RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 H7C1W4 665 aa23.47■■□□□ 1.35
RAP1B-229ENST00000543393 ITGA6P23229 1130 aa23.47■■□□□ 1.35
RAP1B-229ENST00000543393 GJA5P36382 358 aa23.47■■□□□ 1.35
RAP1B-229ENST00000543393 KCNJ4P48050 445 aa23.47■■□□□ 1.35
RAP1B-229ENST00000543393 OTUD7BQ6GQQ9 843 aa23.47■■□□□ 1.35
RAP1B-229ENST00000543393 MPHOSPH8Q99549 860 aa23.47■■□□□ 1.35
RAP1B-229ENST00000543393 CHMP4AQ9BY43 222 aa23.47■■□□□ 1.35
RAP1B-229ENST00000543393 EFCC1Q9HA90 598 aa23.47■■□□□ 1.35
RAP1B-229ENST00000543393 CLRN2A0PK11 232 aa23.46■■□□□ 1.35
RAP1B-229ENST00000543393 FXR1P51114 621 aaKnown RBP eCLIP23.46■■□□□ 1.35
RAP1B-229ENST00000543393 SUPT20HL1Q3ZLR7 823 aa23.46■■□□□ 1.35
RAP1B-229ENST00000543393 TSPYL6Q8N831 410 aa23.46■■□□□ 1.35
RAP1B-229ENST00000543393 APAF1O14727 1248 aa23.45■■□□□ 1.34
RAP1B-229ENST00000543393 MYO1BO43795 1136 aa23.45■■□□□ 1.34
RAP1B-229ENST00000543393 CAP1Q01518 475 aa23.45■■□□□ 1.34
RAP1B-229ENST00000543393 SP3Q02447 781 aa23.45■■□□□ 1.34
RAP1B-229ENST00000543393 CHRNDQ07001 517 aa23.45■■□□□ 1.34
RAP1B-229ENST00000543393 PTPN18Q99952 460 aa23.45■■□□□ 1.34
RAP1B-229ENST00000543393 F8W031 263 aaPredicted RBP23.44■■□□□ 1.34
RAP1B-229ENST00000543393 USP2O75604 605 aaPredicted RBP23.44■■□□□ 1.34
RAP1B-229ENST00000543393 IREB2P48200 963 aaKnown RBP23.44■■□□□ 1.34
RAP1B-229ENST00000543393 CFAP100Q494V2 611 aa23.44■■□□□ 1.34
RAP1B-229ENST00000543393 NBPF12Q5TAG4 269 aaPredicted RBP23.44■■□□□ 1.34
RAP1B-229ENST00000543393 PLA2G12BQ9BX93 195 aa23.44■■□□□ 1.34
RAP1B-229ENST00000543393 TESPA1A2RU30 521 aaPredicted RBP23.43■■□□□ 1.34
RAP1B-229ENST00000543393 SPDYE2BA6NHP3 402 aa23.43■■□□□ 1.34
RAP1B-229ENST00000543393 SNAP23O00161 211 aa23.43■■□□□ 1.34
RAP1B-229ENST00000543393 SPDYE6P0CI01 402 aa23.43■■□□□ 1.34
RAP1B-229ENST00000543393 PRMT6Q96LA8 375 aaPredicted RBP23.43■■□□□ 1.34
RAP1B-229ENST00000543393 VEZTQ9HBM0 779 aa23.43■■□□□ 1.34
RAP1B-229ENST00000543393 AOX1Q06278 1338 aa23.42■■□□□ 1.34
RAP1B-229ENST00000543393 IRS2Q9Y4H2 1338 aa23.42■■□□□ 1.34
RAP1B-229ENST00000543393 ANKRD13AQ8IZ07 590 aa23.42■■□□□ 1.34
RAP1B-229ENST00000543393 TMEM106CQ9BVX2 250 aa23.42■■□□□ 1.34
RAP1B-229ENST00000543393 CSF1RP07333 972 aa23.41■■□□□ 1.34
RAP1B-229ENST00000543393 STK31Q9BXU1 1019 aa23.41■■□□□ 1.34
RAP1B-229ENST00000543393 OTOFQ9HC10 1997 aa23.41■■□□□ 1.34
RAP1B-229ENST00000543393 TAF5LO75529 589 aa23.4■■□□□ 1.34
RAP1B-229ENST00000543393 GCKRQ14397 625 aa23.4■■□□□ 1.34
RAP1B-229ENST00000543393 RASA3Q14644 834 aa23.4■■□□□ 1.34
RAP1B-229ENST00000543393 C15orf52Q6ZUT6 534 aaKnown RBP23.4■■□□□ 1.34
RAP1B-229ENST00000543393 ZNF333Q96JL9 665 aa23.4■■□□□ 1.34
RAP1B-229ENST00000543393 IL1R1P14778 569 aa23.39■■□□□ 1.33
RAP1B-229ENST00000543393 CASP7P55210 303 aa23.39■■□□□ 1.33
RAP1B-229ENST00000543393 FKBP1AP62942 108 aaKnown RBP23.39■■□□□ 1.33
RAP1B-229ENST00000543393 DDX10Q13206 875 aaKnown RBP23.39■■□□□ 1.33
RAP1B-229ENST00000543393 G2E3Q7L622 706 aa23.39■■□□□ 1.33
RAP1B-229ENST00000543393 HELBQ8NG08 1087 aaPredicted RBP23.39■■□□□ 1.33
RAP1B-229ENST00000543393 OPTNQ96CV9 577 aa23.39■■□□□ 1.33
RAP1B-229ENST00000543393 ELP3Q9H9T3 547 aa23.39■■□□□ 1.33
RAP1B-229ENST00000543393 COLQQ9Y215 455 aaPredicted RBP23.39■■□□□ 1.33
RAP1B-229ENST00000543393 A0A1B0GUL6 1792 aa23.39■■□□□ 1.33
RAP1B-229ENST00000543393 RBM5P52756 815 aaKnown RBP eCLIP23.38■■□□□ 1.33
RAP1B-229ENST00000543393 MS4A4AQ96JQ5 239 aa23.38■■□□□ 1.33
RAP1B-229ENST00000543393 JAG2Q9Y219 1238 aa23.38■■□□□ 1.33
RAP1B-229ENST00000543393 ANKRD18BA2A2Z9 1011 aa23.37■■□□□ 1.33
RAP1B-229ENST00000543393 SLC9C1Q4G0N8 1177 aa23.37■■□□□ 1.33
RAP1B-229ENST00000543393 ZNF804AQ7Z570 1209 aa23.37■■□□□ 1.33
RAP1B-229ENST00000543393 PTCH2Q9Y6C5 1203 aa23.37■■□□□ 1.33
RAP1B-229ENST00000543393 NBPF11Q86T75 865 aa23.36■■□□□ 1.33
RAP1B-229ENST00000543393 TSR2Q969E8 191 aaKnown RBP23.36■■□□□ 1.33
RAP1B-229ENST00000543393 SLC4A2P04920 1241 aa23.35■■□□□ 1.33
RAP1B-229ENST00000543393 SLC4A8Q2Y0W8 1093 aa23.35■■□□□ 1.33
RAP1B-229ENST00000543393 BRI3BPQ8WY22 251 aa23.35■■□□□ 1.33
RAP1B-229ENST00000543393 MYH16Q9H6N6 1097 aa23.35■■□□□ 1.33
RAP1B-229ENST00000543393 ARHGEF6Q15052 776 aa23.34■■□□□ 1.33
RAP1B-229ENST00000543393 TAF1CQ15572 869 aaPredicted RBP23.34■■□□□ 1.33
RAP1B-229ENST00000543393 CNKSR2Q8WXI2 1034 aa23.34■■□□□ 1.33
RAP1B-229ENST00000543393 ZFYVE28Q9HCC9 887 aa23.34■■□□□ 1.33
RAP1B-229ENST00000543393 TNFAIP1Q13829 316 aa23.33■■□□□ 1.33
RAP1B-229ENST00000543393 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.33■■□□□ 1.33
RAP1B-229ENST00000543393 ZNF70Q9UC06 446 aaPredicted RBP23.33■■□□□ 1.33
RAP1B-229ENST00000543393 CCL15-CCL14A0A0B4J2E2 113 aa23.32■■□□□ 1.32
RAP1B-229ENST00000543393 MYCP01106 439 aaPredicted RBP23.32■■□□□ 1.32
RAP1B-229ENST00000543393 IFIT5Q13325 482 aaKnown RBP23.32■■□□□ 1.32
RAP1B-229ENST00000543393 CCL15Q16663 113 aa23.32■■□□□ 1.32
RAP1B-229ENST00000543393 TWISTNBQ3B726 338 aaPredicted RBP23.32■■□□□ 1.32
RAP1B-229ENST00000543393 SPDYE2Q495Y8 402 aa23.32■■□□□ 1.32
RAP1B-229ENST00000543393 CDAN1Q8IWY9 1227 aa23.32■■□□□ 1.32
RAP1B-229ENST00000543393 GTF2A2P52657 109 aa23.31■■□□□ 1.32
RAP1B-229ENST00000543393 FLIIQ13045 1269 aa23.31■■□□□ 1.32
RAP1B-229ENST00000543393 FAM43AQ8N2R8 423 aa23.31■■□□□ 1.32
RAP1B-229ENST00000543393 LINS1Q8NG48 757 aa23.31■■□□□ 1.32
RAP1B-229ENST00000543393 DNAAF4Q8WXU2 420 aa23.31■■□□□ 1.32
RAP1B-229ENST00000543393 TEPSINQ96N21 525 aa23.31■■□□□ 1.32
RAP1B-229ENST00000543393 TDRD3Q9H7E2 651 aaKnown RBP23.31■■□□□ 1.32
RAP1B-229ENST00000543393 CEP290O15078 2479 aa23.3■■□□□ 1.32
RAP1B-229ENST00000543393 VGLL4Q14135 290 aa23.3■■□□□ 1.32
RAP1B-229ENST00000543393 CHMP3Q9Y3E7 222 aa23.3■■□□□ 1.32
RAP1B-229ENST00000543393 TRIOBPQ9H2D6 2365 aa23.29■■□□□ 1.32
RAP1B-229ENST00000543393 H0YGN5 161 aa23.29■■□□□ 1.32
RAP1B-229ENST00000543393 FOXO4P98177 505 aa23.29■■□□□ 1.32
RAP1B-229ENST00000543393 FKBP5Q13451 457 aaPredicted RBP23.29■■□□□ 1.32
RAP1B-229ENST00000543393 OTUD5Q96G74 571 aa23.29■■□□□ 1.32
RAP1B-229ENST00000543393 SERPINA10Q9UK55 444 aa23.29■■□□□ 1.32
RAP1B-229ENST00000543393 TTF2Q9UNY4 1162 aaKnown RBP23.29■■□□□ 1.32
RAP1B-229ENST00000543393 ZSWIM8A7E2V4 1837 aa23.29■■□□□ 1.32
RAP1B-229ENST00000543393 PLIN1O60240 522 aa23.28■■□□□ 1.32
RAP1B-229ENST00000543393 MAP3K9P80192 1104 aa23.28■■□□□ 1.32
RAP1B-229ENST00000543393 MFSD14BQ5SR56 506 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms