RNA–Protein interactions for RNA: ENST00000542287.6

ATXN2-215, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-215ENST00000542287 ZNF589Q86UQ0 364 aaPredicted RBP6.97□□□□□ -1.29
ATXN2-215ENST00000542287 SP8Q8IXZ3 490 aa6.97□□□□□ -1.29
ATXN2-215ENST00000542287 FAM89AQ96GI7 184 aa6.97□□□□□ -1.29
ATXN2-215ENST00000542287 GPATCH3Q96I76 525 aa6.97□□□□□ -1.29
ATXN2-215ENST00000542287 GRPEL1Q9HAV7 217 aa6.97□□□□□ -1.29
ATXN2-215ENST00000542287 FBXO3Q9UK99 471 aa6.97□□□□□ -1.29
ATXN2-215ENST00000542287 ZC3H4Q9UPT8 1303 aaKnown RBP6.96□□□□□ -1.29
ATXN2-215ENST00000542287 A0A0G2JLW4 131 aa6.96□□□□□ -1.3
ATXN2-215ENST00000542287 EPB41L2O43491 1005 aaKnown RBP6.96□□□□□ -1.3
ATXN2-215ENST00000542287 BRD1O95696 1058 aa6.96□□□□□ -1.3
ATXN2-215ENST00000542287 CASTP20810 708 aaKnown RBP6.96□□□□□ -1.3
ATXN2-215ENST00000542287 KLHL40Q2TBA0 621 aa6.96□□□□□ -1.3
ATXN2-215ENST00000542287 TNNI3KQ59H18 835 aa6.96□□□□□ -1.3
ATXN2-215ENST00000542287 DDX46Q7L014 1031 aaKnown RBP6.96□□□□□ -1.3
ATXN2-215ENST00000542287 TTLL11Q8NHH1 800 aa6.96□□□□□ -1.3
ATXN2-215ENST00000542287 GPT2Q8TD30 523 aa6.96□□□□□ -1.3
ATXN2-215ENST00000542287 DBNDD2Q9BQY9 259 aa6.96□□□□□ -1.3
ATXN2-215ENST00000542287 FPGT-TNNI3KV9GXZ4 949 aa6.96□□□□□ -1.3
ATXN2-215ENST00000542287 CCDC171Q6TFL3 1326 aa6.96□□□□□ -1.3
ATXN2-215ENST00000542287 GOLGA6L22H0YM25 854 aa6.96□□□□□ -1.3
ATXN2-215ENST00000542287 NECTIN1Q15223 517 aa6.96□□□□□ -1.3
ATXN2-215ENST00000542287 SLFNL1Q499Z3 407 aa6.96□□□□□ -1.3
ATXN2-215ENST00000542287 FSD1Q9BTV5 496 aa6.96□□□□□ -1.3
ATXN2-215ENST00000542287 RTFDC1Q9BY42 306 aaPredicted RBP6.96□□□□□ -1.3
ATXN2-215ENST00000542287 RBM27Q9P2N5 1060 aaKnown RBP6.96□□□□□ -1.3
ATXN2-215ENST00000542287 CHMP3Q9Y3E7 222 aa6.96□□□□□ -1.3
ATXN2-215ENST00000542287 PSME4Q14997 1843 aa6.95□□□□□ -1.3
ATXN2-215ENST00000542287 PPEF1O14829 653 aaPredicted RBP6.95□□□□□ -1.3
ATXN2-215ENST00000542287 CHRNA5P30532 468 aa6.95□□□□□ -1.3
ATXN2-215ENST00000542287 SKOR2Q2VWA4 1001 aaPredicted RBP6.95□□□□□ -1.3
ATXN2-215ENST00000542287 CAVIN1Q6NZI2 390 aaKnown RBP6.95□□□□□ -1.3
ATXN2-215ENST00000542287 C3orf67Q6ZVT6 689 aa6.95□□□□□ -1.3
ATXN2-215ENST00000542287 RTKN2Q8IZC4 609 aa6.95□□□□□ -1.3
ATXN2-215ENST00000542287 INTS4Q96HW7 963 aaKnown RBP6.95□□□□□ -1.3
ATXN2-215ENST00000542287 ZNF594Q96JF6 807 aaPredicted RBP6.95□□□□□ -1.3
ATXN2-215ENST00000542287 JAKMIP1Q96N16 626 aaKnown RBP6.95□□□□□ -1.3
ATXN2-215ENST00000542287 CDC5LQ99459 802 aaKnown RBP6.95□□□□□ -1.3
ATXN2-215ENST00000542287 PSMD1Q99460 953 aa6.95□□□□□ -1.3
ATXN2-215ENST00000542287 ATP6V0A2Q9Y487 856 aa6.95□□□□□ -1.3
ATXN2-215ENST00000542287 RBM8AQ9Y5S9 174 aaKnown RBP6.95□□□□□ -1.3
ATXN2-215ENST00000542287 COL4A1P02462 1669 aa6.95□□□□□ -1.3
ATXN2-215ENST00000542287 RPAP1Q9BWH6 1393 aaPredicted RBP6.95□□□□□ -1.3
ATXN2-215ENST00000542287 HCLS1P14317 486 aaPredicted RBP6.95□□□□□ -1.3
ATXN2-215ENST00000542287 NCLP19338 710 aaKnown RBP6.95□□□□□ -1.3
ATXN2-215ENST00000542287 ST3GAL1Q11201 340 aa6.95□□□□□ -1.3
ATXN2-215ENST00000542287 CCDC93Q567U6 631 aa6.95□□□□□ -1.3
ATXN2-215ENST00000542287 SUPT20HQ8NEM7 779 aa6.95□□□□□ -1.3
ATXN2-215ENST00000542287 TCEANC2Q96MN5 208 aa6.95□□□□□ -1.3
ATXN2-215ENST00000542287 GDPD2Q9HCC8 539 aa6.95□□□□□ -1.3
ATXN2-215ENST00000542287 MRE11P49959 708 aa6.95□□□□□ -1.3
ATXN2-215ENST00000542287 ATG9AQ7Z3C6 839 aa6.95□□□□□ -1.3
ATXN2-215ENST00000542287 RUFY2Q8WXA3 655 aa6.95□□□□□ -1.3
ATXN2-215ENST00000542287 SEC62Q99442 399 aaKnown RBP6.95□□□□□ -1.3
ATXN2-215ENST00000542287 MED23Q9ULK4 1368 aa6.95□□□□□ -1.3
ATXN2-215ENST00000542287 ZNF609O15014 1411 aa6.94□□□□□ -1.3
ATXN2-215ENST00000542287 FAM177BA6PVY3 158 aa6.94□□□□□ -1.3
ATXN2-215ENST00000542287 LRRC24Q50LG9 513 aa6.94□□□□□ -1.3
ATXN2-215ENST00000542287 CREB3L3Q68CJ9 461 aa6.94□□□□□ -1.3
ATXN2-215ENST00000542287 MAP4K1Q92918 833 aa6.94□□□□□ -1.3
ATXN2-215ENST00000542287 BSDC1Q9NW68 430 aaPredicted RBP6.94□□□□□ -1.3
ATXN2-215ENST00000542287 ANKRD18BA2A2Z9 1011 aa6.94□□□□□ -1.3
ATXN2-215ENST00000542287 YBX3P16989 372 aaKnown RBP eCLIP6.94□□□□□ -1.3
ATXN2-215ENST00000542287 TIMM10P62072 90 aa6.94□□□□□ -1.3
ATXN2-215ENST00000542287 FKBP4Q02790 459 aaKnown RBP eCLIP6.94□□□□□ -1.3
ATXN2-215ENST00000542287 CCDC129Q6ZRS4 1044 aa6.94□□□□□ -1.3
ATXN2-215ENST00000542287 KCNB2Q92953 911 aa6.94□□□□□ -1.3
ATXN2-215ENST00000542287 ZNF622Q969S3 477 aaKnown RBP eCLIP6.94□□□□□ -1.32e-7■■□□□ 12.6
ATXN2-215ENST00000542287 DNAJC2Q99543 621 aaKnown RBP6.94□□□□□ -1.3
ATXN2-215ENST00000542287 PUS3Q9BZE2 481 aaKnown RBP6.94□□□□□ -1.3
ATXN2-215ENST00000542287 ZNF646O15015 1829 aaPredicted RBP6.94□□□□□ -1.3
ATXN2-215ENST00000542287 SLC27A2O14975 620 aa6.94□□□□□ -1.3
ATXN2-215ENST00000542287 C15orf52Q6ZUT6 534 aaKnown RBP6.94□□□□□ -1.3
ATXN2-215ENST00000542287 SYNE4Q8N205 404 aa6.94□□□□□ -1.3
ATXN2-215ENST00000542287 CCDC85AQ96PX6 553 aaPredicted RBP6.94□□□□□ -1.3
ATXN2-215ENST00000542287 ZSWIM6Q9HCJ5 1215 aa6.94□□□□□ -1.3
ATXN2-215ENST00000542287 SNRKQ9NRH2 765 aa6.94□□□□□ -1.3
ATXN2-215ENST00000542287 TMEM63CQ9P1W3 806 aa6.94□□□□□ -1.3
ATXN2-215ENST00000542287 CIAO1O76071 339 aa6.93□□□□□ -1.3
ATXN2-215ENST00000542287 TPM2P07951 284 aa6.93□□□□□ -1.3
ATXN2-215ENST00000542287 ATP5JP18859 108 aa6.93□□□□□ -1.3
ATXN2-215ENST00000542287 PTMSP20962 102 aa6.93□□□□□ -1.3
ATXN2-215ENST00000542287 RPS8P62241 208 aaKnown RBP6.93□□□□□ -1.3
ATXN2-215ENST00000542287 ZSCAN23Q3MJ62 389 aa6.93□□□□□ -1.3
ATXN2-215ENST00000542287 ANKRD18AQ8IVF6 992 aa6.93□□□□□ -1.3
ATXN2-215ENST00000542287 CCDC83Q8IWF9 413 aa6.93□□□□□ -1.3
ATXN2-215ENST00000542287 ANKRD2Q9GZV1 360 aa6.93□□□□□ -1.3
ATXN2-215ENST00000542287 LIMCH1Q9UPQ0 1083 aa6.93□□□□□ -1.3
ATXN2-215ENST00000542287 TAF1P21675 1872 aa6.93□□□□□ -1.3
ATXN2-215ENST00000542287 ME3Q16798 604 aa6.93□□□□□ -1.3
ATXN2-215ENST00000542287 SMAP1Q8IYB5 467 aaPredicted RBP6.93□□□□□ -1.3
ATXN2-215ENST00000542287 NECAB1Q8N987 351 aa6.93□□□□□ -1.3
ATXN2-215ENST00000542287 TMX4Q9H1E5 349 aaPredicted RBP6.93□□□□□ -1.3
ATXN2-215ENST00000542287 PDRG1Q9NUG6 133 aa6.93□□□□□ -1.3
ATXN2-215ENST00000542287 WDR90Q96KV7 1748 aa6.93□□□□□ -1.3
ATXN2-215ENST00000542287 TAF5LO75529 589 aa6.92□□□□□ -1.3
ATXN2-215ENST00000542287 IGHMBP2P38935 993 aaKnown RBP6.92□□□□□ -1.3
ATXN2-215ENST00000542287 KCNJ4P48050 445 aa6.92□□□□□ -1.3
ATXN2-215ENST00000542287 IFIT5Q13325 482 aaKnown RBP6.92□□□□□ -1.3
ATXN2-215ENST00000542287 NEUROD6Q96NK8 337 aa6.92□□□□□ -1.3
ATXN2-215ENST00000542287 TPCN1Q9ULQ1 816 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms