000544652 CHAF1AQ13111 956 aaPredicted RBP15.93■□□□□ 0.14
DDX11-227ENST00000544652 TTC22Q5TAA0 569 aa15.93■□□□□ 0.14
DDX11-227ENST00000544652 RSBN1LQ6PCB5 846 aaPredicted RBP15.93■□□□□ 0.14
DDX11-227ENST00000544652 GPC2Q8N158 579 aa15.93■□□□□ 0.14
DDX11-227ENST00000544652 ZGPATQ8N5A5 531 aaKnown RBP15.93■□□□□ 0.14
DDX11-227ENST00000544652 CERS5Q8N5B7 392 aa15.93■□□□□ 0.14
DDX11-227ENST00000544652 GMLQ99445 158 aa15.93■□□□□ 0.14
DDX11-227ENST00000544652 SNRKQ9NRH2 765 aa15.93■□□□□ 0.14
DDX11-227ENST00000544652 SUGT1Q9Y2Z0 365 aa15.93■□□□□ 0.14
DDX11-227ENST00000544652 NDUFB9Q9Y6M9 179 aa15.93■□□□□ 0.14
DDX11-227ENST00000544652 TTF1Q15361 905 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms