RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 LRRC24Q50LG9 513 aa15.07■□□□□ 0
CACNA1C-IT3-201ENST00000542680 MASTLQ96GX5 879 aa15.07■□□□□ 0
CACNA1C-IT3-201ENST00000542680 GPATCH3Q96I76 525 aa15.07■□□□□ 0
CACNA1C-IT3-201ENST00000542680 STAP2Q9UGK3 403 aa15.07■□□□□ 0
CACNA1C-IT3-201ENST00000542680 TTC41PQ6P2S7 1318 aa15.07■□□□□ 0
CACNA1C-IT3-201ENST00000542680 FAM155AB1AL88 458 aaPredicted RBP15.06■□□□□ 0
CACNA1C-IT3-201ENST00000542680 TRPA1O75762 1119 aa15.06■□□□□ 0
CACNA1C-IT3-201ENST00000542680 BBOX1O75936 387 aa15.06■□□□□ 0
CACNA1C-IT3-201ENST00000542680 IFIT2P09913 472 aaKnown RBP15.06■□□□□ 0
CACNA1C-IT3-201ENST00000542680 MX1P20591 662 aa15.06■□□□□ 0
CACNA1C-IT3-201ENST00000542680 IARSP41252 1262 aaKnown RBP15.06■□□□□ 0
CACNA1C-IT3-201ENST00000542680 RGS3P49796 1198 aa15.06■□□□□ 0
CACNA1C-IT3-201ENST00000542680 TFCP2Q12800 502 aa15.06■□□□□ 0
CACNA1C-IT3-201ENST00000542680 TNNI3KQ59H18 835 aa15.06■□□□□ 0
CACNA1C-IT3-201ENST00000542680 METTL24Q5JXM2 366 aa15.06■□□□□ 0
CACNA1C-IT3-201ENST00000542680 PLEKHM2Q8IWE5 1019 aa15.06■□□□□ 0
CACNA1C-IT3-201ENST00000542680 VGLL2Q8N8G2 317 aa15.06■□□□□ 0
CACNA1C-IT3-201ENST00000542680 PUS3Q9BZE2 481 aaKnown RBP15.06■□□□□ 0
CACNA1C-IT3-201ENST00000542680 IL1RAPL2Q9NP60 686 aa15.06■□□□□ 0
CACNA1C-IT3-201ENST00000542680 COLQQ9Y215 455 aaPredicted RBP15.06■□□□□ 0
CACNA1C-IT3-201ENST00000542680 FPGT-TNNI3KV9GXZ4 949 aa15.06■□□□□ 0
CACNA1C-IT3-201ENST00000542680 TAF1P21675 1872 aa15.06■□□□□ 0
CACNA1C-IT3-201ENST00000542680 PDE8BO95263 885 aa15.05■□□□□ -0
CACNA1C-IT3-201ENST00000542680 ALDH1B1P30837 517 aa15.05■□□□□ -0
CACNA1C-IT3-201ENST00000542680 AACSQ86V21 672 aa15.05■□□□□ -0
CACNA1C-IT3-201ENST00000542680 CELF1Q92879 486 aaKnown RBP15.05■□□□□ -0
CACNA1C-IT3-201ENST00000542680 GLIS2Q9BZE0 524 aaPredicted RBP15.05■□□□□ -0
CACNA1C-IT3-201ENST00000542680 ANKRD2Q9GZV1 360 aa15.05■□□□□ -0
CACNA1C-IT3-201ENST00000542680 GJA3Q9Y6H8 435 aa15.05■□□□□ -0
CACNA1C-IT3-201ENST00000542680 KIAA0100Q14667 2235 aaKnown RBP15.05■□□□□ -0
CACNA1C-IT3-201ENST00000542680 COL4A1P02462 1669 aa15.04■□□□□ -0
CACNA1C-IT3-201ENST00000542680 SNED1Q8TER0 1413 aa15.04■□□□□ -0
CACNA1C-IT3-201ENST00000542680 ERC2O15083 957 aa15.04■□□□□ -0
CACNA1C-IT3-201ENST00000542680 PDE1AP54750 535 aa15.04■□□□□ -0
CACNA1C-IT3-201ENST00000542680 PUM3Q15397 648 aaKnown RBP15.04■□□□□ -0
CACNA1C-IT3-201ENST00000542680 BMP2KLQ5H9B9 411 aa15.04■□□□□ -0
CACNA1C-IT3-201ENST00000542680 OLFM4Q6UX06 510 aa15.04■□□□□ -0
CACNA1C-IT3-201ENST00000542680 EAF2Q96CJ1 260 aaPredicted RBP15.04■□□□□ -0
CACNA1C-IT3-201ENST00000542680 PAPPA2Q9BXP8 1791 aa15.03■□□□□ -0
CACNA1C-IT3-201ENST00000542680 KIF23Q02241 960 aaPredicted RBP15.03■□□□□ -0
CACNA1C-IT3-201ENST00000542680 LPIN2Q92539 896 aa15.03■□□□□ -0
CACNA1C-IT3-201ENST00000542680 ECHDC1Q9NTX5 307 aa15.03■□□□□ -0
CACNA1C-IT3-201ENST00000542680 A0A1B0GUL7 405 aa15.02■□□□□ -0
CACNA1C-IT3-201ENST00000542680 GLRX3O76003 335 aaKnown RBP15.02■□□□□ -0
CACNA1C-IT3-201ENST00000542680 FGFR2P21802 821 aa15.02■□□□□ -0
CACNA1C-IT3-201ENST00000542680 HUNKP57058 714 aa15.02■□□□□ -0
CACNA1C-IT3-201ENST00000542680 CHRNDQ07001 517 aa15.02■□□□□ -0
CACNA1C-IT3-201ENST00000542680 ATP2B3Q16720 1220 aa15.02■□□□□ -0
CACNA1C-IT3-201ENST00000542680 RTKN2Q8IZC4 609 aa15.02■□□□□ -0
CACNA1C-IT3-201ENST00000542680 MINPP1Q9UNW1 487 aa15.02■□□□□ -0
CACNA1C-IT3-201ENST00000542680 ZBTB22O15209 634 aa15.01□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 SLC5A1P13866 664 aa15.01□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 MNX1P50219 401 aaPredicted RBP15.01□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 EIF6P56537 245 aaKnown RBP15.01□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 UBE4AQ14139 1066 aa15.01□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 TTC22Q5TAA0 569 aa15.01□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 OTUD7AQ8TE49 926 aaPredicted RBP15.01□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.01□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 JDP2Q8WYK2 163 aa15.01□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 ZNF408Q9H9D4 720 aa15.01□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 PGAP2Q9UHJ9 254 aa15.01□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 DBNLQ9UJU6 430 aaKnown RBP15.01□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 XDHP47989 1333 aa15□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 IFIT1P09914 478 aaKnown RBP15□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 SKAP1Q86WV1 359 aa15□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 ZNF512BQ96KM6 892 aaPredicted RBP15□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 ADARB2Q9NS39 739 aaKnown RBP15□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 PPEF1O14829 653 aaPredicted RBP14.99□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 ATP5JP18859 108 aa14.99□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 GRIPAP1Q4V328 841 aa14.99□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 CC2D2BQ6DHV5 1058 aa14.99□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 RGMBQ6NW40 437 aa14.99□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 TICAM2Q86XR7 235 aa14.99□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 SP8Q8IXZ3 490 aa14.99□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 PI4K2BQ8TCG2 481 aa14.99□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 CCDC8Q9H0W5 538 aaPredicted RBP14.99□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 TMX4Q9H1E5 349 aaPredicted RBP14.99□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 PODXL2Q9NZ53 605 aa14.99□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 LEMD3Q9Y2U8 911 aa14.99□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 ATP6V0A2Q9Y487 856 aa14.99□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 AK9Q5TCS8 1911 aa14.99□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 CCDC158Q5M9N0 1113 aa14.98□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 FBXO46Q6PJ61 603 aaPredicted RBP14.98□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 XAGE2Q96GT9 111 aa14.98□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 NEUROD6Q96NK8 337 aa14.98□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 DBNDD2Q9BQY9 259 aa14.98□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 LAMA3Q16787 3333 aa14.98□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 EIF5BO60841 1220 aaKnown RBP14.97□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 TIMM10P62072 90 aa14.97□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 C15orf52Q6ZUT6 534 aaKnown RBP14.97□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 CCDC102AQ96A19 550 aa14.97□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 CSRNP1Q96S65 589 aa14.97□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 PSMD1Q99460 953 aa14.97□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 TLR7Q9NYK1 1049 aaKnown RBP14.97□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 GPRC5DQ9NZD1 345 aa14.97□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 POTEFA5A3E0 1075 aa14.96□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 UQCRFS1P1P0C7P4 283 aa14.96□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 GSPT1P15170 499 aaKnown RBP14.96□□□□□ -0.01
CACNA1C-IT3-201ENST00000542680 ATP2B4P23634 1241 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms