RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 ZPR1O75312 459 aa17.73■□□□□ 0.43
CHFR-223ENST00000544268 A0A0G2JLW4 131 aa17.72■□□□□ 0.43
CHFR-223ENST00000544268 PTMAP06454 111 aaKnown RBP17.72■□□□□ 0.43
CHFR-223ENST00000544268 ZKSCAN1P17029 563 aaPredicted RBP17.72■□□□□ 0.43
CHFR-223ENST00000544268 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.72■□□□□ 0.43
CHFR-223ENST00000544268 ANKRD18BA2A2Z9 1011 aa17.72■□□□□ 0.43
CHFR-223ENST00000544268 SLC27A3Q5K4L6 730 aa17.72■□□□□ 0.43
CHFR-223ENST00000544268 CDC37L1Q7L3B6 337 aa17.72■□□□□ 0.43
CHFR-223ENST00000544268 LRRC2Q9BYS8 371 aa17.72■□□□□ 0.43
CHFR-223ENST00000544268 TSPY26PQ9H489 355 aa17.72■□□□□ 0.43
CHFR-223ENST00000544268 MED23Q9ULK4 1368 aa17.72■□□□□ 0.43
CHFR-223ENST00000544268 DDX60Q8IY21 1712 aaKnown RBP17.72■□□□□ 0.43
CHFR-223ENST00000544268 RGL2O15211 777 aa17.71■□□□□ 0.43
CHFR-223ENST00000544268 TAF5LO75529 589 aa17.71■□□□□ 0.43
CHFR-223ENST00000544268 TOB2Q14106 344 aaPredicted RBP17.71■□□□□ 0.43
CHFR-223ENST00000544268 KIF3AQ9Y496 699 aa17.71■□□□□ 0.43
CHFR-223ENST00000544268 PPFIA3O75145 1194 aa17.71■□□□□ 0.43
CHFR-223ENST00000544268 TIMM10P62072 90 aa17.71■□□□□ 0.43
CHFR-223ENST00000544268 TRAPPC3LQ5T215 181 aa17.71■□□□□ 0.43
CHFR-223ENST00000544268 POTEAQ6S8J7 498 aa17.71■□□□□ 0.43
CHFR-223ENST00000544268 PROM2Q8N271 834 aa17.71■□□□□ 0.43
CHFR-223ENST00000544268 FBXO3Q9UK99 471 aa17.71■□□□□ 0.43
CHFR-223ENST00000544268 C4AP0C0L4 1744 aa17.71■□□□□ 0.42
CHFR-223ENST00000544268 RFC4P35249 363 aa17.7■□□□□ 0.42
CHFR-223ENST00000544268 PIBF1Q8WXW3 757 aa17.7■□□□□ 0.42
CHFR-223ENST00000544268 TM6SF1Q9BZW5 370 aa17.7■□□□□ 0.42
CHFR-223ENST00000544268 VGLL3A8MV65 326 aa17.7■□□□□ 0.42
CHFR-223ENST00000544268 ZNF609O15014 1411 aa17.7■□□□□ 0.42
CHFR-223ENST00000544268 ERFEQ4G0M1 354 aa17.7■□□□□ 0.42
CHFR-223ENST00000544268 GIMAP6Q6P9H5 292 aa17.7■□□□□ 0.42
CHFR-223ENST00000544268 LDHAL6AQ6ZMR3 332 aa17.7■□□□□ 0.42
CHFR-223ENST00000544268 TSC1Q92574 1164 aa17.7■□□□□ 0.42
CHFR-223ENST00000544268 NEUROD6Q96NK8 337 aa17.7■□□□□ 0.42
CHFR-223ENST00000544268 GPR108Q9NPR9 543 aa17.7■□□□□ 0.42
CHFR-223ENST00000544268 CEP126Q9P2H0 1117 aa17.7■□□□□ 0.42
CHFR-223ENST00000544268 TXNRD1Q16881 649 aa17.69■□□□□ 0.42
CHFR-223ENST00000544268 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.69■□□□□ 0.42
CHFR-223ENST00000544268 BLOC1S2Q6QNY1 142 aa17.69■□□□□ 0.42
CHFR-223ENST00000544268 SETDB2Q96T68 719 aa17.69■□□□□ 0.42
CHFR-223ENST00000544268 RIPOR2Q9Y4F9 1068 aa17.69■□□□□ 0.42
CHFR-223ENST00000544268 JAK2O60674 1132 aa17.68■□□□□ 0.42
CHFR-223ENST00000544268 NOLC1Q14978 699 aaKnown RBP eCLIP17.68■□□□□ 0.42
CHFR-223ENST00000544268 TMEM87AQ8NBN3 555 aa17.68■□□□□ 0.42
CHFR-223ENST00000544268 SEC31BQ9NQW1 1179 aa17.68■□□□□ 0.42
CHFR-223ENST00000544268 UBR3Q6ZT12 1888 aa17.68■□□□□ 0.42
CHFR-223ENST00000544268 LAMB2P55268 1798 aa17.68■□□□□ 0.42
CHFR-223ENST00000544268 A0A1B0GUL7 405 aa17.68■□□□□ 0.42
CHFR-223ENST00000544268 RPS6KB1P23443 525 aa17.68■□□□□ 0.42
CHFR-223ENST00000544268 CNNM1Q9NRU3 951 aa17.68■□□□□ 0.42
CHFR-223ENST00000544268 RIC1Q4ADV7 1423 aa17.67■□□□□ 0.42
CHFR-223ENST00000544268 ATP5JP18859 108 aa17.67■□□□□ 0.42
CHFR-223ENST00000544268 LARP1BQ659C4 914 aaKnown RBP17.67■□□□□ 0.42
CHFR-223ENST00000544268 SNRKQ9NRH2 765 aa17.67■□□□□ 0.42
CHFR-223ENST00000544268 APBA3O96018 575 aa17.67■□□□□ 0.42
CHFR-223ENST00000544268 HSP90B1P14625 803 aaKnown RBP17.67■□□□□ 0.42
CHFR-223ENST00000544268 CCDC152Q4G0S7 254 aa17.67■□□□□ 0.42
CHFR-223ENST00000544268 C3orf67Q6ZVT6 689 aa17.67■□□□□ 0.42
CHFR-223ENST00000544268 USP25Q9UHP3 1055 aa17.67■□□□□ 0.42
CHFR-223ENST00000544268 METTL24Q5JXM2 366 aa17.66■□□□□ 0.42
CHFR-223ENST00000544268 PDCL2Q8N4E4 241 aa17.66■□□□□ 0.42
CHFR-223ENST00000544268 DDX11Q96FC9 970 aa17.66■□□□□ 0.42
CHFR-223ENST00000544268 SH2B1Q9NRF2 756 aaPredicted RBP17.66■□□□□ 0.42
CHFR-223ENST00000544268 TFIP11Q9UBB9 837 aaKnown RBP17.66■□□□□ 0.42
CHFR-223ENST00000544268 ABCC12Q96J65 1359 aa17.66■□□□□ 0.42
CHFR-223ENST00000544268 HIP1O00291 1037 aa17.66■□□□□ 0.42
CHFR-223ENST00000544268 GOLIM4O00461 696 aa17.66■□□□□ 0.42
CHFR-223ENST00000544268 CYP21A2P08686 494 aa17.66■□□□□ 0.42
CHFR-223ENST00000544268 ADRA2BP18089 450 aa17.66■□□□□ 0.42
CHFR-223ENST00000544268 FOSBP53539 338 aa17.66■□□□□ 0.42
CHFR-223ENST00000544268 UBE2HP62256 183 aa17.66■□□□□ 0.42
CHFR-223ENST00000544268 NBPF5PQ86XG9 351 aaPredicted RBP17.66■□□□□ 0.42
CHFR-223ENST00000544268 COL24A1Q17RW2 1714 aa17.65■□□□□ 0.42
CHFR-223ENST00000544268 CCDC183Q5T5S1 534 aa17.65■□□□□ 0.42
CHFR-223ENST00000544268 STOX1Q6ZVD7 989 aa17.65■□□□□ 0.42
CHFR-223ENST00000544268 TTC6Q86TZ1 520 aa17.65■□□□□ 0.42
CHFR-223ENST00000544268 ZSCAN31Q96LW9 406 aaPredicted RBP17.65■□□□□ 0.42
CHFR-223ENST00000544268 SYAP1Q96A49 352 aaPredicted RBP17.64■□□□□ 0.42
CHFR-223ENST00000544268 AKAP2Q9Y2D5 859 aa17.64■□□□□ 0.42
CHFR-223ENST00000544268 LRP5O75197 1615 aa17.64■□□□□ 0.42
CHFR-223ENST00000544268 PLSCR1O15162 318 aa17.64■□□□□ 0.41
CHFR-223ENST00000544268 ADORA1P30542 326 aa17.64■□□□□ 0.41
CHFR-223ENST00000544268 CCDC24Q8N4L8 307 aa17.64■□□□□ 0.41
CHFR-223ENST00000544268 VGLL2Q8N8G2 317 aa17.64■□□□□ 0.41
CHFR-223ENST00000544268 NYXQ9GZU5 481 aa17.64■□□□□ 0.41
CHFR-223ENST00000544268 SPTLC3Q9NUV7 552 aa17.64■□□□□ 0.41
CHFR-223ENST00000544268 RTL9Q8NET4 1388 aa17.64■□□□□ 0.41
CHFR-223ENST00000544268 CAMK4Q16566 473 aa17.63■□□□□ 0.41
CHFR-223ENST00000544268 COL4A1P02462 1669 aa17.63■□□□□ 0.41
CHFR-223ENST00000544268 PSMA5P28066 241 aa17.63■□□□□ 0.41
CHFR-223ENST00000544268 SLC10A5Q5PT55 438 aa17.63■□□□□ 0.41
CHFR-223ENST00000544268 CHST3Q7LGC8 479 aa17.63■□□□□ 0.41
CHFR-223ENST00000544268 HOMEZQ8IX15 550 aa17.63■□□□□ 0.41
CHFR-223ENST00000544268 XAGE2Q96GT9 111 aa17.63■□□□□ 0.41
CHFR-223ENST00000544268 HAUS7Q99871 368 aa17.63■□□□□ 0.41
CHFR-223ENST00000544268 SPDYE4A6NLX3 237 aa17.62■□□□□ 0.41
CHFR-223ENST00000544268 AP5Z1O43299 807 aa17.62■□□□□ 0.41
CHFR-223ENST00000544268 LIG1P18858 919 aa17.62■□□□□ 0.41
CHFR-223ENST00000544268 NFIXQ14938 502 aa17.62■□□□□ 0.41
CHFR-223ENST00000544268 RNF20Q5VTR2 975 aa17.62■□□□□ 0.41
CHFR-223ENST00000544268 Q6ZUG5 572 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms