RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 LMBR1LQ6UX01 489 aa28.73■■■□□ 2.19
CDKN3-207ENST00000543789 SLC10A4Q96EP9 437 aa28.73■■■□□ 2.19
CDKN3-207ENST00000543789 CFHR5Q9BXR6 569 aa28.73■■■□□ 2.19
CDKN3-207ENST00000543789 F8W031 263 aaPredicted RBP28.72■■■□□ 2.19
CDKN3-207ENST00000543789 MYO1BO43795 1136 aa28.72■■■□□ 2.19
CDKN3-207ENST00000543789 FKBP1AP62942 108 aaKnown RBP28.72■■■□□ 2.19
CDKN3-207ENST00000543789 CCDC57Q2TAC2 916 aa28.72■■■□□ 2.19
CDKN3-207ENST00000543789 FZD1Q9UP38 647 aa28.72■■■□□ 2.19
CDKN3-207ENST00000543789 PPP2R3BQ9Y5P8 575 aa28.72■■■□□ 2.19
CDKN3-207ENST00000543789 SPEF2Q9C093 1822 aa28.71■■■□□ 2.19
CDKN3-207ENST00000543789 PPP1R12BO60237 982 aaPredicted RBP28.71■■■□□ 2.19
CDKN3-207ENST00000543789 FKTNO75072 461 aa28.71■■■□□ 2.19
CDKN3-207ENST00000543789 MAP3K11Q16584 847 aa28.71■■■□□ 2.19
CDKN3-207ENST00000543789 CFAP100Q494V2 611 aa28.71■■■□□ 2.19
CDKN3-207ENST00000543789 TAF7LQ5H9L4 462 aa28.71■■■□□ 2.19
CDKN3-207ENST00000543789 LDHAL6AQ6ZMR3 332 aa28.71■■■□□ 2.19
CDKN3-207ENST00000543789 PCDHAC2Q9Y5I4 1007 aa28.71■■■□□ 2.19
CDKN3-207ENST00000543789 PLIN1O60240 522 aa28.7■■■□□ 2.18
CDKN3-207ENST00000543789 ALDH1A1P00352 501 aa28.7■■■□□ 2.18
CDKN3-207ENST00000543789 INHBEP58166 350 aa28.7■■■□□ 2.18
CDKN3-207ENST00000543789 SUPT20HL1Q3ZLR7 823 aa28.7■■■□□ 2.18
CDKN3-207ENST00000543789 EPHA10Q5JZY3 1008 aa28.7■■■□□ 2.18
CDKN3-207ENST00000543789 PRMT6Q96LA8 375 aaPredicted RBP28.7■■■□□ 2.18
CDKN3-207ENST00000543789 R3HDMLQ9H3Y0 253 aa28.7■■■□□ 2.18
CDKN3-207ENST00000543789 COL1A1P02452 1464 aaPredicted RBP28.7■■■□□ 2.18
CDKN3-207ENST00000543789 CLRN2A0PK11 232 aa28.69■■■□□ 2.18
CDKN3-207ENST00000543789 SPDYE2BA6NHP3 402 aa28.69■■■□□ 2.18
CDKN3-207ENST00000543789 GRM8O00222 908 aa28.69■■■□□ 2.18
CDKN3-207ENST00000543789 SPDYE6P0CI01 402 aa28.69■■■□□ 2.18
CDKN3-207ENST00000543789 ZNF594Q96JF6 807 aaPredicted RBP28.69■■■□□ 2.18
CDKN3-207ENST00000543789 CNNM1Q9NRU3 951 aa28.69■■■□□ 2.18
CDKN3-207ENST00000543789 MANSC4A6NHS7 340 aaPredicted RBP28.68■■■□□ 2.18
CDKN3-207ENST00000543789 FBXO46Q6PJ61 603 aaPredicted RBP28.68■■■□□ 2.18
CDKN3-207ENST00000543789 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.68■■■□□ 2.18
CDKN3-207ENST00000543789 JAG2Q9Y219 1238 aa28.68■■■□□ 2.18
CDKN3-207ENST00000543789 ZNF646O15015 1829 aaPredicted RBP28.68■■■□□ 2.18
CDKN3-207ENST00000543789 VEZTQ9HBM0 779 aa28.67■■■□□ 2.18
CDKN3-207ENST00000543789 C9orf78Q9NZ63 289 aaPredicted RBP28.67■■■□□ 2.18
CDKN3-207ENST00000543789 UNCXA6NJT0 531 aa28.66■■■□□ 2.18
CDKN3-207ENST00000543789 RBM5P52756 815 aaKnown RBP eCLIP28.66■■■□□ 2.18
CDKN3-207ENST00000543789 SPINK5Q9NQ38 1064 aaPredicted RBP28.66■■■□□ 2.18
CDKN3-207ENST00000543789 ZBTB48P10074 688 aaPredicted RBP28.65■■■□□ 2.18
CDKN3-207ENST00000543789 IFNL1Q8IU54 200 aa28.65■■■□□ 2.18
CDKN3-207ENST00000543789 WNK4Q96J92 1243 aa28.65■■■□□ 2.18
CDKN3-207ENST00000543789 CLMNQ96JQ2 1002 aa28.65■■■□□ 2.18
CDKN3-207ENST00000543789 ANP32CO43423 234 aa28.64■■■□□ 2.18
CDKN3-207ENST00000543789 NBPF12Q5TAG4 269 aaPredicted RBP28.64■■■□□ 2.18
CDKN3-207ENST00000543789 ALDH1L1O75891 902 aa28.63■■■□□ 2.17
CDKN3-207ENST00000543789 RASA3Q14644 834 aa28.63■■■□□ 2.17
CDKN3-207ENST00000543789 IREB2P48200 963 aaKnown RBP28.62■■■□□ 2.17
CDKN3-207ENST00000543789 UBE4AQ14139 1066 aa28.62■■■□□ 2.17
CDKN3-207ENST00000543789 SLC4A10Q6U841 1118 aa28.62■■■□□ 2.17
CDKN3-207ENST00000543789 TDRD7Q8NHU6 1098 aaKnown RBP28.62■■■□□ 2.17
CDKN3-207ENST00000543789 AOX1Q06278 1338 aa28.62■■■□□ 2.17
CDKN3-207ENST00000543789 FAM205AQ6ZU69 1335 aa28.62■■■□□ 2.17
CDKN3-207ENST00000543789 USP2O75604 605 aaPredicted RBP28.61■■■□□ 2.17
CDKN3-207ENST00000543789 HIBADHP31937 336 aaKnown RBP28.61■■■□□ 2.17
CDKN3-207ENST00000543789 SRCIN1Q9C0H9 1055 aa28.61■■■□□ 2.17
CDKN3-207ENST00000543789 TNRC18O15417 2968 aaPredicted RBP28.61■■■□□ 2.17
CDKN3-207ENST00000543789 SSC5DA1L4H1 1573 aa28.6■■■□□ 2.17
CDKN3-207ENST00000543789 MFSD14BQ5SR56 506 aa28.6■■■□□ 2.17
CDKN3-207ENST00000543789 GYG1P46976 350 aa28.59■■■□□ 2.17
CDKN3-207ENST00000543789 FAM84BQ96KN1 310 aaPredicted RBP28.59■■■□□ 2.17
CDKN3-207ENST00000543789 SERPINA10Q9UK55 444 aa28.59■■■□□ 2.17
CDKN3-207ENST00000543789 TTF2Q9UNY4 1162 aaKnown RBP28.59■■■□□ 2.17
CDKN3-207ENST00000543789 IGF2BP3O00425 579 aaKnown RBP eCLIP28.58■■■□□ 2.17
CDKN3-207ENST00000543789 TNFAIP1Q13829 316 aa28.58■■■□□ 2.17
CDKN3-207ENST00000543789 PRPF38BQ5VTL8 546 aaKnown RBP28.58■■■□□ 2.17
CDKN3-207ENST00000543789 OTUD7BQ6GQQ9 843 aa28.58■■■□□ 2.17
CDKN3-207ENST00000543789 ANKRD13AQ8IZ07 590 aa28.58■■■□□ 2.17
CDKN3-207ENST00000543789 ZNF70Q9UC06 446 aaPredicted RBP28.58■■■□□ 2.17
CDKN3-207ENST00000543789 SPDYE2Q495Y8 402 aa28.57■■■□□ 2.16
CDKN3-207ENST00000543789 SUCLG2Q96I99 432 aa28.57■■■□□ 2.16
CDKN3-207ENST00000543789 PUS3Q9BZE2 481 aaKnown RBP28.57■■■□□ 2.16
CDKN3-207ENST00000543789 TRIM17Q9Y577 477 aa28.57■■■□□ 2.16
CDKN3-207ENST00000543789 KAZALD1Q96I82 304 aa28.56■■■□□ 2.16
CDKN3-207ENST00000543789 RIPOR2Q9Y4F9 1068 aa28.56■■■□□ 2.16
CDKN3-207ENST00000543789 GJA5P36382 358 aa28.55■■■□□ 2.16
CDKN3-207ENST00000543789 DZIP1LQ8IYY4 767 aaKnown RBP28.55■■■□□ 2.16
CDKN3-207ENST00000543789 TDRD3Q9H7E2 651 aaKnown RBP28.55■■■□□ 2.16
CDKN3-207ENST00000543789 PDE4DIPQ5VU43 2346 aa28.55■■■□□ 2.16
CDKN3-207ENST00000543789 CACNA1FO60840 1977 aa28.54■■■□□ 2.16
CDKN3-207ENST00000543789 OTOP1Q7RTM1 612 aa28.54■■■□□ 2.16
CDKN3-207ENST00000543789 MROH5Q6ZUA9 1318 aa28.53■■■□□ 2.16
CDKN3-207ENST00000543789 NBPF7P0C2Y1 421 aaPredicted RBP28.53■■■□□ 2.16
CDKN3-207ENST00000543789 VPS37DQ86XT2 251 aa28.53■■■□□ 2.16
CDKN3-207ENST00000543789 TESPA1A2RU30 521 aaPredicted RBP28.52■■■□□ 2.16
CDKN3-207ENST00000543789 CRKP46108 304 aa28.52■■■□□ 2.16
CDKN3-207ENST00000543789 CRHR2Q13324 411 aa28.52■■■□□ 2.16
CDKN3-207ENST00000543789 FBXO33Q7Z6M2 555 aa28.52■■■□□ 2.16
CDKN3-207ENST00000543789 FAM9BQ8IZU0 186 aa28.52■■■□□ 2.16
CDKN3-207ENST00000543789 ERO1AQ96HE7 468 aa28.52■■■□□ 2.16
CDKN3-207ENST00000543789 UTYO14607 1347 aa28.51■■■□□ 2.15
CDKN3-207ENST00000543789 TEPSINQ96N21 525 aa28.51■■■□□ 2.15
CDKN3-207ENST00000543789 PTPN18Q99952 460 aa28.51■■■□□ 2.15
CDKN3-207ENST00000543789 ELP3Q9H9T3 547 aa28.51■■■□□ 2.15
CDKN3-207ENST00000543789 PCDH10Q9P2E7 1040 aa28.51■■■□□ 2.15
CDKN3-207ENST00000543789 TCP10L2B9ZVM9 353 aa28.5■■■□□ 2.15
CDKN3-207ENST00000543789 INTS3Q68E01 1043 aaKnown RBP28.5■■■□□ 2.15
CDKN3-207ENST00000543789 OPTNQ96CV9 577 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms