RNA–Protein interactions for RNA: ENST00000543049.1

NLRC5-222, Transcript of NLR family CARD domain containing 5, human

TSL 2

Gene NLRC5, Length 484 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NLRC5-222	ENST00000543049	CTGF	P29279	349 aa		13.6	□□□□□ -0.23
NLRC5-222	ENST00000543049	MMP14	P50281	582 aa		13.6	□□□□□ -0.23
NLRC5-222	ENST00000543049	GTF2A2	P52657	109 aa		13.6	□□□□□ -0.23
NLRC5-222	ENST00000543049	UBXN2A	P68543	259 aa		13.6	□□□□□ -0.23
NLRC5-222	ENST00000543049	STRIP1	Q5VSL9	837 aa		13.6	□□□□□ -0.23
NLRC5-222	ENST00000543049	FAM122A	Q96E09	287 aa		13.6	□□□□□ -0.23
NLRC5-222	ENST00000543049	UNC93B1	Q9H1C4	597 aa		13.6	□□□□□ -0.23
NLRC5-222	ENST00000543049	XDH	P47989	1333 aa		13.6	□□□□□ -0.23
NLRC5-222	ENST00000543049	IRS2	Q9Y4H2	1338 aa		13.6	□□□□□ -0.23
NLRC5-222	ENST00000543049	IRS4	O14654	1257 aa	Predicted RBP	13.59	□□□□□ -0.23
NLRC5-222	ENST00000543049	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.59	□□□□□ -0.23
NLRC5-222	ENST00000543049	HOXD10	P28358	340 aa		13.59	□□□□□ -0.23
NLRC5-222	ENST00000543049	PSMC4	P43686	418 aa		13.59	□□□□□ -0.23
NLRC5-222	ENST00000543049	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
NLRC5-222	ENST00000543049	DLGAP5	Q15398	846 aa		13.59	□□□□□ -0.23
NLRC5-222	ENST00000543049	C7orf61	Q8IZ16	206 aa		13.59	□□□□□ -0.23
NLRC5-222	ENST00000543049	FAM161B	Q96MY7	647 aa		13.59	□□□□□ -0.23
NLRC5-222	ENST00000543049	PPP2R3B	Q9Y5P8	575 aa		13.59	□□□□□ -0.23
NLRC5-222	ENST00000543049	ATP5J2-PTCD1	G3V325	749 aa		13.58	□□□□□ -0.24
NLRC5-222	ENST00000543049	FMNL1	O95466	1100 aa	Predicted RBP	13.58	□□□□□ -0.24
NLRC5-222	ENST00000543049	OSBP	P22059	807 aa		13.58	□□□□□ -0.24
NLRC5-222	ENST00000543049	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
NLRC5-222	ENST00000543049	PAWR	Q96IZ0	340 aa	Known RBP	13.58	□□□□□ -0.24
NLRC5-222	ENST00000543049	CLRN2	A0PK11	232 aa		13.57	□□□□□ -0.24
NLRC5-222	ENST00000543049	SYN1	P17600	705 aa		13.57	□□□□□ -0.24
NLRC5-222	ENST00000543049	MAGEA10	P43363	369 aa	Predicted RBP	13.57	□□□□□ -0.24
NLRC5-222	ENST00000543049	TTLL5	Q6EMB2	1281 aa		13.57	□□□□□ -0.24
NLRC5-222	ENST00000543049	UBE2O	Q9C0C9	1292 aa	Known RBP	13.57	□□□□□ -0.24
NLRC5-222	ENST00000543049	NUDC	Q9Y266	331 aa		13.57	□□□□□ -0.24
NLRC5-222	ENST00000543049	PCDHAC2	Q9Y5I4	1007 aa		13.57	□□□□□ -0.24
NLRC5-222	ENST00000543049	MYPN	Q86TC9	1320 aa		13.57	□□□□□ -0.24
NLRC5-222	ENST00000543049	POTEB2	H3BUK9	544 aa		13.56	□□□□□ -0.24
NLRC5-222	ENST00000543049	SYMPK	Q92797	1274 aa	Known RBP	13.56	□□□□□ -0.24
NLRC5-222	ENST00000543049	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.56	□□□□□ -0.24
NLRC5-222	ENST00000543049	ISCA1	Q9BUE6	129 aa		13.56	□□□□□ -0.24
NLRC5-222	ENST00000543049	VEZT	Q9HBM0	779 aa		13.56	□□□□□ -0.24
NLRC5-222	ENST00000543049	CPA4	Q9UI42	421 aa		13.56	□□□□□ -0.24
NLRC5-222	ENST00000543049	ZNF804B	A4D1E1	1349 aa		13.56	□□□□□ -0.24
NLRC5-222	ENST00000543049	PER1	O15534	1290 aa	Predicted RBP	13.55	□□□□□ -0.24
NLRC5-222	ENST00000543049	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.55	□□□□□ -0.24
NLRC5-222	ENST00000543049	C17orf99	Q6UX52	265 aa		13.55	□□□□□ -0.24
NLRC5-222	ENST00000543049	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.55	□□□□□ -0.24
NLRC5-222	ENST00000543049	HELB	Q8NG08	1087 aa	Predicted RBP	13.55	□□□□□ -0.24
NLRC5-222	ENST00000543049	CFAP53	Q96M91	514 aa		13.55	□□□□□ -0.24
NLRC5-222	ENST00000543049	DEFB118	Q96PH6	123 aa		13.55	□□□□□ -0.24
NLRC5-222	ENST00000543049	BTBD19	C9JJ37	291 aa		13.54	□□□□□ -0.24
NLRC5-222	ENST00000543049	GTF2I	P78347	998 aa		13.54	□□□□□ -0.24
NLRC5-222	ENST00000543049	RASA3	Q14644	834 aa		13.54	□□□□□ -0.24
NLRC5-222	ENST00000543049	NECAB2	Q7Z6G3	386 aa		13.54	□□□□□ -0.24
NLRC5-222	ENST00000543049	COA1	Q9GZY4	146 aa		13.54	□□□□□ -0.24
NLRC5-222	ENST00000543049	MED23	Q9ULK4	1368 aa		13.54	□□□□□ -0.24
NLRC5-222	ENST00000543049	ALPK3	Q96L96	1907 aa		13.53	□□□□□ -0.24
NLRC5-222	ENST00000543049	MYO1B	O43795	1136 aa		13.53	□□□□□ -0.24
NLRC5-222	ENST00000543049	CETP	P11597	493 aa		13.53	□□□□□ -0.24
NLRC5-222	ENST00000543049	HOXD11	P31277	338 aa	Predicted RBP	13.53	□□□□□ -0.24
NLRC5-222	ENST00000543049	PRKCZ	Q05513	592 aa		13.53	□□□□□ -0.24
NLRC5-222	ENST00000543049	VGLL4	Q14135	290 aa		13.53	□□□□□ -0.24
NLRC5-222	ENST00000543049	TXNRD3	Q86VQ6	643 aa		13.53	□□□□□ -0.24
NLRC5-222	ENST00000543049	ANKRD18A	Q8IVF6	992 aa		13.53	□□□□□ -0.24
NLRC5-222	ENST00000543049	MTMR14	Q8NCE2	650 aa		13.53	□□□□□ -0.24
NLRC5-222	ENST00000543049	MAFA	Q8NHW3	353 aa	Predicted RBP	13.53	□□□□□ -0.24
NLRC5-222	ENST00000543049	DIS3L	Q8TF46	1054 aa	Known RBP	13.53	□□□□□ -0.24
NLRC5-222	ENST00000543049	PRMT6	Q96LA8	375 aa	Predicted RBP	13.53	□□□□□ -0.24
NLRC5-222	ENST00000543049	TNFRSF10A	O00220	468 aa		13.52	□□□□□ -0.25
NLRC5-222	ENST00000543049	MAP3K9	P80192	1104 aa		13.52	□□□□□ -0.25
NLRC5-222	ENST00000543049	CCDC152	Q4G0S7	254 aa		13.52	□□□□□ -0.25
NLRC5-222	ENST00000543049	SLAIN1	Q8ND83	568 aa		13.52	□□□□□ -0.25
NLRC5-222	ENST00000543049	PLBD2	Q8NHP8	589 aa		13.52	□□□□□ -0.25
NLRC5-222	ENST00000543049	ZCCHC17	Q9NP64	241 aa	Known RBP	13.52	□□□□□ -0.25
NLRC5-222	ENST00000543049	TSPYL4	Q9UJ04	414 aa		13.52	□□□□□ -0.25
NLRC5-222	ENST00000543049	AOX1	Q06278	1338 aa		13.52	□□□□□ -0.25
NLRC5-222	ENST00000543049	TMEM265	A0A087WTH1	108 aa		13.51	□□□□□ -0.25
NLRC5-222	ENST00000543049		F8W031	263 aa	Predicted RBP	13.51	□□□□□ -0.25
NLRC5-222	ENST00000543049	CAPN2	P17655	700 aa		13.51	□□□□□ -0.25
NLRC5-222	ENST00000543049	CFAP100	Q494V2	611 aa		13.51	□□□□□ -0.25
NLRC5-222	ENST00000543049	CDX2	Q99626	313 aa	Predicted RBP	13.51	□□□□□ -0.25
NLRC5-222	ENST00000543049	GABRQ	Q9UN88	632 aa		13.51	□□□□□ -0.25
NLRC5-222	ENST00000543049	CSAD	Q9Y600	493 aa		13.51	□□□□□ -0.25
NLRC5-222	ENST00000543049	OTOF	Q9HC10	1997 aa		13.51	□□□□□ -0.25
NLRC5-222	ENST00000543049	EYS	Q5T1H1	3165 aa		13.5	□□□□□ -0.25
NLRC5-222	ENST00000543049	SPDYE2B	A6NHP3	402 aa		13.5	□□□□□ -0.25
NLRC5-222	ENST00000543049	ADCY3	O60266	1144 aa		13.5	□□□□□ -0.25
NLRC5-222	ENST00000543049	SPDYE6	P0CI01	402 aa		13.5	□□□□□ -0.25
NLRC5-222	ENST00000543049	CCT4	P50991	539 aa	Known RBP	13.5	□□□□□ -0.25
NLRC5-222	ENST00000543049	CRISPLD2	Q9H0B8	497 aa		13.5	□□□□□ -0.25
NLRC5-222	ENST00000543049	MINPP1	Q9UNW1	487 aa		13.5	□□□□□ -0.25
NLRC5-222	ENST00000543049	INHA	P05111	366 aa		13.49	□□□□□ -0.25
NLRC5-222	ENST00000543049	ELN	P15502	786 aa		13.49	□□□□□ -0.25
NLRC5-222	ENST00000543049	SNAPC2	Q13487	334 aa		13.49	□□□□□ -0.25
NLRC5-222	ENST00000543049	ZNF697	Q5TEC3	545 aa		13.49	□□□□□ -0.25
NLRC5-222	ENST00000543049	CDAN1	Q8IWY9	1227 aa		13.49	□□□□□ -0.25
NLRC5-222	ENST00000543049	CERS5	Q8N5B7	392 aa		13.49	□□□□□ -0.25
NLRC5-222	ENST00000543049	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.49	□□□□□ -0.25
NLRC5-222	ENST00000543049	JARID2	Q92833	1246 aa	Predicted RBP	13.49	□□□□□ -0.25
NLRC5-222	ENST00000543049	TTC28	Q96AY4	2481 aa		13.49	□□□□□ -0.25
NLRC5-222	ENST00000543049	SPDYE5	A6NIY4	337 aa		13.48	□□□□□ -0.25
NLRC5-222	ENST00000543049	HSP90B1	P14625	803 aa	Known RBP	13.48	□□□□□ -0.25
NLRC5-222	ENST00000543049	RBM5	P52756	815 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
NLRC5-222	ENST00000543049	FCGRT	P55899	365 aa		13.48	□□□□□ -0.25
NLRC5-222	ENST00000543049	TRIM28	Q13263	835 aa	Known RBP	13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms