RNA–Protein interactions for RNA: ENST00000540999.5

TCF4-207, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-207ENST00000540999 PPP4R3CPQ6ZMV5 832 aa10.34□□□□□ -0.75
TCF4-207ENST00000540999 LRP10Q7Z4F1 713 aa10.34□□□□□ -0.75
TCF4-207ENST00000540999 CHD1LQ86WJ1 897 aa10.34□□□□□ -0.75
TCF4-207ENST00000540999 NGLY1Q96IV0 654 aa10.34□□□□□ -0.75
TCF4-207ENST00000540999 HYPKQ9NX55 129 aa10.34□□□□□ -0.75
TCF4-207ENST00000540999 BIN2Q9UBW5 565 aaPredicted RBP10.34□□□□□ -0.75
TCF4-207ENST00000540999 NBPF26B4DH59 902 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 GNAI2P04899 355 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 MRE11P49959 708 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 C4orf46Q504U0 113 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 ZNF394Q53GI3 561 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 NBPF14Q5TI25 921 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 C16orf71Q8IYS4 520 aaPredicted RBP10.33□□□□□ -0.76
TCF4-207ENST00000540999 NBPF15Q8N660 670 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 KLF15Q9UIH9 416 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 KCPQ6ZWJ8 1503 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 SPATA31A5Q5VU36 1347 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 SPATA31A7Q8IWB4 1347 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 SEC24BO95487 1268 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 TGFB3P10600 412 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 HSPA1LP34931 641 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 LARP1BQ659C4 914 aaKnown RBP10.33□□□□□ -0.76
TCF4-207ENST00000540999 KSR2Q6VAB6 950 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 TAX1BP1Q86VP1 789 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 C17orf50Q8WW18 174 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 DUSP9Q99956 384 aaKnown RBP10.33□□□□□ -0.76
TCF4-207ENST00000540999 DCTPP1Q9H773 170 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 UPF2Q9HAU5 1272 aaKnown RBP10.33□□□□□ -0.76
TCF4-207ENST00000540999 SLIT2O94813 1529 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 EP400Q96L91 3159 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 WNK3Q9BYP7 1800 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 N4BP2Q86UW6 1770 aaPredicted RBP10.33□□□□□ -0.76
TCF4-207ENST00000540999 UBR2Q8IWV8 1755 aa10.33□□□□□ -0.76
TCF4-207ENST00000540999 HMMRO75330 724 aa10.32□□□□□ -0.76
TCF4-207ENST00000540999 EIF3JO75822 258 aaKnown RBP10.32□□□□□ -0.76
TCF4-207ENST00000540999 CCDC175P0C221 793 aa10.32□□□□□ -0.76
TCF4-207ENST00000540999 PRIM1P49642 420 aaKnown RBP10.32□□□□□ -0.76
TCF4-207ENST00000540999 RPAP2Q8IXW5 612 aaPredicted RBP10.32□□□□□ -0.76
TCF4-207ENST00000540999 GOLGA6L1Q8N7Z2 621 aa10.32□□□□□ -0.76
TCF4-207ENST00000540999 TDRD7Q8NHU6 1098 aaKnown RBP10.32□□□□□ -0.76
TCF4-207ENST00000540999 TATDN2Q93075 761 aa10.32□□□□□ -0.76
TCF4-207ENST00000540999 ACSBG1Q96GR2 724 aa10.32□□□□□ -0.76
TCF4-207ENST00000540999 ATG3Q9NT62 314 aa10.32□□□□□ -0.76
TCF4-207ENST00000540999 KIAA1522Q9P206 1035 aaPredicted RBP10.32□□□□□ -0.76
TCF4-207ENST00000540999 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.32□□□□□ -0.76
TCF4-207ENST00000540999 TMCO5BA8MYB1 307 aa10.32□□□□□ -0.76
TCF4-207ENST00000540999 GOLGA6L6A8MZA4 724 aa10.32□□□□□ -0.76
TCF4-207ENST00000540999 UBTFL1P0CB47 393 aaPredicted RBP10.32□□□□□ -0.76
TCF4-207ENST00000540999 XBP1P17861 261 aa10.32□□□□□ -0.76
TCF4-207ENST00000540999 DDB1Q16531 1140 aa10.32□□□□□ -0.76
TCF4-207ENST00000540999 FAM98CQ17RN3 349 aaKnown RBP10.32□□□□□ -0.76
TCF4-207ENST00000540999 IFNLR1Q8IU57 520 aaPredicted RBP10.32□□□□□ -0.76
TCF4-207ENST00000540999 MARCH10Q8NA82 808 aaPredicted RBP10.32□□□□□ -0.76
TCF4-207ENST00000540999 OTUD7AQ8TE49 926 aaPredicted RBP10.32□□□□□ -0.76
TCF4-207ENST00000540999 JARID2Q92833 1246 aaPredicted RBP10.32□□□□□ -0.76
TCF4-207ENST00000540999 GCC1Q96CN9 775 aa10.32□□□□□ -0.76
TCF4-207ENST00000540999 TSPYL2Q9H2G4 693 aaPredicted RBP10.32□□□□□ -0.76
TCF4-207ENST00000540999 LRP6O75581 1613 aa10.32□□□□□ -0.76
TCF4-207ENST00000540999 JCADQ9P266 1359 aa10.32□□□□□ -0.76
TCF4-207ENST00000540999 PXDNLA1KZ92 1463 aa10.32□□□□□ -0.76
TCF4-207ENST00000540999 BCL9LQ86UU0 1499 aa10.32□□□□□ -0.76
TCF4-207ENST00000540999 PAPPAQ13219 1627 aa10.31□□□□□ -0.76
TCF4-207ENST00000540999 SLFN14P0C7P3 912 aa10.31□□□□□ -0.76
TCF4-207ENST00000540999 POU5F1Q01860 360 aaKnown RBP10.31□□□□□ -0.76
TCF4-207ENST00000540999 TTC19Q6DKK2 380 aaPredicted RBP10.31□□□□□ -0.76
TCF4-207ENST00000540999 RIC3Q7Z5B4 369 aa10.31□□□□□ -0.76
TCF4-207ENST00000540999 PRPF38AQ8NAV1 312 aaKnown RBP10.31□□□□□ -0.76
TCF4-207ENST00000540999 TRERF1Q96PN7 1200 aa10.31□□□□□ -0.76
TCF4-207ENST00000540999 RBM42Q9BTD8 480 aaKnown RBP10.31□□□□□ -0.76
TCF4-207ENST00000540999 POLR3CQ9BUI4 534 aaPredicted RBP10.31□□□□□ -0.76
TCF4-207ENST00000540999 EXOC6BQ9Y2D4 811 aa10.31□□□□□ -0.76
TCF4-207ENST00000540999 SHTN1A0MZ66 631 aa10.31□□□□□ -0.76
TCF4-207ENST00000540999 IGKV5-2P06315 115 aa10.31□□□□□ -0.76
TCF4-207ENST00000540999 GNAI3P08754 354 aa10.31□□□□□ -0.76
TCF4-207ENST00000540999 IRX1P78414 480 aaPredicted RBP10.31□□□□□ -0.76
TCF4-207ENST00000540999 SASS6Q6UVJ0 657 aa10.31□□□□□ -0.76
TCF4-207ENST00000540999 ZSCAN30Q86W11 494 aa10.31□□□□□ -0.76
TCF4-207ENST00000540999 UNC5CLQ8IV45 518 aa10.31□□□□□ -0.76
TCF4-207ENST00000540999 UHMK1Q8TAS1 419 aaKnown RBP10.31□□□□□ -0.76
TCF4-207ENST00000540999 CCDC47Q96A33 483 aaKnown RBP10.31□□□□□ -0.76
TCF4-207ENST00000540999 SLC4A9Q96Q91 983 aa10.31□□□□□ -0.76
TCF4-207ENST00000540999 BLOC1S6Q9UL45 172 aa10.31□□□□□ -0.76
TCF4-207ENST00000540999 TBC1D2BQ9UPU7 963 aa10.31□□□□□ -0.76
TCF4-207ENST00000540999 JRKLQ9Y4A0 524 aa10.31□□□□□ -0.76
TCF4-207ENST00000540999 TTLL7Q6ZT98 887 aa10.3□□□□□ -0.76
TCF4-207ENST00000540999 DNAJC10Q8IXB1 793 aa10.3□□□□□ -0.76
TCF4-207ENST00000540999 MMTAG2Q9BU76 263 aaKnown RBP10.3□□□□□ -0.76
TCF4-207ENST00000540999 TMOD4Q9NZQ9 345 aa10.3□□□□□ -0.76
TCF4-207ENST00000540999 ZNF330Q9Y3S2 320 aaPredicted RBP10.3□□□□□ -0.76
TCF4-207ENST00000540999 TNS2Q63HR2 1409 aa10.3□□□□□ -0.76
TCF4-207ENST00000540999 ATP5J2-PTCD1G3V325 749 aa10.3□□□□□ -0.76
TCF4-207ENST00000540999 MSNP26038 577 aaKnown RBP10.3□□□□□ -0.76
TCF4-207ENST00000540999 TRAF1Q13077 416 aa10.3□□□□□ -0.76
TCF4-207ENST00000540999 INF2Q27J81 1249 aa10.3□□□□□ -0.76
TCF4-207ENST00000540999 WWC2Q6AWC2 1192 aa10.3□□□□□ -0.76
TCF4-207ENST00000540999 ANKRD13DQ6ZTN6 518 aa10.3□□□□□ -0.76
TCF4-207ENST00000540999 ARL10Q8N8L6 244 aa10.3□□□□□ -0.76
TCF4-207ENST00000540999 MYD88Q99836 296 aa10.3□□□□□ -0.76
TCF4-207ENST00000540999 IQCGQ9H095 443 aaKnown RBP10.3□□□□□ -0.76
TCF4-207ENST00000540999 CIZ1Q9ULV3 898 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms