RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 ARAP2Q8WZ64 1704 aa20.54■□□□□ 0.88
TMEM50B-210ENST00000542230 NPHP1O15259 732 aa20.54■□□□□ 0.88
TMEM50B-210ENST00000542230 RPS8P62241 208 aaKnown RBP20.54■□□□□ 0.88
TMEM50B-210ENST00000542230 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.54■□□□□ 0.881e-7■■□□□ 11.8
TMEM50B-210ENST00000542230 DENND2AQ9ULE3 1009 aa20.54■□□□□ 0.88
TMEM50B-210ENST00000542230 GJB2P29033 226 aa20.53■□□□□ 0.88
TMEM50B-210ENST00000542230 KRT32Q14532 448 aa20.53■□□□□ 0.88
TMEM50B-210ENST00000542230 COL24A1Q17RW2 1714 aa20.53■□□□□ 0.88
TMEM50B-210ENST00000542230 TICAM2Q86XR7 235 aa20.53■□□□□ 0.88
TMEM50B-210ENST00000542230 MAGEB6Q8N7X4 407 aa20.53■□□□□ 0.88
TMEM50B-210ENST00000542230 SMC3Q9UQE7 1217 aa20.53■□□□□ 0.88
TMEM50B-210ENST00000542230 RGL2O15211 777 aa20.53■□□□□ 0.88
TMEM50B-210ENST00000542230 SYT1P21579 422 aa20.53■□□□□ 0.88
TMEM50B-210ENST00000542230 TTF1Q15361 905 aaPredicted RBP20.53■□□□□ 0.88
TMEM50B-210ENST00000542230 GPHNQ9NQX3 736 aaPredicted RBP20.53■□□□□ 0.88
TMEM50B-210ENST00000542230 GYS1P13807 737 aa20.52■□□□□ 0.88
TMEM50B-210ENST00000542230 LRRFIP1Q32MZ4 808 aaKnown RBP20.52■□□□□ 0.88
TMEM50B-210ENST00000542230 BRF1Q92994 677 aa20.52■□□□□ 0.88
TMEM50B-210ENST00000542230 TNRC6CQ9HCJ0 1690 aaKnown RBP20.52■□□□□ 0.88
TMEM50B-210ENST00000542230 LAMA4Q16363 1823 aa20.52■□□□□ 0.88
TMEM50B-210ENST00000542230 ZSCAN31Q96LW9 406 aaPredicted RBP20.52■□□□□ 0.88
TMEM50B-210ENST00000542230 SH2B1Q9NRF2 756 aaPredicted RBP20.52■□□□□ 0.88
TMEM50B-210ENST00000542230 LMBRD1Q9NUN5 540 aa20.51■□□□□ 0.87
TMEM50B-210ENST00000542230 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.51■□□□□ 0.87
TMEM50B-210ENST00000542230 PRPF40AO75400 957 aaKnown RBP20.51■□□□□ 0.87
TMEM50B-210ENST00000542230 UBE3CQ15386 1083 aa20.51■□□□□ 0.87
TMEM50B-210ENST00000542230 FAM84BQ96KN1 310 aaPredicted RBP20.51■□□□□ 0.87
TMEM50B-210ENST00000542230 NBPF3Q9H094 633 aa20.51■□□□□ 0.87
TMEM50B-210ENST00000542230 ALDH8A1Q9H2A2 487 aaPredicted RBP20.51■□□□□ 0.87
TMEM50B-210ENST00000542230 COL1A1P02452 1464 aaPredicted RBP20.51■□□□□ 0.87
TMEM50B-210ENST00000542230 TXNRD1Q16881 649 aa20.5■□□□□ 0.87
TMEM50B-210ENST00000542230 TXNRD3Q86VQ6 643 aa20.5■□□□□ 0.87
TMEM50B-210ENST00000542230 TFCP2L1Q9NZI6 479 aa20.5■□□□□ 0.87
TMEM50B-210ENST00000542230 UBR3Q6ZT12 1888 aa20.5■□□□□ 0.87
TMEM50B-210ENST00000542230 EXOSC10Q01780 885 aaKnown RBP20.5■□□□□ 0.87
TMEM50B-210ENST00000542230 DHX32Q7L7V1 743 aaKnown RBP20.5■□□□□ 0.87
TMEM50B-210ENST00000542230 IL27Q8NEV9 243 aa20.5■□□□□ 0.87
TMEM50B-210ENST00000542230 GDPD2Q9HCC8 539 aa20.5■□□□□ 0.87
TMEM50B-210ENST00000542230 PPFIA3O75145 1194 aa20.49■□□□□ 0.87
TMEM50B-210ENST00000542230 APOBRQ0VD83 1088 aa20.49■□□□□ 0.87
TMEM50B-210ENST00000542230 PRR5LQ6MZQ0 368 aa20.49■□□□□ 0.87
TMEM50B-210ENST00000542230 ZSCAN25Q6NSZ9 544 aa20.49■□□□□ 0.87
TMEM50B-210ENST00000542230 ADGRA1Q86SQ6 560 aa20.49■□□□□ 0.87
TMEM50B-210ENST00000542230 CNBD1Q8NA66 436 aa20.49■□□□□ 0.87
TMEM50B-210ENST00000542230 ARMT1Q9H993 441 aa20.49■□□□□ 0.87
TMEM50B-210ENST00000542230 INCENPQ9NQS7 918 aa20.49■□□□□ 0.87
TMEM50B-210ENST00000542230 CARMIL3Q8ND23 1372 aa20.49■□□□□ 0.87
TMEM50B-210ENST00000542230 A0A1B0GUL6 1792 aa20.49■□□□□ 0.87
TMEM50B-210ENST00000542230 PRKAB2O43741 272 aa20.49■□□□□ 0.87
TMEM50B-210ENST00000542230 APPP05067 770 aa20.49■□□□□ 0.87
TMEM50B-210ENST00000542230 STRBPQ96SI9 672 aaKnown RBP20.49■□□□□ 0.87
TMEM50B-210ENST00000542230 ABCF2Q9UG63 623 aa20.49■□□□□ 0.87
TMEM50B-210ENST00000542230 ZNF804BA4D1E1 1349 aa20.48■□□□□ 0.87
TMEM50B-210ENST00000542230 STX6O43752 255 aa20.48■□□□□ 0.87
TMEM50B-210ENST00000542230 JAK2O60674 1132 aa20.48■□□□□ 0.87
TMEM50B-210ENST00000542230 MBD4O95243 580 aa20.48■□□□□ 0.87
TMEM50B-210ENST00000542230 UBE4AQ14139 1066 aa20.48■□□□□ 0.87
TMEM50B-210ENST00000542230 ANKRD1Q15327 319 aa20.48■□□□□ 0.87
TMEM50B-210ENST00000542230 MIGA1Q8NAN2 632 aa20.48■□□□□ 0.87
TMEM50B-210ENST00000542230 MAP3K12Q12852 859 aa20.48■□□□□ 0.87
TMEM50B-210ENST00000542230 SLC27A3Q5K4L6 730 aa20.48■□□□□ 0.87
TMEM50B-210ENST00000542230 NSFL1CQ9UNZ2 370 aaKnown RBP20.48■□□□□ 0.87
TMEM50B-210ENST00000542230 JAG2Q9Y219 1238 aa20.48■□□□□ 0.87
TMEM50B-210ENST00000542230 RBM6P78332 1123 aaKnown RBP20.47■□□□□ 0.87
TMEM50B-210ENST00000542230 FGD1P98174 961 aa20.47■□□□□ 0.87
TMEM50B-210ENST00000542230 AIDAQ96BJ3 306 aa20.47■□□□□ 0.87
TMEM50B-210ENST00000542230 LRP2BPQ9P2M1 347 aa20.47■□□□□ 0.87
TMEM50B-210ENST00000542230 IMMTQ16891 758 aaKnown RBP20.46■□□□□ 0.87
TMEM50B-210ENST00000542230 ZNF827Q17R98 1081 aa20.46■□□□□ 0.87
TMEM50B-210ENST00000542230 EPB41L4AQ9HCS5 686 aaPredicted RBP20.46■□□□□ 0.87
TMEM50B-210ENST00000542230 WDR33Q9C0J8 1336 aaKnown RBP20.46■□□□□ 0.87
TMEM50B-210ENST00000542230 GOLGA6L22H0YM25 854 aa20.46■□□□□ 0.87
TMEM50B-210ENST00000542230 DDR1Q08345 913 aa20.46■□□□□ 0.87
TMEM50B-210ENST00000542230 TBC1D10CQ8IV04 446 aa20.46■□□□□ 0.87
TMEM50B-210ENST00000542230 LCORLQ8N3X6 602 aa20.46■□□□□ 0.87
TMEM50B-210ENST00000542230 GPR101Q96P66 508 aaPredicted RBP20.46■□□□□ 0.87
TMEM50B-210ENST00000542230 DDX49Q9Y6V7 483 aaKnown RBP20.46■□□□□ 0.87
TMEM50B-210ENST00000542230 TCHHQ07283 1943 aa20.46■□□□□ 0.87
TMEM50B-210ENST00000542230 ZSCAN22P10073 491 aaPredicted RBP20.45■□□□□ 0.86
TMEM50B-210ENST00000542230 ADRA2BP18089 450 aa20.45■□□□□ 0.86
TMEM50B-210ENST00000542230 SCRN1Q12765 414 aa20.45■□□□□ 0.86
TMEM50B-210ENST00000542230 VPS37DQ86XT2 251 aa20.45■□□□□ 0.86
TMEM50B-210ENST00000542230 ZNF384Q8TF68 577 aa20.45■□□□□ 0.86
TMEM50B-210ENST00000542230 CTNNA3Q9UI47 895 aa20.45■□□□□ 0.86
TMEM50B-210ENST00000542230 MTMR6Q9Y217 621 aa20.45■□□□□ 0.86
TMEM50B-210ENST00000542230 SERPINB2P05120 415 aa20.45■□□□□ 0.86
TMEM50B-210ENST00000542230 GPT2Q8TD30 523 aa20.45■□□□□ 0.86
TMEM50B-210ENST00000542230 GTF3C6Q969F1 213 aa20.45■□□□□ 0.86
TMEM50B-210ENST00000542230 NCOA5Q9HCD5 579 aaKnown RBP20.45■□□□□ 0.86
TMEM50B-210ENST00000542230 ZNF213O14771 459 aa20.44■□□□□ 0.86
TMEM50B-210ENST00000542230 ANTXR2P58335 489 aa20.44■□□□□ 0.86
TMEM50B-210ENST00000542230 CCT2P78371 535 aaKnown RBP20.44■□□□□ 0.86
TMEM50B-210ENST00000542230 TACC3Q9Y6A5 838 aa20.44■□□□□ 0.86
TMEM50B-210ENST00000542230 DOCK2Q92608 1830 aa20.44■□□□□ 0.86
TMEM50B-210ENST00000542230 FBXO33Q7Z6M2 555 aa20.44■□□□□ 0.86
TMEM50B-210ENST00000542230 NAP1L2Q9ULW6 460 aaPredicted RBP20.44■□□□□ 0.86
TMEM50B-210ENST00000542230 VPS37CA5D8V6 355 aaPredicted RBP20.43■□□□□ 0.86
TMEM50B-210ENST00000542230 SMIM22K7EJ46 135 aa20.43■□□□□ 0.86
TMEM50B-210ENST00000542230 APBA3O96018 575 aa20.43■□□□□ 0.86
TMEM50B-210ENST00000542230 HMGB1P09429 215 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 626.8 ms