RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 KIAA0825Q8IV33 1275 aa27.01■■□□□ 1.91
OTUB1-212ENST00000543988 ZC3H15Q8WU90 426 aaKnown RBP27.01■■□□□ 1.91
OTUB1-212ENST00000543988 PGAP2Q9UHJ9 254 aa27.01■■□□□ 1.91
OTUB1-212ENST00000543988 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.01■■□□□ 1.91
OTUB1-212ENST00000543988 RRP1P56182 461 aaKnown RBP27■■□□□ 1.91
OTUB1-212ENST00000543988 MYOZ2Q9NPC6 264 aa27■■□□□ 1.91
OTUB1-212ENST00000543988 HTRA3P83110 453 aa26.99■■□□□ 1.91
OTUB1-212ENST00000543988 G3BP1Q13283 466 aaKnown RBP eCLIP26.99■■□□□ 1.914e-7■■□□□ 14.4
OTUB1-212ENST00000543988 ASTN2O75129 1339 aaPredicted RBP26.98■■□□□ 1.91
OTUB1-212ENST00000543988 ADORA1P30542 326 aa26.98■■□□□ 1.91
OTUB1-212ENST00000543988 FKBP1AP62942 108 aaKnown RBP26.98■■□□□ 1.91
OTUB1-212ENST00000543988 OGFOD1Q8N543 542 aa26.98■■□□□ 1.91
OTUB1-212ENST00000543988 CHAF1AQ13111 956 aaPredicted RBP26.97■■□□□ 1.91
OTUB1-212ENST00000543988 GLIS2Q9BZE0 524 aaPredicted RBP26.97■■□□□ 1.91
OTUB1-212ENST00000543988 COL1A1P02452 1464 aaPredicted RBP26.96■■□□□ 1.91
OTUB1-212ENST00000543988 CEP350Q5VT06 3117 aa26.96■■□□□ 1.91
OTUB1-212ENST00000543988 TRAF5O00463 557 aa26.96■■□□□ 1.91
OTUB1-212ENST00000543988 FRAT2O75474 233 aaPredicted RBP26.96■■□□□ 1.91
OTUB1-212ENST00000543988 SURF6O75683 361 aaKnown RBP26.96■■□□□ 1.91
OTUB1-212ENST00000543988 FMR1Q06787 632 aaKnown RBP eCLIP26.96■■□□□ 1.912e-22■■□□□ 13.5
OTUB1-212ENST00000543988 MFSD14BQ5SR56 506 aa26.96■■□□□ 1.91
OTUB1-212ENST00000543988 CHMP4BQ9H444 224 aaKnown RBP26.96■■□□□ 1.91
OTUB1-212ENST00000543988 GGA3Q9NZ52 723 aa26.96■■□□□ 1.91
OTUB1-212ENST00000543988 A0A1B0GUL7 405 aa26.95■■□□□ 1.9
OTUB1-212ENST00000543988 F8W031 263 aaPredicted RBP26.95■■□□□ 1.9
OTUB1-212ENST00000543988 TIMM10P62072 90 aa26.95■■□□□ 1.9
OTUB1-212ENST00000543988 OS9Q13438 667 aaPredicted RBP26.95■■□□□ 1.9
OTUB1-212ENST00000543988 AKAP2Q9Y2D5 859 aa26.95■■□□□ 1.9
OTUB1-212ENST00000543988 NOP58Q9Y2X3 529 aaKnown RBP26.95■■□□□ 1.9
OTUB1-212ENST00000543988 PHKA1P46020 1223 aa26.94■■□□□ 1.9
OTUB1-212ENST00000543988 SCARF1Q14162 830 aa26.94■■□□□ 1.9
OTUB1-212ENST00000543988 HDAC9Q9UKV0 1011 aa26.94■■□□□ 1.9
OTUB1-212ENST00000543988 MMP14P50281 582 aa26.93■■□□□ 1.9
OTUB1-212ENST00000543988 SIRT2Q8IXJ6 389 aa26.93■■□□□ 1.9
OTUB1-212ENST00000543988 ARAP2Q8WZ64 1704 aa26.93■■□□□ 1.9
OTUB1-212ENST00000543988 NBPF9Q3BBW0 867 aa26.92■■□□□ 1.9
OTUB1-212ENST00000543988 RPAP2Q8IXW5 612 aaPredicted RBP26.92■■□□□ 1.9
OTUB1-212ENST00000543988 GRIK5Q16478 980 aa26.91■■□□□ 1.9
OTUB1-212ENST00000543988 ANGEL2Q5VTE6 544 aaKnown RBP26.91■■□□□ 1.9
OTUB1-212ENST00000543988 CCDC102BQ68D86 513 aa26.91■■□□□ 1.9
OTUB1-212ENST00000543988 CDC37L1Q7L3B6 337 aa26.91■■□□□ 1.9
OTUB1-212ENST00000543988 KRT26Q7Z3Y9 468 aa26.91■■□□□ 1.9
OTUB1-212ENST00000543988 USP48Q86UV5 1035 aa26.91■■□□□ 1.9
OTUB1-212ENST00000543988 DCPSQ96C86 337 aaKnown RBP26.91■■□□□ 1.9
OTUB1-212ENST00000543988 XAGE2Q96GT9 111 aa26.91■■□□□ 1.9
OTUB1-212ENST00000543988 ZBED3Q96IU2 234 aaPredicted RBP26.91■■□□□ 1.9
OTUB1-212ENST00000543988 GNL3LQ9NVN8 582 aaKnown RBP26.91■■□□□ 1.9
OTUB1-212ENST00000543988 ADM5C9JUS6 153 aa26.9■■□□□ 1.9
OTUB1-212ENST00000543988 WNT10BO00744 389 aa26.9■■□□□ 1.9
OTUB1-212ENST00000543988 DLK2Q6UY11 383 aa26.9■■□□□ 1.9
OTUB1-212ENST00000543988 TBC1D22AQ8WUA7 517 aa26.9■■□□□ 1.9
OTUB1-212ENST00000543988 NEUROD6Q96NK8 337 aa26.9■■□□□ 1.9
OTUB1-212ENST00000543988 CREBZFQ9NS37 354 aa26.9■■□□□ 1.9
OTUB1-212ENST00000543988 EXOC6BQ9Y2D4 811 aa26.9■■□□□ 1.9
OTUB1-212ENST00000543988 PCDHAC2Q9Y5I4 1007 aa26.89■■□□□ 1.9
OTUB1-212ENST00000543988 TMEM88BA6NKF7 163 aa26.88■■□□□ 1.89
OTUB1-212ENST00000543988 HMMRO75330 724 aa26.88■■□□□ 1.89
OTUB1-212ENST00000543988 GPR108Q9NPR9 543 aa26.88■■□□□ 1.89
OTUB1-212ENST00000543988 TTF2Q9UNY4 1162 aaKnown RBP26.88■■□□□ 1.89
OTUB1-212ENST00000543988 DLGAP5Q15398 846 aa26.87■■□□□ 1.89
OTUB1-212ENST00000543988 CFAP100Q494V2 611 aa26.87■■□□□ 1.89
OTUB1-212ENST00000543988 TNNI3KQ59H18 835 aa26.87■■□□□ 1.89
OTUB1-212ENST00000543988 SULF1Q8IWU6 871 aa26.87■■□□□ 1.89
OTUB1-212ENST00000543988 MTMR14Q8NCE2 650 aa26.87■■□□□ 1.89
OTUB1-212ENST00000543988 FPGT-TNNI3KV9GXZ4 949 aa26.87■■□□□ 1.89
OTUB1-212ENST00000543988 PITPNM2Q9BZ72 1349 aa26.87■■□□□ 1.89
OTUB1-212ENST00000543988 SEMA3EO15041 775 aa26.86■■□□□ 1.89
OTUB1-212ENST00000543988 RASGRF1Q13972 1273 aa26.86■■□□□ 1.89
OTUB1-212ENST00000543988 WDR66Q8TBY9 1149 aa26.86■■□□□ 1.89
OTUB1-212ENST00000543988 SPDYE2BA6NHP3 402 aa26.85■■□□□ 1.89
OTUB1-212ENST00000543988 SPDYE6P0CI01 402 aa26.85■■□□□ 1.89
OTUB1-212ENST00000543988 CST9Q5W186 159 aa26.85■■□□□ 1.89
OTUB1-212ENST00000543988 DNAJC5GQ8N7S2 189 aa26.85■■□□□ 1.89
OTUB1-212ENST00000543988 DENND2AQ9ULE3 1009 aa26.85■■□□□ 1.89
OTUB1-212ENST00000543988 SCAF8Q9UPN6 1271 aaKnown RBP26.85■■□□□ 1.89
OTUB1-212ENST00000543988 AOX1Q06278 1338 aa26.85■■□□□ 1.89
OTUB1-212ENST00000543988 ZBTB22O15209 634 aa26.84■■□□□ 1.89
OTUB1-212ENST00000543988 CELF2O95319 508 aaKnown RBP26.84■■□□□ 1.89
OTUB1-212ENST00000543988 GORABQ5T7V8 394 aa26.84■■□□□ 1.89
OTUB1-212ENST00000543988 ERC1Q8IUD2 1116 aa26.84■■□□□ 1.89
OTUB1-212ENST00000543988 SERPINA10Q9UK55 444 aa26.84■■□□□ 1.89
OTUB1-212ENST00000543988 RBM5P52756 815 aaKnown RBP eCLIP26.83■■□□□ 1.89
OTUB1-212ENST00000543988 DBNDD2Q9BQY9 259 aa26.83■■□□□ 1.89
OTUB1-212ENST00000543988 ZNF408Q9H9D4 720 aa26.83■■□□□ 1.89
OTUB1-212ENST00000543988 HSP90AB4PQ58FF6 505 aa26.82■■□□□ 1.88
OTUB1-212ENST00000543988 PRMT6Q96LA8 375 aaPredicted RBP26.82■■□□□ 1.88
OTUB1-212ENST00000543988 CRBNQ96SW2 442 aa26.82■■□□□ 1.88
OTUB1-212ENST00000543988 TLR7Q9NYK1 1049 aaKnown RBP26.82■■□□□ 1.88
OTUB1-212ENST00000543988 SUGT1Q9Y2Z0 365 aa26.82■■□□□ 1.88
OTUB1-212ENST00000543988 PDS5AQ29RF7 1337 aaKnown RBP26.82■■□□□ 1.88
OTUB1-212ENST00000543988 CRKP46108 304 aa26.81■■□□□ 1.88
OTUB1-212ENST00000543988 EAF2Q96CJ1 260 aaPredicted RBP26.81■■□□□ 1.88
OTUB1-212ENST00000543988 SALL1Q9NSC2 1324 aa26.81■■□□□ 1.88
OTUB1-212ENST00000543988 CLRN2A0PK11 232 aa26.8■■□□□ 1.88
OTUB1-212ENST00000543988 APBB1O00213 710 aa26.8■■□□□ 1.88
OTUB1-212ENST00000543988 ARID4AP29374 1257 aaPredicted RBP26.8■■□□□ 1.88
OTUB1-212ENST00000543988 PRDX5P30044 214 aa26.8■■□□□ 1.88
OTUB1-212ENST00000543988 PI16Q6UXB8 463 aa26.8■■□□□ 1.88
OTUB1-212ENST00000543988 KLRG1Q96E93 195 aa26.8■■□□□ 1.88
OTUB1-212ENST00000543988 CDCA5Q96FF9 252 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms