RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 RNF181Q9P0P0 153 aa13.09□□□□□ -0.31
NPIPB3-210ENST00000542817 JAG2Q9Y219 1238 aa13.09□□□□□ -0.31
NPIPB3-210ENST00000542817 PDS5AQ29RF7 1337 aaKnown RBP13.07□□□□□ -0.32
NPIPB3-210ENST00000542817 SEMA3EO15041 775 aa13.07□□□□□ -0.32
NPIPB3-210ENST00000542817 RAD17O75943 681 aa13.07□□□□□ -0.32
NPIPB3-210ENST00000542817 CYP2E1P05181 493 aaPredicted RBP13.07□□□□□ -0.32
NPIPB3-210ENST00000542817 VIL1P09327 827 aaKnown RBP13.07□□□□□ -0.32
NPIPB3-210ENST00000542817 NIM1KQ8IY84 436 aa13.07□□□□□ -0.32
NPIPB3-210ENST00000542817 SPATA5Q8NB90 893 aa13.07□□□□□ -0.32
NPIPB3-210ENST00000542817 ZNF384Q8TF68 577 aa13.07□□□□□ -0.32
NPIPB3-210ENST00000542817 EDC3Q96F86 508 aaKnown RBP13.07□□□□□ -0.32
NPIPB3-210ENST00000542817 GMLQ99445 158 aa13.07□□□□□ -0.32
NPIPB3-210ENST00000542817 HAUS7Q99871 368 aa13.07□□□□□ -0.32
NPIPB3-210ENST00000542817 ANTXR1Q9H6X2 564 aa13.07□□□□□ -0.32
NPIPB3-210ENST00000542817 SNRKQ9NRH2 765 aa13.07□□□□□ -0.32
NPIPB3-210ENST00000542817 TTC41PQ6P2S7 1318 aa13.07□□□□□ -0.32
NPIPB3-210ENST00000542817 PSME4Q14997 1843 aa13.06□□□□□ -0.32
NPIPB3-210ENST00000542817 TIAM2Q8IVF5 1701 aa13.06□□□□□ -0.32
NPIPB3-210ENST00000542817 PSMD14O00487 310 aa13.06□□□□□ -0.32
NPIPB3-210ENST00000542817 UQCRFS1P1P0C7P4 283 aa13.06□□□□□ -0.32
NPIPB3-210ENST00000542817 GSPT1P15170 499 aaKnown RBP13.06□□□□□ -0.32
NPIPB3-210ENST00000542817 ZAP70P43403 619 aa13.06□□□□□ -0.32
NPIPB3-210ENST00000542817 GTF2IP78347 998 aa13.06□□□□□ -0.32
NPIPB3-210ENST00000542817 CCDC158Q5M9N0 1113 aa13.06□□□□□ -0.32
NPIPB3-210ENST00000542817 TTC39AQ5SRH9 613 aa13.06□□□□□ -0.32
NPIPB3-210ENST00000542817 GORABQ5T7V8 394 aa13.06□□□□□ -0.32
NPIPB3-210ENST00000542817 STRIP1Q5VSL9 837 aa13.06□□□□□ -0.32
NPIPB3-210ENST00000542817 TTLL5Q6EMB2 1281 aa13.06□□□□□ -0.32
NPIPB3-210ENST00000542817 TBC1D9Q6ZT07 1266 aa13.06□□□□□ -0.32
NPIPB3-210ENST00000542817 VPS37DQ86XT2 251 aa13.06□□□□□ -0.32
NPIPB3-210ENST00000542817 BOLA2Q9H3K6 86 aa13.06□□□□□ -0.32
NPIPB3-210ENST00000542817 PIH1D3Q9NQM4 214 aaKnown RBP13.06□□□□□ -0.32
NPIPB3-210ENST00000542817 SALL1Q9NSC2 1324 aa13.06□□□□□ -0.32
NPIPB3-210ENST00000542817 USP17L3A6NCW0 530 aa13.05□□□□□ -0.32
NPIPB3-210ENST00000542817 USP17L4A6NCW7 530 aa13.05□□□□□ -0.32
NPIPB3-210ENST00000542817 USP17L1Q7RTZ2 530 aa13.05□□□□□ -0.32
NPIPB3-210ENST00000542817 JDP2Q8WYK2 163 aa13.05□□□□□ -0.32
NPIPB3-210ENST00000542817 ANP32EQ9BTT0 268 aa13.05□□□□□ -0.32
NPIPB3-210ENST00000542817 DENND2AQ9ULE3 1009 aa13.05□□□□□ -0.32
NPIPB3-210ENST00000542817 AOX1Q06278 1338 aa13.05□□□□□ -0.32
NPIPB3-210ENST00000542817 SHTN1A0MZ66 631 aa13.04□□□□□ -0.32
NPIPB3-210ENST00000542817 CHGBP05060 677 aa13.04□□□□□ -0.32
NPIPB3-210ENST00000542817 FKBP1AP62942 108 aaKnown RBP13.04□□□□□ -0.32
NPIPB3-210ENST00000542817 CHAF1AQ13111 956 aaPredicted RBP13.04□□□□□ -0.32
NPIPB3-210ENST00000542817 RSBN1LQ6PCB5 846 aaPredicted RBP13.04□□□□□ -0.32
NPIPB3-210ENST00000542817 GNL3LQ9NVN8 582 aaKnown RBP13.04□□□□□ -0.32
NPIPB3-210ENST00000542817 ZBTB12Q9Y330 459 aaPredicted RBP13.04□□□□□ -0.32
NPIPB3-210ENST00000542817 GLRX3O76003 335 aaKnown RBP13.03□□□□□ -0.32
NPIPB3-210ENST00000542817 PRDX5P30044 214 aa13.03□□□□□ -0.32
NPIPB3-210ENST00000542817 CIAPIN1Q6FI81 312 aa13.03□□□□□ -0.32
NPIPB3-210ENST00000542817 ZC3H4Q9UPT8 1303 aaKnown RBP13.03□□□□□ -0.32
NPIPB3-210ENST00000542817 MYO5AQ9Y4I1 1855 aaKnown RBP13.02□□□□□ -0.32
NPIPB3-210ENST00000542817 POTECB2RU33 542 aa13.02□□□□□ -0.33
NPIPB3-210ENST00000542817 DDNO94850 711 aaPredicted RBP13.02□□□□□ -0.33
NPIPB3-210ENST00000542817 MAP4K4O95819 1239 aaPredicted RBP13.02□□□□□ -0.33
NPIPB3-210ENST00000542817 SCNN1DP51172 638 aa13.02□□□□□ -0.33
NPIPB3-210ENST00000542817 MFSD14BQ5SR56 506 aa13.02□□□□□ -0.33
NPIPB3-210ENST00000542817 TTC22Q5TAA0 569 aa13.02□□□□□ -0.33
NPIPB3-210ENST00000542817 WDR66Q8TBY9 1149 aa13.02□□□□□ -0.33
NPIPB3-210ENST00000542817 PAG1Q9NWQ8 432 aa13.02□□□□□ -0.33
NPIPB3-210ENST00000542817 G3V3G9 751 aa13.01□□□□□ -0.33
NPIPB3-210ENST00000542817 GOLIM4O00461 696 aa13.01□□□□□ -0.33
NPIPB3-210ENST00000542817 EIF6P56537 245 aaKnown RBP13.01□□□□□ -0.33
NPIPB3-210ENST00000542817 SLFNL1Q499Z3 407 aa13.01□□□□□ -0.33
NPIPB3-210ENST00000542817 DCAF8Q5TAQ9 597 aa13.01□□□□□ -0.33
NPIPB3-210ENST00000542817 GPC2Q8N158 579 aa13.01□□□□□ -0.33
NPIPB3-210ENST00000542817 DNAJC2Q99543 621 aaKnown RBP13.01□□□□□ -0.33
NPIPB3-210ENST00000542817 PCDHAC2Q9Y5I4 1007 aa13.01□□□□□ -0.33
NPIPB3-210ENST00000542817 MYH13Q9UKX3 1938 aa13□□□□□ -0.33
NPIPB3-210ENST00000542817 GLTPD2A6NH11 291 aa13□□□□□ -0.33
NPIPB3-210ENST00000542817 ERC2O15083 957 aa13□□□□□ -0.33
NPIPB3-210ENST00000542817 FRAT2O75474 233 aaPredicted RBP13□□□□□ -0.33
NPIPB3-210ENST00000542817 EGFRP00533 1210 aa13□□□□□ -0.33
NPIPB3-210ENST00000542817 RGS3P49796 1198 aa13□□□□□ -0.33
NPIPB3-210ENST00000542817 GMPSP49915 693 aaPredicted RBP13□□□□□ -0.33
NPIPB3-210ENST00000542817 TNIP1Q15025 636 aa13□□□□□ -0.33
NPIPB3-210ENST00000542817 NSUN4Q96CB9 384 aaKnown RBP13□□□□□ -0.33
NPIPB3-210ENST00000542817 GPATCH3Q96I76 525 aa13□□□□□ -0.33
NPIPB3-210ENST00000542817 L3MBTL3Q96JM7 780 aaPredicted RBP13□□□□□ -0.33
NPIPB3-210ENST00000542817 ZBTB47Q9UFB7 747 aaPredicted RBP13□□□□□ -0.33
NPIPB3-210ENST00000542817 DOCK2Q92608 1830 aa12.99□□□□□ -0.33
NPIPB3-210ENST00000542817 TCRBV5S4A2TA0A5A2 114 aa12.99□□□□□ -0.33
NPIPB3-210ENST00000542817 SDSP20132 328 aa12.99□□□□□ -0.33
NPIPB3-210ENST00000542817 ZNF280AP59817 542 aaPredicted RBP12.99□□□□□ -0.33
NPIPB3-210ENST00000542817 ADGRA1Q86SQ6 560 aa12.99□□□□□ -0.33
NPIPB3-210ENST00000542817 KIAA0825Q8IV33 1275 aa12.99□□□□□ -0.33
NPIPB3-210ENST00000542817 KBTBD3Q8NAB2 608 aa12.99□□□□□ -0.33
NPIPB3-210ENST00000542817 AGBL3Q8NEM8 1001 aa12.99□□□□□ -0.33
NPIPB3-210ENST00000542817 TBC1D22AQ8WUA7 517 aa12.99□□□□□ -0.33
NPIPB3-210ENST00000542817 DPF2Q92785 391 aa12.99□□□□□ -0.33
NPIPB3-210ENST00000542817 FBXW7Q969H0 707 aa12.99□□□□□ -0.33
NPIPB3-210ENST00000542817 ZBED3Q96IU2 234 aaPredicted RBP12.99□□□□□ -0.33
NPIPB3-210ENST00000542817 SUGT1Q9Y2Z0 365 aa12.99□□□□□ -0.33
NPIPB3-210ENST00000542817 GJA3Q9Y6H8 435 aa12.99□□□□□ -0.33
NPIPB3-210ENST00000542817 MECOMQ03112 1051 aa12.98□□□□□ -0.33
NPIPB3-210ENST00000542817 DIXDC1Q155Q3 683 aa12.98□□□□□ -0.33
NPIPB3-210ENST00000542817 TSHZ2Q9NRE2 1034 aa12.98□□□□□ -0.33
NPIPB3-210ENST00000542817 ABCF2Q9UG63 623 aa12.98□□□□□ -0.33
NPIPB3-210ENST00000542817 ADAMTSL1Q8N6G6 1762 aa12.97□□□□□ -0.33
NPIPB3-210ENST00000542817 GAKO14976 1311 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms